| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,883,115 | G→A | P342S (CCT→TCT) | casA ← | type I‑E CRISPR system Cascade subunit CasA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,883,115 | 0 | G | A | 95.2% | 123.2 / ‑3.7 | 43 | P342S (CCT→TCT) | casA | type I‑E CRISPR system Cascade subunit CasA |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (21/19); total (22/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
CCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAGTCTTTATTTTTAAACCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGG‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGAATGCGGATGGGGCCATAGCCCATTAACTGTAAAGGTAAATTTTTCCTTAAGAAAACCGGTATA > NC_000913/2882876‑2883358 | ccTTTCTGCAGTCTCATGACCAGAGACTCCGGCCCCTTTGAAGTCTTTATTTTTAAACCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTgcggcg < 2:36937/251‑1 (MQ=255) cTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAGTCTTTATTTTTAAACCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGCCGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGgcgc > 1:346036/1‑251 (MQ=255) aaCAGAGACTACGGCCCCTTTGAAGTTTTTATTTTTAAACCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCTTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGAt < 2:13545/251‑1 (MQ=255) ccGGCCCCTTTGAAGTCTTTATTTTTAAACCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGAGCAATAT‑TTCTGAATTGATTCACAA‑ccgc > 1:450781/1‑251 (MQ=255) ccGGCCCCTTTGAAGTCTTTATTGTTAAACCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑cc < 1:294451/249‑1 (MQ=255) gAAGTCTTTATTTTTAAACCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGAt > 1:455561/1‑251 (MQ=255) aGTCTTTATTTTTAAACCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGAttt > 1:596319/1‑251 (MQ=255) aCCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTg > 1:416562/1‑250 (MQ=255) gTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGCTTTCCATTTTCATTTTGATTAATCTTATCTAc > 2:202954/1‑251 (MQ=255) cTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGC‑ACTTTGCGGCGCATTAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGc > 2:113250/1‑251 (MQ=255) gTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAtt > 1:399045/1‑251 (MQ=255) aaGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTtg > 1:633387/1‑251 (MQ=255) aGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGG‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTtgt < 1:253516/251‑1 (MQ=255) gTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTc < 1:134750/249‑1 (MQ=255) atatCCCAAACCAAAAGGCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATTACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCatgat < 2:544189/250‑1 (MQ=255) ccAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCg > 1:304228/1‑251 (MQ=255) aGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGCTTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCTTGATGGt > 2:211866/1‑238 (MQ=255) aGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGt < 1:211866/238‑1 (MQ=255) tCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATCATCAATTCAAGAGA‑ACTTTGCGGCGCAATCT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTa > 2:309566/1‑204 (MQ=255) tCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGTCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTa < 1:309566/204‑1 (MQ=255) cACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACTCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTTAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGt < 1:636161/235‑1 (MQ=255) cACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGCTGGt > 2:636161/1‑235 (MQ=255) tttATCACATTGCCATATTGTTGCCACCCCTGATTAAACCTCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGCAAttt > 1:185302/1‑251 (MQ=255) gacacttttccaatctgatgttgCCACCCCTGATTAAAAATCAACACACCATGACGCCTTTCAAGAATAGATGCTTGATTATTACGATACCCCCCCAAAACCAATGCAAGAGA‑ACGTTGCGTCGCAAAAT‑TTGTGAATTGATTCACAT‑CCGCCGCCACGCGATTGCCATTTTCATTTTGAATAATCGTAGCTACCACAACTCGGCTGTTTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGaaagtt < 2:608503/233‑4 (MQ=255) gTATTGTTGCCGCCCTTGATTAAACATCAACACATCATTACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCAGAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCGGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTGCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTc < 1:386035/249‑1 (MQ=255) atttttgccctcccgtaTTAAACATCAACCCACCATGTCGCCGTTAAAGAATAGATGCTTTATTATTACGATATCCCCCAATAACCAATTCAAGAGA‑ATTTTGCGTGTCAAAAT‑TTCTTAATGTATTCACAC‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCGTCCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCATCCTCCCCt < 2:538580/235‑1 (MQ=255) aTTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGCGGTGGTGAAAGCAAGAAAttt > 1:608503/1‑235 (MQ=255) atgtttcacacccTGATAAAACAACAACCCCTCATGCCGCCGTTCAAGAATAGATGCTTGATTAGTTCGATCCCCCCCCATAAGCAATTCAATAAA‑ACTGTGCGGCGCAATAT‑TTTGGAATTGATTCAGAA‑CCGCCGCCACGTGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATTGTGCGGAGGGGGTCACAGCAAGAAATTTTTCCTCAACCTccccct < 2:223634/241‑3 (MQ=255) tgttgCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCtt < 1:129966/250‑1 (MQ=255) tgttgCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTAAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCttt > 2:603222/1‑251 (MQ=255) ccccTGATTAAACATCAACACATCATGCCGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAAttt < 2:167763/225‑1 (MQ=255) ccccTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAAttt > 1:167763/1‑225 (MQ=255) cccTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGt > 1:9232/1‑251 (MQ=255) acaatactttatgtagctgTTCAAGAATAGAGGTTTGATTATTACGATATCCCTCTATAATTAATTCAA‑AGGTACTTTGCGGTGCAATAT‑TTCTTACTATATACACAC‑CCTCCGCCTCGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCCCAACTCGGCTGATTTGTGTCCATGATGTTGCGGAGGTGGTGAAAGCAAGAAATTGTTCCTCAACCTCCACTTTCTTGACTGTTACCAGTCAAggg < 2:167888/233‑1 (MQ=255) acacATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGa > 1:181989/1‑250 (MQ=255) acaTCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTAATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTAAAAGCAAGAAATTTTTCATCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGAATg > 1:659500/1‑251 (MQ=255) cGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGAATGCGGATgggg < 1:482732/251‑1 (MQ=255) gATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGAATGCGGATGGGGCCATAGCCCATTAAc > 1:39087/1‑251 (MQ=255) gATTATTAAGATACCCCCCTAAAATCACTTAAAGAGA‑ACTTTGTGGCGAAATAT‑ATCTGAAGTGATT‑ACAAACCGCCGCCACGCGATTTCCATTTTCATTTTGAAGAAGCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATGTTTACTCAACCTCCCCTTTCTTGAATGTTACCAGACAAGGGGAATGCGGATGGGGCCATAGCCCATTAACTGTaaa < 2:185302/250‑1 (MQ=255) aCGATATCCCCCCATAATCAAATCAAGAAA‑ACTTTGCGGCGAAAAAT‑TTCTGAATTGATCCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGAATGCGGATGGGGCCATAGCCCATTAACTGTAAAGGTAAAt < 2:39087/250‑1 (MQ=255) cccATAATCAAACCAATAGA‑ACTTTGCTGCCCAA‑ATGTTCTAAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAAGCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCTGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGAATGCGGATGGGGCCATAGCCCATTAACTGTAAAGGTAAATTTTTCCTTAAg < 2:399045/251‑1 (MQ=255) cAATTCAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGAATGCGGATGGGGCCATAGCCCATTAACTGTAAAGGTAAATTTTTCCTTAAGAAAACCgg > 1:323338/1‑251 (MQ=255) cAAGAGA‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGAATGCGGATGGGGCCATAGCCCATTAACTGTAAAGTTAAATGTTTCCTTAAGAAAACCGGtata < 1:597768/250‑1 (MQ=255) | CCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAGTCTTTATTTTTAAACCCTTCTGCAAAGGTATATAACGCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGG‑ACTTTGCGGCGCAATAT‑TTCTGAATTGATTCACAA‑CCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCGGAGGTGGTGAAAGCAAGAAATTTTTCCTCAACCTCCCCTTTCTTGACTGTTACCAGACAAGGGGAATGCGGATGGGGCCATAGCCCATTAACTGTAAAGGTAAATTTTTCCTTAAGAAAACCGGTATA > NC_000913/2882876‑2883358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |