| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,364,664 | G→A | G620R (GGA→AGA) | yhcD → | putative fimbrial usher protein YhcD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,364,664 | 0 | G | A | 98.7% | 233.1 / ‑4.6 | 78 | G620R (GGA→AGA) | yhcD | putative fimbrial usher protein YhcD |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (40/37); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.94e-01 | |||||||||||
ACACTGTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGCCGTGGT > NC_000913/3364418‑3364903 | ccacggTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCGCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGt < 1:470329/246‑1 (MQ=255) acTGTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCagagagagc > 2:492072/1‑248 (MQ=255) cGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGACTGCTGAACGAGATCACGACGACCGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCTTACATGATCAGAGAGTGACCTTTTCAcc > 1:242449/1‑251 (MQ=255) cGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTa < 2:659027/251‑1 (MQ=255) aTAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAAt > 1:363081/1‑251 (MQ=255) aTAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAAt < 1:635179/251‑1 (MQ=255) aTAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAAt < 1:650212/251‑1 (MQ=255) aaaCCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGACGTCCTACTATGTGAATGCTGAAAGAGATCACGACGAACGTGAAACGAGCTTGAACGGCGGTATAAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGAACTTCCAACGGTCCGATGTCAGGTGGTATTGCAGTACATGATCGGAGAGTGACCTGTTCACCGTGGACTATCAATgcc > 2:390613/1‑249 (MQ=255) tATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTACTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAACCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGc > 1:399846/1‑251 (MQ=255) agggTACTGGTGTCATGGGAGTCGTCTCAGATGAGAAGTCCTACTATGTGAATGCTGAACGAGATCGCGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGGTCCAATCTCCATTACAACCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGcc < 2:204364/249‑1 (MQ=255) aTGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGcc < 1:524573/251‑1 (MQ=255) ggaactggcggcaggggAGACGTCTCAGATGAGATGTCCTTCTAGGTGAATGCTGAACTAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGGTTCAGGTCCAATCTCCATTACACCCAATTCAGCCTTGCCTAAGGAGCAAGAGGCAGTGATGGCCGTACTTGCATAGTTACGATGTCAGGTGGTATTGTAGTACATGATCAGAGAGTTACCTTGTCACCGTGGACTATCTATGACACTTTCGCCa < 2:92752/236‑1 (MQ=255) ggTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCa < 1:21035/250‑1 (MQ=255) ggTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGGGGACTATCAATGACACTTTCGCCa > 2:21035/1‑250 (MQ=255) gTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATc < 1:145255/251‑1 (MQ=255) tgtCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGCACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCTGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCaaaa > 1:214333/1‑250 (MQ=255) tCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGATGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTCCGATGTCAGGTGGAATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCCATGACACTTACGCAATCGCAAAAATg > 2:580876/1‑251 (MQ=255) cAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGCTAACAATATTGc > 1:134754/1‑250 (MQ=255) atgagatgTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGgt < 1:240547/251‑1 (MQ=255) gtcttactaTGTGAATGCTGAACGAGATAACGACGAACGCTAAAAGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCTGGAGCAAGCGGCAGTGATAGCCGTACTTATAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCTCCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATACCAATAGTGCAGGTGTCAGa < 1:521501/246‑1 (MQ=255) ccTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAAt < 1:512291/250‑1 (MQ=255) actaTGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACa < 1:492072/251‑1 (MQ=255) ctaTGTGAATGCTGAACGAGATCACGACGAACGTGAAAAGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGCGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGAGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTAcct > 2:539149/1‑249 (MQ=255) aTGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACAtc < 1:465581/250‑1 (MQ=255) gCTGACCGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTcaggca > 2:109712/1‑249 (MQ=255) cTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGGATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCcggcaggc > 2:537790/1‑251 (MQ=255) gAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGccc > 1:560521/1‑251 (MQ=255) gAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGcc < 1:544506/250‑1 (MQ=255) agaTCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTAt > 1:394052/1‑251 (MQ=255) agaTCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGGTCCAAGCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTAt < 2:134754/251‑1 (MQ=255) cgacgaACGTGAAACGAGCTTGAACGGCAGTATCAGTTACAATCTCCATTACACCAAAATCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGTTGTCAGGTGGGATTGCCGTACATGATCCGAGAGTGACCTTTTCACCGTGGACTATAAATGACACTTTCGCCATCGCAAAAATGGATAACAATCTTGCAGGTGTCAGAATTACATCTCAGGCAGGccacgaatggaca > 2:420368/1‑239 (MQ=255) cgaACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCCGGTGGTATTGCCGTACATGATCAGAGAGAGACCTTTTCACCGTGGACTATCAATGACCCTTTCGCCATc > 2:260798/1‑184 (MQ=255) cgaACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATc < 1:260798/184‑1 (MQ=255) aaCGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGAtttt > 1:243548/1‑251 (MQ=255) aCGAGCTTGAACGGCAGTATCCGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCCGTGATAGCCGTACTTACAACGGTACGCTGTCAGGTGGTATTGCCGTACATGATCCGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCCAAAATGGAAAACAATATTTAAGGAGTCAGACTTACATCTCCGGCCAGCCCAGTATGGACCGATTTTCGGGGTac > 2:222810/1‑250 (MQ=255) cAGTATCAGTGCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTATCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCAt < 1:669657/251‑1 (MQ=255) gTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCa < 1:539149/251‑1 (MQ=255) gTATCAGTTCCAATCTCCATTACACCCAAGTCAGACTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATc > 1:170365/1‑250 (MQ=255) aTCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGa < 2:453090/133‑1 (MQ=255) aTCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGa > 1:453090/1‑133 (MQ=255) tCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATc > 1:245742/1‑251 (MQ=255) acacCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGGACATc > 2:182519/1‑250 (MQ=255) acacCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCa < 1:209578/251‑1 (MQ=255) ccAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGAACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAgg > 1:340384/1‑249 (MQ=255) gTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCTGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTga < 1:537239/251‑1 (MQ=255) gTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTga < 1:214379/251‑1 (MQ=255) ccTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAACTGGATAACCATATTGCAGGTGTCAGAATTCCATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGCACATCAGGAGTTGAGATcc > 1:584668/1‑250 (MQ=255) gCCGCAGGAGCAAGCGGCAGTGATAGCCGGACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCCTTTCCCCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATAc < 1:373453/251‑1 (MQ=255) ccGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATAcc > 1:457780/1‑251 (MQ=255) gCAGGAGCAAGCGGCAGTGATAGCCGTACTTACCACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACAtc > 1:540088/1‑158 (MQ=255) gCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACAtc > 1:49110/1‑158 (MQ=255) gCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGAGAACAATATTGCAGGTGTCAGAATTACAtc < 2:540088/158‑1 (MQ=255) gCAGGAGCAAGCGGCAGGGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGGCAGAATTACAtc < 2:49110/158‑1 (MQ=255) ggAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGcc > 1:334119/1‑249 (MQ=255) aaGCGGCAGTGATAGCCGTACTTAAAACGAAACGATGTCACGTGGTAATGCCGTACATGATAAGAGAGTGACCTTTTCACCGTGGACTATCAAAGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCACCGTATGGACAGATTTTCGGGGAAATGCCGTCATTCCATCAATCCAGCAGTGGCGAACATCAGGAGTTGAGATCGATACCGACAgatagc > 2:481338/1‑246 (MQ=255) aGCGGCAGTGATAGCCGCAATTACAAAGGTACGATGCCAGGGGGCATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCCAAAATGGATAACAATATTGCAGGTGTCAGTATTACATCTCCGGCAAGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCCGGGGTTGAGGTCGATTCCGCCCGCtatcc > 2:31652/1‑247 (MQ=255) gCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCATAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCa < 2:243548/251‑1 (MQ=255) aGTGTTAGCAGTACTTACAACGGTTCGATGTCAGGTGGTATGGCCGTACATGATCAGAGAGTGGCCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCCGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGATTTGAGATCGATACCGCCAGCTTGCCaaaaaa < 2:373028/251‑1 (MQ=255) gATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATg < 1:187435/250‑1 (MQ=255) gTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATG‑ATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAACTTGCCAAAAAATGTCGATATCg < 1:180308/251‑1 (MQ=255) gTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCACTCCAGCCGTGGCGAACATCAGGAGTTGAGATCGTTACCGCCAGCTTGCCAAAAAATGTCGTTATc > 1:97790/1‑251 (MQ=255) acacaggtaccattttagttggtATTGCCGTTCATGTTCAAAGAGTGCACTTTTCACCGTTGACTATCAATGACACTGTCGCAATCGCAAAAATGGATAACAAGATTGCAGGTGTCAGAATTCCATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCTATACCGCCAGCTTGCTAAAAAATGTCGATATCGGTaaa < 2:368134/232‑2 (MQ=255) ggTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTa > 2:562782/1‑244 (MQ=255) ggTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTa < 1:562782/244‑1 (MQ=255) gTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTTTCAATGACACTGTCGCCATCGCAAAAATGGATAACAATATGGCAGGTGTCAGAATTTCATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGcaca < 2:334119/251‑1 (MQ=255) tACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGcaca > 1:82459/1‑250 (MQ=255) gATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTaa > 2:323961/1‑153 (MQ=255) gATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTaa < 1:323961/153‑1 (MQ=255) gATGTCAGGTGGTATTGACGTACATGATCAGAGAGTGACCTTTTCACCGTGGCCTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCCGGTGTCAGAATTACATCTCAGACAGGCCCAGTATGGACAGCTTTTAGGGGTAATGCCGTCATTCCATCATTCCAGCCGTGGCGAACATCAGGAGTTGAGATAGAGCCCGACCGCTTGCAAAAAAATGTCGATATCGTTAACGGCACaaaa > 2:676166/1‑250 (MQ=255) gTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCACAACTGGATAACAATATTGCAGGTGTCAGAATTACATCTCAAGCAGGCCCAGTATGGACAGATTTTAGGGGAAATGCCGTCATTCCATCAGTCCAGCCGTGGCGTACATCAGGAGATGAGATCGATACCGCCAACTTGCCCACAATTGACGATGTCGGTAAAGGCACAAAAATg > 2:510823/1‑250 (MQ=255) gTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATg > 2:62766/1‑250 (MQ=255) gTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGa < 1:109811/251‑1 (MQ=255) aggaggtACTGCCGTACATGATCAGAGCGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGCACAGATTTTCGGGGCAATGCCGTCATTCCATCAATCCTGCCGTGGCGAACATCAGGCGTTGAGATCGATACCGCAAGCTTGCCCAAAAGTGACGTTATCGGTAACGGCAAAAAAATGATc > 2:143298/5‑250 (MQ=255) ggtggtATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCa > 1:162174/1‑250 (MQ=255) ggtATGGCCGTACATGATCAGAGAGTGACCTTTTCACCGGGGACTATTAATGACCCTTTAGCAAGCGCAAAAATGGATACCAATATTGCAGGTGTTAGAATTACATCTCAGGCAGGCCAAGTATGGACAGATTTTCGGGGTAATGCGGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAAGGTCGATATCGGTAACGGCACAAAAATGATCAAACa < 2:560521/251‑1 (MQ=255) aTTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAgg < 1:345768/251‑1 (MQ=255) tACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGAt > 1:499378/1‑185 (MQ=255) tACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGCCgtggg > 2:218153/1‑250 (MQ=255) tACATGATCAGAGAGTGACCTTTGCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGAt < 2:499378/185‑1 (MQ=255) | ACACTGTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGCCGTGGT > NC_000913/3364418‑3364903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |