| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,770,539 | C→T | V281M (GTG→ATG) | yibH ← | inner membrane protein YibH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,770,539 | 0 | C | T | 94.5% | 195.2 / ‑0.9 | 74 | V281M (GTG→ATG) | yibH | inner membrane protein YibH |
| Reads supporting (aligned to +/- strand): ref base C (2/2); new base T (38/31); total (40/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.47e-01 | |||||||||||
CCGCATCACCGAAACATGGCTGAAATGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAC‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATATTTTGCTTCAGTAAGTTGCGCTCTTAAGCTCACAATCTGCGATTGCT > NC_000913/3770297‑3770784 | ccGCATCACCGAAACATGGCTGAAATGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTcc < 1:109829/250‑1 (MQ=255) gCATCACCGAAACATGGCTGAAATGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGGTAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGc > 2:188933/1‑250 (MQ=255) aCCGAAACATGGCTGAAATGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCCGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCatcatc > 2:303269/1‑251 (MQ=255) aCCGAAACATGGCTGAAATGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCatcatc > 1:94048/1‑251 (MQ=255) gAAACATGGCTGAAATGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGGTCCCAGCACA‑CCGGCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGACTGCTAAGAACCGCCTGGCACGACAGGGAAAATACTAGTCAGTTTGCCGGGAAACACCTGCCCAGGGAGCGCGTTAAACAT‑CACTTCAGCCTCATCGcc > 2:551798/1‑251 (MQ=255) tGAAATGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTc > 1:177039/1‑248 (MQ=255) aaaTGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCAAGACAGGTAAAATACTAGTCAGTTTACCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGACAGGTTTCAGACg > 1:42145/1‑251 (MQ=255) aaaTGGTCGGAGTAAACCGCCACCTGGGAGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGATAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCACAGCTAGCGCGTTAAA‑ACTCACTTCCGCATCATCGCCCGGGTTTAGACg > 2:634558/1‑251 (MQ=255) aaTGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACCGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGcatcat > 1:588042/1‑234 (MQ=255) aaTGGTCGGAGAAAACGTCCACCGGGGCGTAGATGCCGACGGTGAAGGCATCGATATCATCGTTAGGGTCCAGTTAAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTTCCCAGGTAGCGCGTTAAACAT‑CACTGCCGcatcat < 2:588042/234‑1 (MQ=255) aTGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCTCGACCGTTAATGATTGCAATACCCCCAGCGCCTGCTAAGAACCGCCTGGCACGGCAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCCTCCCAGGAAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAAACgg > 1:461855/1‑249 (MQ=255) cGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGc > 1:51317/1‑251 (MQ=255) ggAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCg < 1:188933/251‑1 (MQ=255) aaatcGCCCCCTGGGCGAAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCCCA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGttt < 2:303724/247‑1 (MQ=255) ccGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGGCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCACGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGc > 2:511695/1‑251 (MQ=255) ggCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTggg > 1:435981/1‑251 (MQ=255) gCGTGGATGCCGCCGGCAAAGGCATCTATATGATTGATAGGGTCTAGTGCAATGTTTCCCAGCACC‑CCGTCTGTGCCGGTCCCGACCGTTAATGATGTCAATACCCCCTGCGCCTGATAAAAACCGCATGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCACGTTATACAT‑CTCTGCCGCATCATCGCCAGGTTTCAGACGTAACCGCGATTTTTGctcaaattttga < 2:3173/251‑12 (MQ=255) ggTAGATGCCGTCGGTTAAGGTATCTATATCCTCGTTAGGGTCCAGTTCAATGGTTCCTAGCACC‑CCGGCCGTGACGGGCACTACCGTTAATGAATTTACTACCCCCTTCCCCTGAGAAGAACCGCTTGGCACGACAGGTAAAATACTAGTCATTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTGCCGCTTCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCg < 2:569181/250‑1 (MQ=255) gCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTc > 1:430965/1‑251 (MQ=255) cGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCgggg < 1:634558/251‑1 (MQ=255) atcatcGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGttt < 1:463048/189‑1 (MQ=255) atcatcGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGAACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGAAGCGCGTTAAACAT‑CACTTCCGAATCATCGCCAGGttt > 2:463048/1‑189 (MQ=255) catcGTTAGGGTCCAGTTCAATGGTTCCCAGCACC‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAg < 1:551798/251‑1 (MQ=255) catcGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAg < 1:52285/251‑1 (MQ=255) catcGTTAGGGCACAGTTCAATGGGTCCCAG‑ACATCCGTCCGTGTCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGACTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAg < 2:2601/251‑1 (MQ=255) atcGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGa > 1:510399/1‑248 (MQ=255) tAGGGTCCAGTTAAATGGTTCCCAGCAAA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACACCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGGAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGAGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATAGGGCGACAATTTGCCGTTTTTGCTCGGGGGTGTAGACCATc > 2:82309/1‑251 (MQ=255) agattCCAGTTCAAGGTTTCCTCGCACA‑CCGGCCGTTCCGGTCTCGACCGTTAATGATTGCAATTCCCCCTGCGCCTTAAAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CTTTGCCGCAACATCGCCAGGTGTCAGACGGAACAGCGAGTTTTGCCTAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATc < 2:558793/246‑1 (MQ=255) aGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCTGTGAAACACCTGCCCAGGTAGCGCGTTAAACAC‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATc < 1:316310/250‑1 (MQ=255) gTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCg > 1:186319/1‑251 (MQ=255) gTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTAGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAC‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAAt > 1:323745/1‑205 (MQ=255) cAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGAc > 1:345887/1‑251 (MQ=255) tCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGc > 1:443855/1‑249 (MQ=255) gTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCa > 1:92473/1‑250 (MQ=255) ttCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCCGCGGCa > 1:630981/1‑249 (MQ=255) cccAGCACC‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATCCCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAgg < 1:82309/250‑1 (MQ=255) cccAGAACA‑CCGACCGAGCCGGGCACGACCGTTAAAGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAAAAGCGAGTTTTGCCGCAATTGGGCGACAATTTGCAGTTTTTGCTCGAGGATGAAGACCATCACCGGACGAAGCggaagga > 2:601744/1‑245 (MQ=255) ccAGCACA‑CCGTCCGTGCCGGGCACGCCCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAACATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAACCAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGAAACAGCGCGTTTTGCCGAAATTGGGCGCCAATTTGCCGGTTTTGCTCGGGGATGAAGACCACCACCGGCCGCAGCGGCAAGGc > 2:514745/1‑250 (MQ=255) aaacaca‑CCGTCCGTGCCGGGCACGACCGTTACTGATTGCCATACACCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CCCTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGACGAAATTGGACGACAATTTGCCGTTTTTGATCGGGGCTGAAGACCATCACCGGACGCCGCGGAAAGGc > 2:543040/4‑249 (MQ=255) cacccctccctgtccggcctcGACCGTTAATGTTTGCATTACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGGCAGTTTTCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGTGGATTAAGACCATCACCGGGCTCAGCGGTGAGGCAgttg < 2:630981/231‑4 (MQ=255) catccggGCCGGTCCCGACCGTTAATGATTGCAATACCCCCTGCGCCGGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCTGCAAGGCAGCTGCGTAt < 2:430965/249‑1 (MQ=255) gCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTg < 1:514745/251‑1 (MQ=255) cGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGt > 1:108106/1‑250 (MQ=255) gTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGAc < 2:509637/208‑1 (MQ=255) gTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGAc > 1:509637/1‑208 (MQ=255) gATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGt > 1:671264/1‑251 (MQ=255) aTTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTAGGGACCTGGGCGGATCAGTACCTGAGt > 2:463761/1‑250 (MQ=255) ggCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAAGACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAAc < 2:292829/250‑1 (MQ=255) atccccccGGCGCCTTATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑TACTTCCGCATCATCGCCAGGTTTCAGACGGAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGGTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCGGAGTAACggag < 2:51317/248‑4 (MQ=255) aCCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGc < 1:219944/250‑1 (MQ=255) ccccAGCGCCTGAAAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCATGAAACCCCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCAt < 2:177039/251‑1 (MQ=255) ccTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGgc < 1:531001/251‑1 (MQ=255) aaaGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGcgcgcg < 2:135550/250‑1 (MQ=255) aaGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCCGGTAGCGCGTTCAACAT‑CCCTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGTATGAAGACCATCACCGGACACAGAGGCAAGGCAGCTGCGTATGAACCTGGGCGGGTCAGTACCTGAGTAACGTAGCCATTGGTCGgcgaggg > 2:551712/1‑246 (MQ=255) aaGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTAAAACAT‑CACTTCAGCATCATCGCCAGGCTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTACTCGGGGATGAAGACCATCCCCGGACTCAGCGGCTAGGCAGCTGCGTATGCACCTGGGCGGACCAGTCCCTAAGTAACGTCGCCATTGCACAGcgcgcgc > 2:357681/1‑250 (MQ=255) aaCCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACCCCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATg > 1:45159/1‑251 (MQ=255) aaCCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGc < 2:646605/207‑1 (MQ=255) aaCCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGc > 1:646605/1‑207 (MQ=255) ccTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑Gt < 1:163155/251‑1 (MQ=255) cTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTc > 1:341751/1‑251 (MQ=255) gtcactaccggtaaagaattAGTCAGTTGGCCGGGAAACACCGGCCCAGGTAGCGCGATAAACAT‑CACTTCCGCATCATCGCCAGGTTGCAGACGTAACAGCGAGTTGTGCCGAAATTGGGCGACAATTTGCCGGTTTTGCTCGGGGATGAAGACCATCACCGTACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTg < 2:273903/232‑1 (MQ=255) gACAGGAAAAATACTAGGCAGTTTGACGTGCAACACCTGCCCAGGTATCGCGTTAAACAT‑CACTTACGCATCATCGCCAGGTTTCAGACGAAACAGCAAGTTTTGCCGAAATTGGGCGACAATTTACCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGAAGGTACATGGGCGGAACATGACCTGAGTAACGTCGCCATTGCTAGACGAGCGCATGACC‑ATCTGCTCa > 2:125110/1‑250 (MQ=255) ggTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCTCGTTAAACAG‑CACGTCCGCATCATCGCCAGGTTGCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGTGATGAAGACCATCACCGGACGCCGCGGCAAGGCAGCTGCGTATGTACCTGGGAGGATCAGTACCTGATGAACTTATCCATTGCTCGGCGCGCGAATGACA‑GTCTGCGCAAgggt < 2:101750/251‑3 (MQ=255) tAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTtat > 1:537775/1‑251 (MQ=255) aGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATATTTTGCTTCAGt > 1:387215/1‑251 (MQ=255) ccGTGAAACACCTGCCCTGGTAGCGCGTTAAACAT‑CACTTCCGCATCAGCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGTCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATATTTTGCTTCAGTAAGTTg < 2:186319/251‑1 (MQ=255) aacccatGCCCAGGTAGCGCGTGAAACAT‑CACTTCCGCATCATCGCCATGTTTTCGACGTAACAGCTAGTTTTTCCGACAATGGGCGACAATTTTCCGTTTTTGCTCGTGGATGAAGACCATCACCGGTCGCAGCGGCAAGGCAGCTGCGTATGTTCCTTGGCGTATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATAGTTTGCTTCAGTAAGTTGCGctct < 2:540176/245‑1 (MQ=255) cccTGCCCAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTATGACGTAACATCGAGTTGTGCCGAAAGTGGGCGACAAGTTGCCGTTTTTGCTCGGGGATGAAGACCAGCACCGGACGCAGCGGCAAGGCAGCGGCGTAGGTACCTGGGCGGATCAGTGCCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATAGTTTGCTTCAGTAAGTTGCGCTCTTaa < 2:94048/250‑1 (MQ=255) cccAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATATTTTGCTTCAGTAAGTTGCGCTCTTAAGCTc > 1:271162/1‑250 (MQ=255) cccAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATATTTTGCTTCAGTAAGTTGCGCTCTTAAGCTc > 1:497730/1‑250 (MQ=255) ccAGGTAGCGCGTTAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATATTTTGCTTCAGTAAGTTGCGCTCTTAAGCTcac < 1:570485/251‑1 (MQ=255) cgTTAAACAC‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGATGTTTGCCGAAATTGGGCGACAAATTGCCGTTGTTGCTCGGGGCTGAAGACCATCTCCGGACGGAGCGGGAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTGCCTGAGTAACGTTGCCATTGCGCGGCGCGCGAATGACA‑GGCTGCTCAAGGTTATATTTTGCTTCAGTAAGTTGTGCTCTTAAGCTCGCCATCTg < 2:306940/247‑1 (MQ=255) ttAAACAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCCAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAAT‑ACAAGTCTGCTCACGGTTATATTTTGCTTCAGTTAGTTGCGCTCTTAAGCTCACAATCTGCGAttt > 2:664539/1‑250 (MQ=255) aaaCAT‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATATGTTGCTTCAGTAAGTTGCGCTCTTAAGCTCACAATCTGCGATTGCt < 1:543040/251‑1 (MQ=255) | CCGCATCACCGAAACATGGCTGAAATGGTCGGAGTAAACCGCCACCTGGGCGTAGATGCCGTCGGGTAAGGCATCGATATCATCGTTAGGGTCCAGTTCAATGGTTCCCAGCACA‑CCGTCCGTGCCGGGCACGACCGTTAATGATTGCAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATACTAGTCAGTTTGCCGTGAAACACCTGCCCAGGTAGCGCGTTAAACAC‑CACTTCCGCATCATCGCCAGGTTTCAGACGTAACAGCGAGTTTTGCCGAAATTGGGCGACAATTTGCCGTTTTTGCTCGGGGATGAAGACCATCACCGGACGCAGCGGCAAGGCAGCTGCGTATGTACCTGGGCGGATCAGTACCTGAGTAACGTAGCCATTGCTCGGCGCGCGAATGACA‑GTCTGCTCAAGGTTATATTTTGCTTCAGTAAGTTGCGCTCTTAAGCTCACAATCTGCGATTGCT > NC_000913/3770297‑3770784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |