Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,169,836	A→G	L180P (CTG→CCG)	ldtC ←	L,D‑transpeptidase LdtC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,169,836	0	A	G	100.0%	173.5 / NA	55	L180P (CTG→CCG)	ldtC	L,D‑transpeptidase LdtC
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (31/24);  total (31/24)

GGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACTTTTATCGGAGTGTTGATGATATTCACTTTGGTGCC‑TGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCAGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTACCCGGCGGGTAGTAATAGAGACGCAGCTCCGCAATGTTGATCACAATGCCTTCGCGC  >  NC_000913/1169590‑1170075                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                ggCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACTTTTATCGGAGTGTTGATGATATTCACTTTGGTGCC‑TGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTAtccggtcc                                                                                                                                                                                                                                             <  1:121150/251‑1 (MQ=255)  gctgttttccgtCAACAAGTCGCGCACCGTTTGGTTCGGCAGAGACTTTTATCGGAGTGTGTATGATATTCTCTTTGGTGCC‑TGGGGGG‑ACCTGGCTAAAGATTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATTCCAA‑TGCCGAAACCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTAtccggtcca                                                                                                                                                                                                                                            <  2:363368/240‑1 (MQ=255)        gTACTTCATCCATACGCGCACCGTTTGGTTCGGCAGAGACTTTTATCGGAGTGTTGATGATATTCACTTTGGTGCC‑TGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCgg                                                                                                                                                                                                                                       <  1:53374/250‑1 (MQ=255)                                       ggtagagaatgttATCGGGGTGTTGATGATATTCATTTTGGTGCC‑TGGGGTG‑ACCGGGATAAAGAGGGTTTTGATATCGACATCCCGCAGACGAATACAGCCAGAACTTACCCGCAGGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCtt                                                                                                                                                                                                       <  2:238053/240‑1 (MQ=255)                                        gCAGAGACTTTTATCGGAGTGTTGCTGCTATTCGCTTTGTTGCC‑TGGGGGG‑ACCTGGCTAAAGAGTGTTTTGATATCGTAATCCCGCCGAAGCATACAGCCAGCACTTCCCAGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGACGCAAATAAACGACGCAATAGACCGCCCGGCGAATCGCGTGATGGCACAATGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCttggcttt                                                                                                                                                                                                      >  2:334815/1‑244 (MQ=255)                                                   attCGGAGTGTGGAGGATATGCACTTTGGTGCC‑‑GGGGTGGACCTGGCTAAAGAGTGTTTTGATAGCGTCATCCCGCTGACGAATCTAGCCAGAACTTACCCGCATCCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACGCAATTCCCTGTGCTTTATAACGGgcg                                                                                                                                                                                            <  2:282616/248‑1 (MQ=255)                                                      cGGAGTGTTGATGATATTCACTTTGGTGCC‑TGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCgg                                                                                                                                                                                         <  1:572670/250‑1 (MQ=255)                                                        gAGTTTTGATGATATTCACTTTGGTGCC‑TGGGTTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCTGCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATg                                                                                                                                                                                      <  1:164524/251‑1 (MQ=255)                                                         agttgttatgatATTCACTGTGGTGTC‑TGGGGTG‑ACCTGGCTAAATAGTGTTTTGATATCGTCATCCAGCAGACTAATACTGCCTGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTTCCTGTGCTTTATAACGGGCGCTGATGt                                                                                                                                                                                     <  1:472608/244‑1 (MQ=255)                                                           ggtTGATGATATTCTCTTGGGTGCCGTGGGG‑G‑ACCGGGCTAAAGATTGTTTTGATACCTTCATCCCGCAGACGAATACAGCCAGAACTTACCCCCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGttt                                                                                                                                                                                   <  2:295698/250‑1 (MQ=255)                                                                atgatATTCACTTTGGTGCC‑TGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGt                                                                                                                                                                              >  1:296901/1‑251 (MQ=255)                                                                              ggTGCC‑TGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGtt                                                                                                                                                                 <  1:601741/250‑1 (MQ=255)                                                                              ggTGCC‑TGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTg                                                                                                                                                                >  1:226937/1‑251 (MQ=255)                                                                                 gCC‑TGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGt                                                                                                                                                             >  1:391387/1‑251 (MQ=255)                                                                                     tGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGGCATCCCGCAGACGAATACAGCCAGAAATTACGAGCATGCAAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAAAGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATGGGGTTATCCGGTCCAGGCGGCACTACCGCAGGAAACTCAATTACCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTGGGAGTCCAGGTTgggatgg                                                                                                                                                          >  1:119942/1‑247 (MQ=255)                                                                                            gcccTGGGTAAAGGGTGTTTGGCAATCGTCTGCCCGCAGGCAAAAACGGCCAGAACTTACCCGCATGCCAA‑TGCCGAAACCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGtt                                                                                                                                                    <  2:268576/249‑1 (MQ=255)                                                                                              ccTGGCTAAAGAGTGTTTTGATATCGCCATCCCGCAGACGAAAACAGCCAGAACCTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAACCGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGtttt                                                                                                                                                  <  2:208884/251‑2 (MQ=255)                                                                                                 ggCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGGTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGATGGGTTTGCACGTTTGTCt                                                                                                                                               >  1:374554/1‑251 (MQ=255)                                                                                                   cTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCCGGTTGGGTTTGCACGTTTGTCTg                                                                                                                                              >  2:489144/1‑250 (MQ=255)                                                                                                           tgtTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACggtgg                                                                                                                                     >  1:174727/1‑251 (MQ=255)                                                                                                                  atatCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCAt                                                                                                                              >  1:189384/1‑251 (MQ=255)                                                                                                                   tatCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGCATCGCATGATGGCCCAATGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGAACGTTTGTCTGAAACGGTGGTCACCAtt                                                                                                                             >  2:537861/1‑251 (MQ=255)                                                                                                                         cATCCCGCAGACGAATACAGCCAGATCTTATCCGCATGCCAA‑TGCCGAAATCGTCGTTCGTACCATGTAGCAAATAACCGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGgt                                                                                                                       <  1:509930/251‑1 (MQ=255)                                                                                                                            cccGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTc                                                                                                                    >  2:523159/1‑251 (MQ=255)                                                                                                                              cGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTc                                                                                                                    >  1:501067/1‑249 (MQ=255)                                                                                                                                cAGAGGAATACAGCCAGAACTTACCCGCA‑GCCAAATGCCGAAAACGGGGGTCGTACCATGAAGAAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCg                                                                                                                <  2:174727/251‑1 (MQ=255)                                                                                                                                  aaCGACTACAGCCAGACCTTACCCGCATGCAAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCgtg                                                                                                              <  1:455508/250‑1 (MQ=255)                                                                                                                                       aTACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAGACGGTGGTCACCATTGTCGGTGTCAGCGTGTcacc                                                                                                         >  1:536489/1‑251 (MQ=255)                                                                                                                                          cAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCAc                                                                                                                                                                                                                                    <  1:159338/125‑1 (MQ=255)                                                                                                                                          cAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGACGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCAc                                                                                                                                                                                                                                    >  2:159338/1‑125 (MQ=255)                                                                                                                                                    ttACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGAcc                                                                                             >  1:379452/1‑250 (MQ=255)                                                                                                                                                      aCCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAAt                                                                                          >  1:267901/1‑251 (MQ=255)                                                                                                                                                            aTGCCAA‑TGCCGAAATCGGCGTTAGTACCATTAAGCAAATAAACGCCGCCATAGGCCGCCAGCCGAATCGAATGATGGCCCATTAGGTTATCCGGTCCAGCCGGCACTACCGCAGACAACTCAATTCCCTGTGCTTTATAACGGTCGCGGAATTTTGCCGTTGGCGTCCAGGATGGGTTTGCACTTTTGGCTGAAACGGTGGTCACCATTGTCGGTTGCAGAGTGTCCCAACCTAACTGTCCAGTAcattt                                                                                    >  2:67885/1‑247 (MQ=255)                                                                                                                                                                 aa‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGAt                                                                               >  1:121966/1‑251 (MQ=255)                                                                                                                                                                  a‑TGCCGAAATAGGCGGTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCACTTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGGGGTCACCATTGTCGGGGGCCGCGGGTCACCACCTAACTGACAAATACCTATTGGAt                                                                               >  2:655065/1‑250 (MQ=255)                                                                                                                                                                        gAAAACGGTGTTCGTACCAGGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACgg                                                                         <  2:236030/251‑1 (MQ=255)                                                                                                                                                                         aaaTCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTc                                                                                                                          >  1:630953/1‑201 (MQ=255)                                                                                                                                                                          aaTCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAACTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCATCGTGTCACCCCCTAACTGCCCAATACCTATTGGATACACGGtt                                                                       >  2:325528/1‑251 (MQ=255)                                                                                                                                                                              ggCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCAGTGGGTTATCCGGTCCCGCCGGCACTACCGCAGGCAACGCAATTCCCTGTTCTTTATAACGGGCGCGGAGGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTGTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCg                                                                   <  1:334815/251‑1 (MQ=255)                                                                                                                                                                                    cGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAAtttt                                                             <  1:505391/251‑1 (MQ=255)                                                                                                                                                                                        ccATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCCCTACCGCAGGCAACTCAATTCCCTGTGATTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTAcc                                                         >  1:645057/1‑251 (MQ=255)                                                                                                                                                                                        ccATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGATTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATCACGGGCGCGGCTGTTTGCCGTTGGCGTCCAGGTTGGGGTTGCACGTTTGTCTGACACGGTGGTCACCATTTGCGGTGTCAGCGTCTCACCACCTAACTGCCCAATACCTATTGGATACACCGGTACCGCATTTTTaac                                                         >  2:326966/1‑249 (MQ=255)                                                                                                                                                                                        acATGGAGCAAATAAACGCCGCCATAGTCCGCCATACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCTGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTTGCGTCCATGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTAcc                                                         <  1:608117/250‑1 (MQ=255)                                                                                                                                                                                         cATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGATGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGTTACACGGTTACCGAATTTTTAccc                                                        >  1:54219/1‑251 (MQ=255)                                                                                                                                                                                           ataatcAAATAAACGCCGCCAAAGGCCGCCAGACGAAGCGCATGATGGCCCATTGGGTTATCCGGGCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTACCcgg                                                      <  2:296901/246‑1 (MQ=255)                                                                                                                                                                                             aaGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCCGGTTGGGTTTGCACGTTTGTCTGCAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAATTGACCAATACCTATTGGAAACACGGTTACAGAATTTTTACCcggcg                                                    >  2:214883/1‑251 (MQ=255)                                                                                                                                                                                                      aaCGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTACCCGGCGGGTAGTAAt                                           >  1:429412/1‑251 (MQ=255)                                                                                                                                                                                                          ccgccATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGCTACACGGTTACCGAATTTTTACCCGGCGGGCAGAAATag                                         >  1:611775/1‑249 (MQ=255)                                                                                                                                                                                                            gccAGAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTACCCGGCGGGTAGTAATAGAGAc                                     <  1:523159/251‑1 (MQ=255)                                                                                                                                                                                                              cATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGaaa                                                                                                                                           >  2:85656/1‑147 (MQ=255)                                                                                                                                                                                                              cATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGaaa                                                                                                                                           <  1:85656/147‑1 (MQ=255)                                                                                                                                                                                                                                  gCATGATGGCCCATTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTACCCGGCGGGTAGTAATAGAGACGCAGCTCCGCAATGTTGATcac               <  1:83587/251‑1 (MQ=255)                                                                                                                                                                                                                                   cATGATGGCCCATTGGGTTATCCGGTCCCGCCGGCACTACCGCAGGCAACTCACTTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCCCGTTTGTCTGAAACGGTGGTCACCATTGTCGTTGTCAGCGTGTCACCACCTCACTGACCAATACCTATTGGCTACACGGTTACCGAATTTTTACCCGGCGGCTAGTCATATAGACGCACCTcccccctgtttgtcac               >  1:145242/1‑236 (MQ=255)                                                                                                                                                                                                                                    atgaagcccaaTTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCCATTCCCTATGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGATGGGTTTGAACGTTTGTCTGACACGGTGGTCACCATTGTCGGCGTCAGCGGGTCACCACCTACCTGACCAATACCTATTGGATAAACGGTTACCGTATTTTTACCCGGCGGGAAGTAATTGAGCCGCAGACCCTCAATGTTGATtaca              >  2:297973/11‑250 (MQ=255)                                                                                                                                                                                                                                     ggatgGCCCATTGGGTTATCCGGTACAGCCTGCACTCCCGCAGGCAACTCAATTCCCGGTGCTTTATAACGGGCTCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCTCCGAACTGACCAATACCTATTTGATACACTGTTACCGAATTTTTACCCGGCTGGTAGTAATAGAGACGCAGCTCCGCAATGTTGATTACAAt            <  2:645057/250‑1 (MQ=255)                                                                                                                                                                                                                                              aTTGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAACTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTACCCGGCGGGTAGTAATAGAGACGCAGCTCCGCAATGTTGATCACAATGCCTTcgcg   <  1:325528/251‑1 (MQ=255)                                                                                                                                                                                                                                               ttGGGTTATCCGGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTACCCGGCGGGTAGTAATAGAGACGCAGCTCCGCAATGTTGATCACAATGCCTTcgcgc  >  1:312172/1‑251 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                GGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACTTTTATCGGAGTGTTGATGATATTCACTTTGGTGCC‑TGGGGTG‑ACCTGGCTAAAGAGTGTTTTGATATCGTCATCCCGCAGACGAATACAGCCAGAACTTACCCGCATGCCAA‑TGCCGAAATCGGCGTTCGTACCATGAAGCAAATAAACGCCGCCATAGGCCGCCAGACGAATCGCATGATGGCCCATTGGGTTATCCAGTCCAGCCGGCACTACCGCAGGCAACTCAATTCCCTGTGCTTTATAACGGGCGCGGATGTTTGCCGTTGGCGTCCAGGTTGGGTTTGCACGTTTGTCTGAAACGGTGGTCACCATTGTCGGTGTCAGCGTGTCACCACCTAACTGACCAATACCTATTGGATACACGGTTACCGAATTTTTACCCGGCGGGTAGTAATAGAGACGCAGCTCCGCAATGTTGATCACAATGCCTTCGCGC  >  NC_000913/1169590‑1170075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑