| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,916,216 | G→A | G387E (GGG→GAG) | barA → | sensor histidine kinase BarA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,916,216 | 0 | G | A | 97.1% | 196.9 / ‑2.2 | 70 | G387E (GGG→GAG) | barA | sensor histidine kinase BarA |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (33/34); total (35/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01 | |||||||||||
TATTGGCTTTACCCGCCTGACGCTGAAAACAGAATTAACACCAACGCAGCGCGATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGGGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAG > NC_000913/2915989‑2916454 | tATTGGCTTTACCCGCCTGACGCTGAAAACAGAATTAACACCAACGCAGCGCGATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATAtt < 1:18987/250‑1 (MQ=255) ggCTTTACCCGCCTGACGCTGAAAACAGAATTAACACCAACGCAGCGCGATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAg < 1:337817/251‑1 (MQ=255) aCCCGCCTGACGCTGAAAACAGAATTAACACCAACGCAGCGCGATCACCTGCATACGATTGACCGTACGGCAAATAATTCGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGTTTCTGGAAAGTATGCCCTTCCCAATACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATACTTCTCCCGATAAAGAGTTAAGACTGAAGCTCACTATTAAAAACGACGt > 2:93540/1‑251 (MQ=255) ccgccagaagcagAAAACAGAATTAACACCAACTCAGAGCGATCACCTGAATACGATTGAACGTGCGGCAAATAATTTGCTGGCAATTAGTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGGTAGAACTGACGCTCAATATTAAAAGCGACGTGc < 2:186252/239‑1 (MQ=255) ccGCCTGACGCTGAAAACAGAATTAACACCAACGCAGCGCGATCACCTAAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGCAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGGGtt > 2:290678/1‑219 (MQ=255) ccGCCTGACGCTGAAAACAGAATTAACACCAACGCAGCGCGATCACCTAAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGGGtt < 1:290678/219‑1 (MQ=255) gactgtGAAAACAGAATTTACTCCAACGCAGCGCGATCACCGGAATACGATTGAACGTTCGGCAAATAAGTTGCTGGCAATTATTAATGATGTTCTCGTCTTCTCGAAACTGGAAGCATGTAAGCTGATTCTTGAAAGTATTCCATTCCCACTACGCAGCACGCTGTATGAAGTCGTTTCTCTGCTGGTACAGTCTTCTCACGATTAAGAGTTAGAACTGACGCTCAATATTTAAAGCGACGTgtatgata < 2:656454/246‑8 (MQ=255) aaaCAGAATTAACACAAACGCAGCGCGATCACCTGAATACGATTGAACGTTCGGCACATAATTGGCTGGCAAGTATTAATGATGGTCGCGACTTCTCTAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACTCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATc < 2:620481/251‑1 (MQ=255) cAGAATTAACACCATCGCAGCGCGATCAACTGAATACGATTGAACGTCCGGCAAAGAATTTGCTGGTAATTATTAATGATGTTCTCGACTTCTCGAAACTTGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGGCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTATAACTGACGCTCAATATTAAAAGCGACGTGCCTGATACCGTGATCGGc < 2:42901/251‑1 (MQ=255) tAACACCAACGCAGCGCGATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTGCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGAccc < 1:636535/250‑1 (MQ=255) agcGCAGCGCGATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGTCTTCTCGAAACTGGAAGCAGGTAAGCTTATGCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGTAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGAt < 2:489455/249‑1 (MQ=255) cAGCGCGATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCGGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGTTTCTGGAAAGTATTCCATTCCCACTCCGCAGCACGCTGCATGCAGTCGTTACTCTGCTGGCACATTCTTCTCACGCTAAAGTGTTATAACTGACGCTCAATATTACATGCGACGTGCCTGATACCGTGATCGGCGACCCGCTGCGATTAc > 2:171126/1‑250 (MQ=255) agctagATCACCTGAATACGATTGAAAGTTCGGCAAATAATTTGATGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGATGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACTCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACTATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAg < 2:490348/246‑1 (MQ=255) cgcgACCACCTGAATACGATTGAACAGTCGGCATATAATATGCTGTCACTTATTAATGATGTTCTCGACTTCTCGAAACTAGAAGCAGGTACGCTGATTCTGGAAAGAATTCCATTCCCACTACGCAGCACGCTGGATGAGGTCGTTACTCTGCTGGCACATACTTCTCACGATAAAAAGTTAGGACTGACGCTCAAAATTAAAAGCGACGTGCCTGATAACGTGaacagagaccagccccgcttacagc > 2:565324/1‑226 (MQ=255) cgATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGAGGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGGATTCCATTCCCACTACGCAGCACGCGGGATGAAGTCGTTACTCTGCTGGCGCATTCTTCTCACGATAAAGAGTTAGAACTGACTCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCaaa < 1:442816/251‑1 (MQ=255) aCCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAatcatc > 1:76984/1‑251 (MQ=255) aaTACGATTGAACCTTAGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGATAGTATTCCATTCCCACTACGAAGAACGCTGGATGAAGTCGTTACTCAGCTGGCACATTCTTCTCACGCTAAAGAGTTAGAACTGCCGCTCAATATTAATCGCGAAGGGCCTGCTACAGTACTCGGCGCCCCGCTGCGATTACAGCAAGTCCTCACTa > 2:392309/1‑250 (MQ=255) aTACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAAc > 1:121622/1‑251 (MQ=255) cGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCtg > 1:324702/1‑251 (MQ=255) gATTGAACGGTCGGCAAATAATTTGCTGGCAAGTATTAATGATGTTCGCTACTTCTCGAAACTTGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACTCGCTGCTATTACAGCAAATCATCACTAACCtgg < 2:93092/251‑1 (MQ=255) aTTGAACGTTCGGCAAATAATTTGCTGGAAATTATTCATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCtggg > 2:229616/1‑250 (MQ=255) aCGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTgggg > 1:173973/1‑250 (MQ=255) tCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATg < 1:386274/250‑1 (MQ=255) tCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATg < 1:481371/250‑1 (MQ=255) cGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGc > 1:258473/1‑250 (MQ=255) cGGCAAATAAGTTGCTGGCAATTTGTAATGATGGTCTCTACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTACCCTGGTGGGGAATGCa < 2:274869/251‑1 (MQ=255) atTTGCTGGCAATTATTCATAATGTTCTCGACTTATCGAAACTGGAAGCAGGTAAGCTGATTCTGGAACGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAACGAGTTAGAACTGACGCTCAATAGTAAAAGCGACGTGCCTGATAACGTGATCGGCGCCCCGCTGCGCTTACAACCAATCATCACTAACCTGGTGGGGCATGCAATTAAATTc > 2:591847/1‑251 (MQ=255) atTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTc > 1:119723/1‑251 (MQ=255) ttGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCa < 1:275962/250‑1 (MQ=255) gCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCg < 2:154816/251‑1 (MQ=255) gCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGGCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCg < 2:274824/251‑1 (MQ=255) tGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAata < 2:509328/156‑1 (MQ=255) tGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAata > 1:509328/1‑156 (MQ=255) attattAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATgg < 1:101002/251‑1 (MQ=255) tattaATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGc > 1:136425/1‑250 (MQ=255) tattaATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTAGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGATGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGc > 1:336817/1‑250 (MQ=255) ctcGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGACCTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGAC‑AACATTTATATTCt > 2:358759/1‑251 (MQ=255) cGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTgg > 1:165744/1‑251 (MQ=255) cGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTgg < 1:7165/251‑1 (MQ=255) aCTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAATGATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTa < 2:119723/251‑1 (MQ=255) tctcGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGa > 1:370513/1‑250 (MQ=255) aaactgtcaacaagTAAGCTGATTCTGGAAAGTATTACATTCCCACTACGCAGCAAGCTGGAGGAAGTCGTTACTCGGATGGCACATTCTTCTCCCGATAAAGAGTTAGAACTGACAGTCAATATTAAAAGCGACGTGCCTGATAACGCGATCGGCGCCCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGCATGCAATTAAATTCACCGTGGATGGCCAAC‑TTGATATTTTGGTAGaaatatg > 2:361152/14‑247 (MQ=255) aaaCTGGAAGCAGGTAAGCTGATTCTGGTAAGTATTCCTTTCCCACTACGCAGCTCGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACg < 2:538670/251‑1 (MQ=255) aCTGGAAGCAGGTAAGCTGAGTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTg < 2:136425/251‑1 (MQ=255) cTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTAACACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGTATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAAAGTgc > 1:604974/1‑251 (MQ=255) ggAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTgc < 1:444116/249‑1 (MQ=255) gAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGA‑CACATTGGTATTCTGGTAGaaaaccgatcgat > 2:322517/1‑242 (MQ=255) aGCTGAATATGGAAAGTATTCCATTCCCACTACGCAGCACGCTAGATGAAGTCGTTACTATGCTGGCACATACTTCTCACGATACAGAGTTAGAACTGACGCTCAATATTAAAAGCGCCGAGCCTGATAACGTGATCGGCGACCCGATACGATTATAGCAAATCATACCTAACCTGGTGGGGAATGCGTTTACATTAACCGAGACGGGC‑AACATTAATATTCTGAGAGAAAAACGTGCGCTCGGTAATAcc > 2:417404/1‑251 (MQ=255) tCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGc > 1:27398/1‑251 (MQ=255) aaGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTg > 1:504820/1‑251 (MQ=255) tacgccattccCACTACGCAGCACGCTGGATGAAGTCGTTACTATGCAGTCACATTCTTCTCACGCTAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGCCGTGCCTGATAACGTGATCGGCGACCCGCTTAGATTACAGCAAATCATCACTAACCTGGTGGGGCATGCAATTCAATTCACCGAGAAAGGC‑AACATTCCTCTTCTGTGAGACAAAAGTTCGCTGAGTACTAGCAAAATGCGGATTGatg > 2:372013/5‑249 (MQ=255) tATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGa > 1:485192/1‑249 (MQ=255) ccgttccCACTACGCAGCACGCTGGATGAAGTTGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCa < 2:216419/248‑1 (MQ=255) attccCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGc > 1:615519/1‑248 (MQ=255) ttccCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATAcccaa > 2:668584/1‑228 (MQ=255) ttccCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCaaa < 1:668584/231‑1 (MQ=255) cACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACCTTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGCCCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGGTATTCTGTTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCgg > 2:285508/1‑251 (MQ=255) aCTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTc > 2:513970/1‑194 (MQ=255) aCTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAAGGGC‑AACATTGATATTc < 1:513970/194‑1 (MQ=255) aCGCAGCACGCTGGATGAAGTCGGTACGCTGCTGGCACATTCTTCTCACGATAAAGAGTGAGAACTGACGCTCAAGATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATa < 1:392309/251‑1 (MQ=255) cagcaCGCTGGTTGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCg > 1:282436/1‑251 (MQ=255) ttacccttcaggtacaTTATTCTCACGATAAAGAGTTAGAACGTACGCTCAATATTAAAAGCGACGTGCCGGATAACGTGATCGTCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAAGTCACCGAGAATGGC‑AACATGGATATTCTGGTAGAAAAACGTGCGCCGAGTAATACCAAAGTGCAGATTGAAGTTCAGATTCTGGATTCCGGCATTGGTATTCTTGAAc < 2:452649/236‑1 (MQ=255) tgctgGCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCAGGATACCGGCATTGGTATTCCTGAACGCGAtaa > 2:229774/1‑248 (MQ=255) ggCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATcg < 1:136080/250‑1 (MQ=255) gCACATTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATcgcg < 2:258473/251‑1 (MQ=255) aTTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCATAGTGCAGATTTAAGTGCAGATTCGGGATACCGGCATTGGTCTTCCTGAACGCGATCAATCGCGCtt > 2:585922/1‑250 (MQ=255) aTTCTTCTCACGATAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTa < 1:3086/251‑1 (MQ=255) cACGATAAAGAGTGAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAAGCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGAGTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAg < 1:229616/249‑1 (MQ=255) tAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGatat < 2:629702/138‑1 (MQ=255) tAAAGAGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGatat > 1:629702/1‑138 (MQ=255) | TATTGGCTTTACCCGCCTGACGCTGAAAACAGAATTAACACCAACGCAGCGCGATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGGGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGC‑AACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAG > NC_000913/2915989‑2916454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |