| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,894,839 | C→T | intergenic (+68/+80) | ygcP → / ← ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,894,839 | 0 | C | T | 98.4% | 192.6 / ‑4.5 | 64 | intergenic (+68/+80) | ygcP/ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (36/25); total (38/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.81e-01 | |||||||||||
CTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTA > NC_000913/2894595‑2895070 | cTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGGAAATCCGCCAACGGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGCAATTCAGCGACTGa > 2:176367/1‑249 (MQ=255) gCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCACCCGCTGATTTCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGCCGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGc < 1:555256/250‑1 (MQ=255) aGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACg > 1:273931/1‑251 (MQ=255) gtaggCCCAAAGTGCTGGGCTGGGGGACAGAGAAAAGCCGCCAACCGTTGATGGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCTTGGCGCTTTCCACCACGAATACCGGGGTCGGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑TTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTg < 1:330831/246‑1 (MQ=255) gTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCtt < 1:53912/249‑1 (MQ=255) ccAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAAACAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCAACGCTTGACGCGTc > 2:677557/1‑251 (MQ=255) cAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGCCGCGTCt > 1:441604/1‑251 (MQ=255) gTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCACGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGAGTCTGGACATTAGCGAAAAAATTACTTTGACTGGATAATC‑GTAACCAATTGCATTTGGATTGATTTGTAGGCCGCACGCCACATCCGACATTCAGATTCTGATACGACGCTTGCAGCGTCTAATc > 2:174211/1‑251 (MQ=255) tgggctgggTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCt > 1:323845/1‑233 (MQ=255) tgggcggggTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGTCGCTTCCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCt < 2:323845/233‑1 (MQ=255) gggctgggTTACGGAGAAAACCCGCCATCCGCTGATTGCCGGTGGGCTGGGTTGCGATGAAGAATAGGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATTCCGGGGTCTGGACGTTAGCGAAAAAATTACTTGGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGc < 2:642807/250‑1 (MQ=255) tgggGGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTAc > 2:239807/1‑250 (MQ=255) tGACAGAGAAAATCCGCAACCCGCTGATTGCCGATGGGCTGGTGTGCGATGAAGCAGATGCGCGTAATACGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGACACAGCCGACATTCAGCGTCTGATGCGCCTCTTGCCGCGTCTTATCAGGCCTACAAGTc > 2:434666/1‑251 (MQ=255) aaccGCCAACCGGGGAGTGCTGGTGGGCTGGTGTGCGATGAAGAAGATGCGTGTAAGGGGATTAACGCGGGTGTAGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATGGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGa < 2:273931/249‑1 (MQ=255) ccAACCTCGGATTGCCGGTGGGTTGGGGGGCGTTGAAGAATATGCGTGTAAGGCGATTACCGCGGGTGTCGTGGCGCTTTCCACCACGAATTCCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTGGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTGTCAGGCCTACAAGTCCCCTGGCCAGAACCGt < 2:641133/251‑1 (MQ=255) gatggCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGTACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGat < 1:676790/247‑1 (MQ=255) ggggggCTGGTGTGCGATTAAGAAAATGCGTGTAAGTCTATTAACGCGGGTTTCGTGTCTCTGTCCACCACTAAGACCGGGGTCTGGACTTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTGGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTAGCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCgg < 2:413308/248‑1 (MQ=255) tGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGCCCCCAGGCCAGAACCGTCGGCCGGATCATCCGGc > 2:332837/1‑250 (MQ=255) ggCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTCCTTTGACGGGATAATC‑TTAACCAATTGAATTTGGTTTGATGTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGAGGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTAtt < 1:354517/250‑1 (MQ=255) agaTGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCg < 1:174211/251‑1 (MQ=255) aTGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTg > 1:173976/1‑251 (MQ=255) aTGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATACTC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCCGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGCTCATCCGCCAACACGTTATTGGCAATCTGCTTGAATGTTTGt > 2:74235/1‑251 (MQ=255) gATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCAcc > 1:573931/1‑251 (MQ=255) aTTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCAcc > 1:167409/1‑250 (MQ=255) ttAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGACAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCAcc > 1:96527/1‑249 (MQ=255) aaggcgGGTGTCGTGGCGCTTCCCTCCACGAATACCGGGGTCGGGACGTGAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTGGGTTTGATTTGTAGGCCGTACGCCAAATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTg < 1:190/248‑1 (MQ=255) cGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGcac < 1:332837/250‑1 (MQ=255) ccgcgaatctcGGGGTTTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATGTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGtcatc < 1:49968/241‑1 (MQ=255) cacGAATACCGGGGTCTGGACGTTAGAGTAAAAATTACTTTGCCGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGCCGCGTCTTATCAAGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTCCGTGAATGTTTGTCACCAGCTCCTCCCGCACCACTTTCCAGtcctc > 2:108194/1‑247 (MQ=255) gcaTACCGGAGTCTGGACGATAGCGAAAAAATGACTTTGACGGGATAATC‑GAAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGCCATTCAGAGTCTGATGCAACGCATGACGCCTCTTATCAGGCCTACACATCCCCAGGCCAGAACCGTAGGCATGATCATCCGGAAACACGTTATGGGCAATCTGCGTGAAAGTTTGTCACAAGTGCATCCCGCACCACTTTCAAGTCATCAAcc > 2:497583/3‑251 (MQ=255) gAATACGGGGGTTTGGACGTTAGCGAAAAAATTACTTGGACGGGATAATC‑GTAACCAATTGAATTGGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAAGCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTGCCAGTCATCAAcc < 1:426587/251‑1 (MQ=255) ggggttttgacgttatttaaaaaaTTATTTTGACGG‑ATAACCTGAATCCAGTTGGATTTGGTTTGTTTTTTAGGTCCCACGCCACATCCGACATTCAGCGTCTTATGCGACGCTTGACGCGTCTTATCAGGCCTATAAGTCCCCAGTCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCTTGAATGTTTGTCACCAGTGCCTCCTGCACCCCTTTCCAGTCATCAACCACGctaa < 2:411153/233‑4 (MQ=255) gggTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAAc > 1:346152/1‑251 (MQ=255) gggTATGGATGTGAGCGAAAAAATTACTTAGACGGGATAAAT‑GTAACCAATAGAATTTGGTTTGATTTGTAGGCCGCACGCCACATACGACATTCAGCGGCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCAAGAACCGTAGGCAGGAGCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTGGTCAACAGTGGCGCTAGCACAACTTTCCAGTCATCAACCACGCCAAc < 2:71490/251‑1 (MQ=255) gTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCAAGCACCACTTTCCAGTCATAAACCACGCCAACAt > 2:29273/1‑251 (MQ=255) tCTGGACGTTAGCGCAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCACCAGCCCCACTTTCCATCCATCAACCACGCCACCATc > 2:316792/1‑251 (MQ=255) tGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTg > 1:568706/1‑251 (MQ=255) tAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCtgtg > 1:364969/1‑250 (MQ=255) aGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATGTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGaa < 1:380660/251‑1 (MQ=255) ttttgaaggggATAA‑C‑GTAACCAATTGAATTTGGTTTGATTTGTAGCCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAgcg < 2:111883/242‑1 (MQ=255) gACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGACCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTgg < 1:176367/250‑1 (MQ=255) gggATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCCGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCACCGCTGGCGTc > 2:417542/1‑251 (MQ=255) tAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATg > 1:494204/1‑250 (MQ=255) aTC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGAtt < 1:453048/251‑1 (MQ=255) aaCCAATTGATTTGGGTTTGATCTGTAGGCAGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATc < 2:285984/250‑1 (MQ=255) aaCCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCCACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATcc > 2:156503/1‑250 (MQ=255) aaCCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACAACGCCAAAATCTGCCTGTGAAAATCCCGCAGCGCTGGCGTCAAGATTAATCg > 2:470017/1‑251 (MQ=255) aaTTGAATTTGGTTTGATTTGTAGAACGAACGCAAACTCCCAAATTCAGCGTATGATGCGACGCATGTCTCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTGGGCAGGATCATCCCGCAACACGTTATTGGCAATCTGCGCGAATGTTTAACCCCAATGCATCCAGCAACCCTTTCCAGCCCTCAACCACGCCACCACCTGCCTGTGAACATACCGCACCCATGTCGTCATGCTTCATCGccac > 2:339041/1‑251 (MQ=255) aTTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGccacc > 1:233263/1‑251 (MQ=255) ttGAATTTGGTTTGATATGAAGGCCGCAAGCCACATCCGACATTAAGCGTCGGATGCCAAGCTTGACGCCGCTTATCAGGCCTACCAGTCCCCAGGCCAGACCCGTAGGCAGGATCATCCGGCAACACGTTATTGGAAATATGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAACACCGCAGCTATGGCGTCATGATTCATCGccacc > 2:237807/1‑250 (MQ=255) tGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACAGCAGCGCTGGCGTCATGATTAATCGCcaccac > 1:560133/1‑251 (MQ=255) cccgccgctcctccgatctaCGCCACATCCGACATTCAGCGTCGGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTg < 2:356847/232‑1 (MQ=255) ttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATc > 2:108641/1‑130 (MQ=255) ttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATc < 1:108641/130‑1 (MQ=255) ttGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGc < 1:434666/250‑1 (MQ=255) tGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGt > 1:164067/1‑251 (MQ=255) tGTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCAACCACAAACTTGCTATTGCGt > 1:469352/1‑251 (MQ=255) gTAGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTa < 1:239807/251‑1 (MQ=255) aGGCCGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTACAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTAcg > 2:413147/1‑251 (MQ=255) cGCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTAcgcccg > 1:603504/1‑251 (MQ=255) gCACGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTAcgcccgc > 2:336656/1‑251 (MQ=255) aCGCCACATCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTg > 1:356847/1‑232 (MQ=255) gCCACATCCGACATTCAGCGTCTGATGCGAAGCTTGACGCGTCTTATCAGGCCTACAAGTCCCAAGGCAAGAACAGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGAGCCTCCAGCACCACTTTCCAGTAATCAACCACGCCAACATCTGCCTGTGAAAATACCGAAGCGATGGCGTCATGGTTAATCGCCACCACATACTTGCTATTGCGTACGCCCGCCAtt > 1:458702/1‑251 (MQ=255) cacaTCCGACATTCAGCGTCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTa > 1:209536/1‑250 (MQ=255) | CTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATC‑GTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTA > NC_000913/2894595‑2895070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |