Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,629,247 C→T I11I (ATC→ATT ydfZ → putative selenoprotein YdfZ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,629,2470CT98.0% 147.2 / ‑4.2 49I11I (ATC→ATTydfZputative selenoprotein YdfZ
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (23/25);  total (23/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.12e-01

CCAGGAAAACAGCGACTGGTTTAGCGAAGAGTAATTCATTTCCTCTCATCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATCACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCG  >  NC_000913/1629005‑1629489
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                    
ccAGGAAAACAGCGACTGGATTAGCGAAGAGTAATTCATTTCCTCTCCTCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAACAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGCAAACACATATGACGAACTACGCTCGTAACCGTAACGCAATTACCCCTgg                                                                                                                                                                                                                                              >  2:680640/1‑251 (MQ=255)
             gaatGGTTTAGCGAAGAGTAATTCATTTCCTCTCATCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGCAAACACCTATGACGACCTACGATAGTAACCGTAACGCAATTACCACTGGCAGCCGGGttt                                                                                                                                                                                                                                   >  1:275256/4‑248 (MQ=255)
             gACTGGTTTAGCGAAGAGTAATTCATTTCCTCTCATCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATg                                                                                                                                                                                                                                 <  1:14791/251‑1 (MQ=255)
             gACTGGTTTAGCGAAGAGTAATTCATTTCCTCTCATCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATg                                                                                                                                                                                                                                 >  1:275272/1‑251 (MQ=255)
                  gTTTAGCGAAGAGTAAGTCATTTCCTCTCATCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAACCAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACTCCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAg                                                                                                                                                                                                                            <  2:329325/251‑1 (MQ=255)
                         gAAGAGTAATTCATTTCCTCTCATCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATgg                                                                                                                                                                                                                                >  1:562856/1‑240 (MQ=255)
                         gAAGAGTAATTCATTTCCCCTCATCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTTCCACTGGCAGCCGTGTTATgg                                                                                                                                                                                                                                <  2:562856/240‑1 (MQ=255)
                            gagTTATTCATTTCCTCCCATCCCACCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCTGCACCGGt                                                                                                                                                                                                                  <  2:605189/251‑1 (MQ=255)
                                             tcATCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCt                                                                                                                                                                                                >  1:283630/1‑251 (MQ=255)
                                                       cGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGAt                                                                                                                                                                                     >  1:626785/1‑251 (MQ=255)
                                                         gggggagaGTCTTTTCCCCCGCCTTATGGCTCATGCATTCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGagtg                                                                                                                                                                                        <  2:619594/243‑4 (MQ=255)
                                                         gggTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTg                                                                                                                                                                                        >  1:619594/1‑247 (MQ=255)
                                                         gggTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATAc                                                                                                                                                                                   <  1:171081/251‑1 (MQ=255)
                                                           gTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTg                                                                                                                                                                                 <  1:272829/251‑1 (MQ=255)
                                                                       tCCCCCTCCTGATGGCTAATGCATGCATCAAAAAAGATGTGAGCTTGATCATAATCAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTGAGACTGTAAATCAGAAAGGAGAAAACTCCTATGACGACCTACGTTCTTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGGTAGCGGCACCGGGCATACTGGCAAGATCCTGTCGATTGATACTGAAGGTCGGAcc                                                                                                                                                                      <  2:615208/250‑1 (MQ=255)
                                                                       tCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGTGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGAcc                                                                                                                                                                      <  1:654003/250‑1 (MQ=255)
                                                                                           gcatgcatCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTCATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATCACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCgg                                                                                                                                                  <  1:297264/250‑1 (MQ=255)
                                                                                                    aaaaaaGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTa                                                                                                                                        <  1:158273/251‑1 (MQ=255)
                                                                                                        aaGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAgttg                                                                                                                                    >  1:432119/1‑251 (MQ=255)
                                                                                                            gttaaGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGATGATTTATATTGCGCCCGTTACGTGGGCTTCGACGGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAgttgtgga                                                                                                                                <  2:275272/247‑4 (MQ=255)
                                                                                                             gggAGCTTTAGCAAAAACAAAAAGTATTTCACCCGGCATTGTTATTTTTATTTCGCCCGTTCCGTTGGCGGCTAATGTAAATAAGAAAGGAGAAAACTCATTGGCCGATCTACTATCGGAACCGTAACCCAATTACCACTGGCAGCCGTGTTATGGTTAGCGTCACCGGCCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACTGCTGCGCAAATCCTCCTCGGAAAAGCCGTAGTTGTTGa                                                                                                                                <  2:275256/248‑1 (MQ=255)
                                                                                                                aGCTTGAACAAAAACAAAAACTATTTCACTCGACAGGAGTATTTATATTGCGCCCGTAACGTGGACTTCGACTGTAAATCAGAATGGAGAAACAACCTATGACGACCTACGATCGTAACAGAAACGCAATTACAACTGGCAGCCGGGTTAAGGTTAGCGACACATGTCACAATGGCACAATCCTGTCGATGACTAATGAAGAGCTTACCGCTGCGCAAATCCGCCGCGGACAAACCGAAGTTGTTGaaagt                                                                                                                            >  2:401789/1‑248 (MQ=255)
                                                                                                                 gctataTCAAAAACAAAAAATATTTCACTCGAAAGGAGTATTTATATTGCGCCCGTTACGTGTGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGTCCTACGATCGTAACCGTAACGCAAGTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCATACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGtt                                                                                                                           <  2:105255/246‑1 (MQ=255)
                                                                                                                        caaaaacaaaaaATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGa                                                                                                                       >  2:250246/1‑248 (MQ=255)
                                                                                                                          aaaaaaaaaaATATTGCAATCGACAGGAGTATTTAAATTGCTCCCGATACGTAGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGACCGGAACCGTAACGCAATTACCACTGGCGGCCGTGTTATGGTTAGCGGCACCGGTCCCACTGGCAAGATCCTGTCGATTGATACTGAAGTGCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTCGGTGTTGAAGGTTGTGAAgaga                                                                                                                  <  2:178824/251‑1 (MQ=255)
                                                                                                                                aaaaaTATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTgg                                                                                                            >  1:210832/1‑251 (MQ=255)
                                                                                                                                       tttCACTAGACAGGAGTATTTATAATGAGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAAAAACCCCAAATGACGACCTACGATCACAACCGTAACGAAATTACAACTAGCAGCAGTGTTATGGTTAGCGGCACCGGTCACCACGGCAAGATCCTGTCGTGTGATCCTGAAGGGCTGACCGCTGCGCAACTCCGCCGCGGAACAACCGTAATTGTTGTAGGTTTGGAAGCGAAACTGGCACCACt                                                                                                     >  2:330977/1‑251 (MQ=255)
                                                                                                                                        ttCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTg                                                                                                    >  1:393459/1‑251 (MQ=255)
                                                                                                                                           aCTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCGACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGGTGTGAAGAGAAACTGGCACCACTGGAc                                                                                                 <  1:481013/251‑1 (MQ=255)
                                                                                                                                                  aGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTCCGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCaa                                                                                                                                                             >  2:301727/1‑184 (MQ=255)
                                                                                                                                                  aGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCaa                                                                                                                                                             <  1:301727/184‑1 (MQ=255)
                                                                                                                                                     aGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGATGAGAACCTGGCCCCACTGGACCTGATTCgct                                                                                       >  2:12297/1‑249 (MQ=255)
                                                                                                                                                              atTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTGATGGTTAGCGGCACCGGTCACCCTGGCAAGATCCTGTCGATTGATACTGAAGGACTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGAAGTTGTTGAAGGTTGTGAAGAAAAACTGGAACCACTGGCCCTGCTTCGTCTCGGCATgg                                                                              >  2:269353/1‑250 (MQ=255)
                                                                                                                                                                    cccggtccGTGGTCTTCGATGGTAAATCAGAAAGGATAAACCGCCTAATACGACCTAAGATCGTAACCGAAACGCAGTTACCACGGGCAGCCGTGTTAGGGTTCGCTGCACCGGTCACACTGGCAAGATCCTGTCGATTTATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAg                                                                        <  2:492129/244‑1 (MQ=255)
                                                                                                                                                                            gTGGGATTCGTCTGTAAAACAGAAAGGAGAAAACAACTATGACGACCTACGATAGTAACCGTAAAGCAATTAACACTGGCAGCCGTGTTATGGATAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGGCTGCCCGCTGAGCAAATCCGACGCGGAAAAAACGTGGATGTTGATGGGTGTGAAGCGAACCTTGCACAACTGCACGTGATTCGTCTAGGCATGAACTAGGCGTATGa                                                                 >  2:630991/1‑250 (MQ=255)
                                                                                                                                                                                   gcGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATgccgc                                                          <  2:210832/249‑1 (MQ=255)
                                                                                                                                                                                        tGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGGTTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGCAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAGGCGTGTGAATGCCGCCGGTgg                                                    >  2:268602/1‑251 (MQ=255)
                                                                                                                                                                                         gTAAAGCAGAAAGGAGAAAACACCTATGACGAACTACGATCGTAACCGTAACGCAACTACCACTGGCATCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCGGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTGGTTGAAGGTTGTCAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATggc                                                   <  1:630991/251‑1 (MQ=255)
                                                                                                                                                                                          aaaagcAGAAAGGAGAAAACACCTAGGACGACCTACGACCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTGAGGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATggcg                                                  <  1:260965/246‑1 (MQ=255)
                                                                                                                                                                                             aTCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATggcggc                                                >  1:184434/1‑250 (MQ=255)
                                                                                                                                                                                               cAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATgccg                                                           >  2:216042/1‑237 (MQ=255)
                                                                                                                                                                                               cAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATgccg                                                           <  1:216042/237‑1 (MQ=255)
                                                                                                                                                                                               cAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCAtt                                             <  1:531822/251‑1 (MQ=255)
                                                                                                                                                                                                         aaaaCACCTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTGTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTAc                                   >  1:194320/1‑251 (MQ=255)
                                                                                                                                                                                                                cTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCCTGCACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCttttt                                      >  2:129493/1‑241 (MQ=255)
                                                                                                                                                                                                                cTATGACGACCTACGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCttttt                                      <  1:129493/241‑1 (MQ=255)
                                                                                                                                                                                                                             aCGATCGTAACCGTAACGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTTATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTGGAAGGTTGTGAAGAGAAACTGGCTCCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCa                <  1:84019/251‑1 (MQ=255)
                                                                                                                                                                                                                                     aaccgtaacGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGc         <  1:596120/250‑1 (MQ=255)
                                                                                                                                                                                                                                           aacGCAATTACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTCCTTCACGGAATATTTTGCCACGGTCGCTTTcgcg  >  1:387114/1‑251 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                    
CCAGGAAAACAGCGACTGGTTTAGCGAAGAGTAATTCATTTCCTCTCATCCCATCCGGGGTGAGAGTCTTTTCCCCCGCCTTATGGCTCATGCATGCATCAAAAAAGATGTGAGCTTGATCAAAAACAAAAAATATTTCACTCGACAGGAGTATTTATATTGCGCCCGTTACGTGGGCTTCGACTGTAAATCAGAAAGGAGAAAACACCTATGACGACCTACGATCGTAACCGTAACGCAATCACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAAGCGTGTGAATGCCGCCGATGGCGGCATTGCTTTTTTACTTCACGGAATATTTTGCCACGGTCGCTTTCGCG  >  NC_000913/1629005‑1629489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: