| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,282,857 | C→T | R998R (CGC→CGT) | narG → | nitrate reductase A subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,282,857 | 0 | C | T | 96.2% | 136.1 / ‑2.6 | 53 | R998R (CGC→CGT) | narG | nitrate reductase A subunit alpha |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (25/25); total (27/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01 | |||||||||||
GATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGACACCCGTTCGGTGAAAGAAGTGATAGGCCAGAA > NC_000913/1282611‑1283096 | gATTGCCTGGAACCCCCAGAGCGAGATGGACCGGCGGCGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCCAAAGGCCAGCCGATGCTGAACACCGCAATTGAGGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGata < 2:180764/251‑1 (MQ=255) ccTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACACCACAGCGGAAGGTCCGGCGAAAAGCCAGACGACGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGAACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCTTGGGATGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGACGCTGAATAAAGAAGACGAGAAGATCCGCTTACGTGATATTc > 1:277279/1‑249 (MQ=255) aaCACCCAGGGCGAGATGGATCTGCTGCGTAAGCTCAACGACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACGGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGcaca < 2:421049/251‑1 (MQ=255) gagCGAGATGGATCTGCTGCGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGCCCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCgcgc > 2:230995/1‑250 (MQ=255) gCGAGATGGATCTGCTGCGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCaa > 1:545267/1‑250 (MQ=255) ctgcGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGccc > 1:273048/1‑251 (MQ=255) gcGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCg > 1:376709/1‑250 (MQ=255) ccTCAACTCCACCAAAGCGGAAGGTCCGGTGAAAGGCCAGCCGATGCGTAACCCCGCAATTGATGCGGCAGAGATGATCTTGACACTGTCACCGTAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAATACGAGAAGTTCCGCTTCCGTGATATGCAGGCACAG‑CCGCGCAAAATTATCTCCTGCCCGACctggt < 2:647031/250‑1 (MQ=255) cTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACcgggtc > 2:267827/1‑251 (MQ=255) cAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACctggtctg < 1:340416/251‑1 (MQ=255) cAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCGGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGCTATTCAGGCAAAG‑CCGCGCTAAATTATCTCCAGCCCGACctggtctg > 2:451201/1‑251 (MQ=255) cacCAAGGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAAATGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGtctggtctgg < 2:186714/251‑1 (MQ=255) cAAAGCGGAAGGGCCGTCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGGCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAg < 1:415531/251‑1 (MQ=255) tCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATCCGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGGGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGCTGAACACGttt > 2:333323/1‑251 (MQ=255) ccGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGttt < 1:305431/250‑1 (MQ=255) gAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAG‑ACGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACa < 1:256772/251‑1 (MQ=255) gCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGtt < 1:115935/251‑1 (MQ=255) ccGATTCTGAAAACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCTGTTa < 2:116824/251‑1 (MQ=255) aTGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTacac > 1:678027/1‑251 (MQ=255) gAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACg > 1:99168/1‑251 (MQ=255) ccacCGCAATTGAGTCGGCATGGATGATCCTGACGCTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGtt < 2:270109/250‑1 (MQ=255) cGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGAAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACAAACGTTCACg > 2:475453/1‑251 (MQ=255) gCAATTGATGCGGCAAAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCATGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGGTCACg > 1:298929/1‑250 (MQ=255) cAATTGATGCGGCAGAGCTGATCCTGACACTGGCACCGGAAACCAACGGTCCGGTAGCCGGGAAAGCCTGGACTGCCCTGAGCGAATTTACCGGTCGTGCCCATACGCATCTGGCGCTGAATACAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAG‑CCGCGCAAAATTAGCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTcccg > 2:349070/1‑246 (MQ=255) aTTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCt > 1:358831/1‑251 (MQ=255) tGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGAAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTg < 1:475453/250‑1 (MQ=255) tCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGAGCACAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACATTTCTTACAACGACGGTTACACCACCGTTCCCGAACTGATCCCATAGCGTACGctt > 2:377989/1‑250 (MQ=255) gACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTg > 1:539558/1‑251 (MQ=255) cACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAg < 1:245630/251‑1 (MQ=255) aCCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTAAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACACAGCCGGTTACCCCAACGTTCACGAGCTGATACCATGGCGTACGCTCTCTGGTAGTCAGCAACTGt > 2:501390/1‑250 (MQ=255) cGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAgg > 1:375231/1‑251 (MQ=255) cAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCa < 1:551119/251‑1 (MQ=255) cggTAGCCATGAAAGCCTGGGCTGCCCTGAGCGTATTTCCCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTCCAACGCCGGTTACACCAACGGTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCAc < 2:181263/250‑1 (MQ=255) aGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATGTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGCCGAGAAGATCCGCTTCCGTGATAATCAGGCACAG‑CCGCGCAAAATTATCTCCATCCCGACCTGGTCTGGTCTGGAAGATGAACACTTTTCTTCCAACGCCGGTTTCACCAACGTTCACGAGCGGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAg < 1:27374/250‑1 (MQ=255) tGGGCTGCCATGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGACTAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACCCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGGTCACAAGTGGAtacggggttt > 2:243583/1‑242 (MQ=255) ggCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCg < 1:451201/251‑1 (MQ=255) ccTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGaa > 1:48856/1‑250 (MQ=255) gAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGcc < 1:230995/251‑1 (MQ=255) ttaccagccgttacATACACATCTGACGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGAAATTCAGGCACAA‑ACGCGCAAAATTCTCTCCAGCACGACCAGGTATGGTCTGGAAGATGGACACGTTTCTACCAACGACGGATACACCAACGTTCACGAGCTGCTCCCATGTCGTACCCTCTATGGTAGTCAACAACTGTCACAGGACAACCAATGGATGACTGATTTCGGTGAAAGCgtgctgacat > 2:467538/14‑247 (MQ=255) ccgtgcgggACCATATGCACCTGGCGCGGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATTTTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGGCTGGTCTTGAAGATGAACACGTTTCTTACAACGCCGGTGACACCAACGTTCACGAGCTGATCCCATGGCGTTCGCGCTCTGGGCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTAt < 2:99168/243‑1 (MQ=255) ccGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGTATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTAt < 1:558252/251‑1 (MQ=255) cGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCGCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGGCGTCAGCAACGGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTcc < 1:471581/251‑1 (MQ=255) gACCATACGACTCTGGCGCTGAATAAAGAAGCCGAGAAGTTCCGCTGCCGTTATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGAGCCCATGGCGGACGCTTTCTGGTCGTCAGCAACTGTATCAGGATCTCCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTccgcc < 2:246300/251‑1 (MQ=255) aCGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCg > 1:610746/1‑250 (MQ=255) aCGCATCTGGCGCTGAATAAAGAAGACGAGAAGAGCCGCTCCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCTACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCg < 1:524376/250‑1 (MQ=255) tGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGGTCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGCTCACCAGTGGATGCATGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGACACCCGt > 1:619589/1‑251 (MQ=255) ggCGCTGAATATAGAATACGGGAAGATCCGTTTCCTTGTTATTCAGG‑ACAAACCTTGCAACAGTAGCTCCAGCCCGACCTGGCCTGGTCTGGAATATTAACACGTGTCTCACAACGCCGGTTACACCAACTTTCACGAGCTGATCCCATGGCGTACGTTCTCTGGTCGCCAGCAACTGTATCTGGATCACCAGGGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGACTCCCGtt < 2:367528/251‑1 (MQ=255) gcgcTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGACACCCGTTc > 1:158867/1‑251 (MQ=255) gcTGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCgg > 1:503388/1‑207 (MQ=255) gcTGAATAAAGAAGACGAGAAGATCCGCTGCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCGGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCgg < 2:503388/207‑1 (MQ=255) tGAATAAAGAAGACGAGAAGATCCGCTTCCGTGATATTCAGGCAAAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGCATCAGGATCACAAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGCCACCCGTTCGGTg > 2:673647/1‑251 (MQ=255) aTCCGCTTCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGACACCCGTTCGGTGAAAGAAGTGATAGGCCAGa > 1:639913/1‑250 (MQ=255) aTCCGCTGCCGTGATATTCAGGCACAG‑CCGCGCAAAATTATCGCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGGATCAGGATCGCCAGTGGATGCGTGATTTCGGTGAAAGCCTGGTGGTTTAGCGTCCGCCGATCGACACCCGTTCGGTGAAAGAAGTGATAGGCCAGaa < 2:610746/251‑1 (MQ=255) | GATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAG‑CCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGACACCCGTTCGGTGAAAGAAGTGATAGGCCAGAA > NC_000913/1282611‑1283096 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |