| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,834,564 | G→A | Q456* (CAA→TAA) | yicJ ← | putative xyloside transporter YicJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,834,564 | 0 | G | A | 94.5% | 199.6 / 0.9 | 73 | Q456* (CAA→TAA) | yicJ | putative xyloside transporter YicJ |
| Reads supporting (aligned to +/- strand): ref base G (2/2); new base A (40/29); total (42/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
CTGAAAATGCTCAATCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTGAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCC > NC_000913/3834319‑3834808 | cTGAAAATGCTCAATCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAgg > 1:192414/1‑251 (MQ=255) gAAAATGCTCAATCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGt < 1:207783/250‑1 (MQ=255) aaaaTGCTCAATCCGCACACCGACAATACCGTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTTAATCAAATTGAGGCCAGGGTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGa < 2:61115/251‑1 (MQ=255) aTCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTg > 2:232838/1‑251 (MQ=255) cGCACACCGACAAGACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCTCATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCa < 1:453472/251‑1 (MQ=255) gCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCCTTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGACTCAACCAGTTTCCATCGCTCATTTTCATTGCCGTTCCTACGTTCTGCACTT‑CTTGAGAGGTGAATTGTTG‑CTGGcc > 1:285343/1‑249 (MQ=255) cacCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACgg > 2:279564/1‑251 (MQ=255) gacaatcccgtccttgggggAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCATGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAActgagtt < 2:627163/235‑7 (MQ=255) gACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACATCGAACACCTGAAGCGGGTGACCCAAATTGAGGCCAGGTTGCATCCACCAGTTTACATCGCCAATTTTCATTGCCGTACCTTAGTTCTGAACTT‑CTTAGGAGGTGCATTTTTG‑CTGGCAACGGCGtt > 2:274631/1‑251 (MQ=255) aaaTACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCTTCGCTAATTTGCATTGCCGTTCCTTATTTCTGCACGT‑CTTAAGAGGTGAATTGTTG‑CTGTCAACGGCGTTTa < 1:223864/250‑1 (MQ=255) ccTTCCTGGGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTAGCCTGCTGTTCAGCCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTg < 1:458156/251‑1 (MQ=255) tgtgGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTGAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCttatcc > 2:207465/1‑244 (MQ=255) gtgGGGAGAAAAAGCGCAACGGAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCTCGCACATCACGTGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCCTTTTCCATCGCTAATTTTCATTGCCGTTCCTTATTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGTCATCGGCGTGTACCCTGAGCCa < 2:47806/249‑1 (MQ=255) gtgagaAAAAGCGCAACGTAAATAAAGGCGTATCAATCTGCCAGGAACGTTCACGCACATCACGGGGGGAAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCAAACACCTGAAGCGGGGGAATCAAATTGCGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCTGTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCAAGCTGt > 2:439420/3‑251 (MQ=255) aaaaGCGCAACGTAAATAAAGGCGTCTCAAGATGCCAGGTACGTTCACGCACATCACGGGAAGCAGCATAGACCACCATTTCATTATCCTGCTCACCTACCTAGAACACCTGATGCGGGTGAATCAAAATAAGGCCAGGTTGAATCAACCAGTTTCCATCGCTACTTTTCATTGCCATTCCTTAGATCAGCACTT‑CTAAAGAGGTGAATTGTTG‑CTGGCAACGGAGTTTAccccgaacacactgttccat > 1:316903/1‑233 (MQ=255) aGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGACCACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCCGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACg > 2:157800/1‑251 (MQ=255) aaataaaGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGTTTTTc > 2:19179/1‑247 (MQ=255) aaGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCgtgaggg > 1:550743/1‑249 (MQ=255) aGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCgtgagtg > 1:439077/1‑250 (MQ=255) gcagtcagttACGTTCACTCACATCACTGGGGGACGCATAGACCGCCATGTCATTATCCTGCTGTGTAATCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAAGCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGTTGAATTGTTG‑CTTGCTACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGGGTCgtgagtgaa < 2:237428/242‑2 (MQ=255) cgtccagtgaCGTTCACGCACATCACGGGTGGCAGCATAGACCACCACTTCATTATCCTGCTGTTGTACCTCGAACACCTGAAGCGGGTGAATCTAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTGAAGAGGTGAATTGTTG‑CTGGCATCGGTGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATCGTGCGTCGTgagtgagt < 2:1058/242‑1 (MQ=255) cTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCAGAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTaagtgagt > 2:130056/1‑251 (MQ=255) aggttcgtccacgctcgtcccGGGGGTCAGCATAGACCACCATTTCATTAGCCTGCTGTACTACCTCGAACACCGTAAGAGGGTGAATCAAATTTAGGATAGGTTGAATCAACCTGTTGCCATCTCTAATTTTCATTGCCGTGCCTTTGTTCTGTACTT‑CTTAATAGGTGAATTGTTG‑CTGGCAACGGCGTTTACACTGTGCCGGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGATtagtag < 2:534026/231‑1 (MQ=255) aGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGagtagt > 1:362305/1‑249 (MQ=255) aGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGtagtag < 1:333661/251‑1 (MQ=255) aGGTAAGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTCCCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGagtagtgg > 2:148098/1‑249 (MQ=255) ttCACGCCCACCACTGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTGCAACCTCGAACACCTGAAGCTGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTATCAGATTGTGCGTCGTTAGTGAGTAGTAGCGTTTa < 2:368283/250‑1 (MQ=255) tCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAg < 1:151565/250‑1 (MQ=255) cACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCg < 2:362305/251‑1 (MQ=255) aTCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTGAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATcg < 1:207465/251‑1 (MQ=255) cACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATcgc < 1:279564/250‑1 (MQ=255) ggggggCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTc > 1:181414/1‑251 (MQ=255) ggggCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAg < 1:98614/251‑1 (MQ=255) ggCAGCATAGACCACCATGTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCATTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCTCGCTCAGCa < 1:471065/251‑1 (MQ=255) ttCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGa < 2:181414/250‑1 (MQ=255) ccttATCCTACTGTTCAACCTCGAACACCTGAAGCTGGTGAATCAAAATGAGGCCATGTTGAATCCACCAGTTTCCATCGCTAATTTTCATTTCCTTTCCTTAGTTCTGCACTT‑CGTAAGATGTGAATTGTTT‑CTGGCAACTGCGTTTACCCTGAGCCAGCGGTTCCATAACGGTTTTCATATTGTGCGTCGTGAGTTAGTAGTAGCTTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGcttgaaca < 2:445184/249‑8 (MQ=255) cagtATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAAc < 1:373294/247‑1 (MQ=255) cATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCCGCAAATAACAGATCGCCGGAAc > 1:577742/1‑250 (MQ=255) aTTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGCGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACa > 1:169106/1‑250 (MQ=255) ccTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCggg > 1:119725/1‑249 (MQ=255) gctgTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGTTAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGGGAAt > 2:15422/1‑251 (MQ=255) gctgTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAt < 1:235953/251‑1 (MQ=255) tCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑ATTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATATCGGGTTTCAGATTGTGAGTCGTGAGTGTGTAGTAGCGGTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAgcgc > 2:500658/1‑251 (MQ=255) cGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCCGGTTCCAGTGCTAATTTTCATTGCCGGTCCTTAGTTCTGCACTT‑CGTGAGAGGTGAATTGTTG‑CTGGCAACGGCGGTTTCCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGGCGGGAGTGAGTAGTAGCGTATAGCGATAATCGCTGTCAGCAAAGAACTGACCGCCGGAACAATCGTGAATAGCGCaataat < 2:285343/250‑1 (MQ=255) cGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCaataat < 1:183322/250‑1 (MQ=255) gAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAatg > 1:636106/1‑250 (MQ=255) gAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAatg > 1:192995/1‑250 (MQ=255) aaCACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAatgat < 1:10646/251‑1 (MQ=255) acacCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAatgatg < 1:157800/251‑1 (MQ=255) cTGAAGCGGGGGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CAGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGAGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCTCCGGAACAATCGTGAATAGAGCAATAATGATGCTa > 2:255582/1‑250 (MQ=255) tgCGGGTGAATCAAATTGCGGCCAGGTTGAATCACCCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGGGAATTGCTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTAAATAGCGCCATAATGATGCTAATCGt > 2:155303/2‑251 (MQ=255) aGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATc < 2:258891/222‑1 (MQ=255) aGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATc > 1:258891/1‑222 (MQ=255) gggTGAATCCAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGgc > 2:31384/1‑251 (MQ=255) ggTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGACGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTCGCGTTTAGCGATCATAGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGCATAGCGCAATAATGATGCTAATCGTGgcg > 1:642543/1‑251 (MQ=255) tGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCt > 1:348937/1‑251 (MQ=255) tCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCa < 2:529734/126‑1 (MQ=255) tCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCa > 1:529734/1‑126 (MQ=255) gAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCtt > 1:340712/1‑251 (MQ=255) ggTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTTGCGCTGTTCTGCGCTTTTTCTGc > 2:115422/1‑251 (MQ=255) gTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGcc < 1:19179/251‑1 (MQ=255) aaTCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGcat > 1:224855/1‑251 (MQ=255) aGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCaat < 1:260552/199‑1 (MQ=255) aGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCaat > 2:260552/1‑199 (MQ=255) gTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGc > 1:663695/1‑251 (MQ=255) gTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTCCCGCATCATATCCGc > 2:540684/1‑251 (MQ=255) gTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGACGGAACAATCGTGAATAGCGCACTAATGATGCAAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGc > 2:535272/1‑251 (MQ=255) tAATTTTCATTGCCGTAACTTAGTACTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAGCGGCGTTTACCCTGAGCCAGATGTTCCATAAGGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGAACGCAGGAAAACTCGTGAATAGCGCAATAATGATGCTAAACGTGGCGATGTTCTGCGCTTGTTCTGCCGCATCATATCCGCCATCAGACAGc > 2:268718/1‑251 (MQ=255) gCCGTTCCTTAGTCCT‑AACTTTCTTAAGAGGT‑AAATGTTGGCGGGCAACGGTGTGTCCCTTGGGCCTGCTGTCCCATAACGTTTTTCGGTTTGTGCGTCGTGAGTGAGTATTAGCTTTTAGCGATAAGCTCGTTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGAAATAATGATGCTAATCGTGGCGCTGTTCTGCCCTTTTTCTGCCGCATCATTTCCGCCATAAGCCAGCATCCAGCCGa < 2:636106/250‑1 (MQ=255) aGTTCTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGcgccg > 1:651647/1‑251 (MQ=255) gtCTGCACTT‑CTTAAGAGGTGACTTGTTG‑CTGGCAAAGGCGTTTACACTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGAAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGACGCTGTTCTGCGCTTTTTCTGCCGAATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCgccgcc > 1:25701/2‑251 (MQ=255) cTGCACTT‑CTTAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGccgccg > 1:337471/1‑250 (MQ=255) ctt‑cttAAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCAGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGcc > 2:620114/1‑251 (MQ=255) | CTGAAAATGCTCAATCCGCACACCGACAATACCTTCCTGTGGGGAGAAAAAGCGCAACGTAAATAAAGGCGTATCAAGCTGCCAGGTACGTTCACGCACATCACGGGGGGCAGCATAGACCACCATTTCATTATCCTGCTGTTCAACCTCGAACACCTGAAGCGGGTGAATCAAATTGAGGCCAGGTTGAATCAACCAGTTTCCATCGCTAATTTTCATTGCCGTTCCTTAGTTCTGCACTT‑CTTGAGAGGTGAATTGTTG‑CTGGCAACGGCGTTTACCCTGAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGTCGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAATAGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCC > NC_000913/3834319‑3834808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |