| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,138,533 | C→T | G52G (GGC→GGT) | flgK → | flagellar hook‑filament junction protein 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,138,533 | 0 | C | T | 95.5% | 121.7 / NA | 47 | G52G (GGC→GGT) | flgK | flagellar hook‑filament junction protein 1 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (19/23); minor base G (2/0); total (23/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGCTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGAC > NC_000913/1138287‑1138755 | gTATGAACATGGAAAATCTGTTCTGAATAACTCAAGTCGGGGGGGTCGCGGCGGATAAGACTCTGTAATTGAAGGCTTATAAGGATCCTCCATGCCCAGCTTGATTAAAAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTg‑gg < 2:313207/251‑1 (MQ=255) gTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCt < 1:519613/247‑1 (MQ=255) gtcggAATAACCAAAGTCCGGCGGGTGTCTGCCGATAATCCTTTGTAATTGAAGGCTTTTAAGGAACCTCCATGTCCAGCTTGATTAAGAACGCCAGGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCCCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGt < 1:471338/246‑1 (MQ=255) gaaaaacccAAGTCCGGGGGGTCGCTGCGGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCAGGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCCCCAGTTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTc < 2:271793/241‑1 (MQ=255) gAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTc < 1:291908/249‑1 (MQ=255) tAACTCAAGTCCGGCGGGTCGCTGCCGCTAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGAGCTGGCGGGTG‑GGGTGGGCATGGTGTCTACGTTTCTtgtg > 1:353946/1‑251 (MQ=255) aCTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGGTGGCCATGGGGTCTACGTTTCTGGtgtg > 1:208345/1‑251 (MQ=255) ccGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTT‑GGGTGGCAATGGGGTTTACGTTTCTGGTGGGCAgagggg > 1:495497/1‑246 (MQ=255) gcggGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCCCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTa < 1:82851/251‑1 (MQ=255) atactcctaaatggAAGGCTTTTAGGGAACCGCCACGTCCAGCTTGATTAAGAACGCCAGGAGCGGACTGACCGCGGCCGGGGCGGCGTAAAATACGGCAAGTATTAATATCTCCAGCTAGAACGTGTCTGTATAGACCCGCCAAAGCACTATTATGGCGCAGGCCAAGAGCTCGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTacca < 2:133728/238‑1 (MQ=255) taCTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCCATGGGGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTacca > 1:439524/1‑250 (MQ=255) aCTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTaccaac < 1:180865/251‑1 (MQ=255) gTAAGTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑tt < 1:626952/251‑1 (MQ=255) aaTTGAAGGCTTATAAGGACCCCCCATGCCCAGCTTGATTAATACCGCCATGAGCGGACTGAACCCGGCCCAGGCGGCTTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGTATATCCCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTTAGTATGATGCGTTTATTACCAACCAG‑TTAc < 1:160878/251‑1 (MQ=255) cTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCCATGGTGTCTTCGTTTCTTGTGTGCAGCGTGGGTATGATGCGTTTTTTACCAACCAG‑TTACGTTCGgcgc > 1:321349/1‑251 (MQ=255) tataAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACG‑CAAGGAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTT‑GGTGGGCAATGGGGTCTACGGTTCTGGGGTGCAGGGGGGGTATGAGGCGTTTTTTTCCCACCAG‑TGTCGTGTGgcgc > 1:141790/1‑248 (MQ=255) aaGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTGGGGAATGGTGTCTACGTTTTTGGTGTGCAGCGTGAGTGTGGTGCGGTTATTACAAACCCA‑TTACCTGGGGCGCATACg > 2:602431/1‑251 (MQ=255) gTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCCG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTc > 1:28125/1‑251 (MQ=255) ataaCGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCCCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTAt < 1:189999/251‑1 (MQ=255) aaCGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCCCTGGCGGATG‑GGTTGGGAATGGGGTCTACGTTTTTGGTGGGCAGCGTGAGGATGAGGCGTTTATTAACCACCAG‑ATAAGTGCGGCGCAGACGCAAAGGAGCggcacgactgcacgcaatt > 1:540782/1‑233 (MQ=255) gAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCACCAGCTATAACGTTGCCGGATATACCCGCCAAACAACTATTACGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGATG‑GGTTGGCAATGGAGGCAACGATTCTGGCGTGCAACGAGAGTATGATGAGCTTATTACCAACCAG‑TTTCGGACGGCGCCGACGCCAAGTAGCGGTCTGACAGCCCGCtctgtgccgaggg > 2:347438/1‑239 (MQ=255) aaCGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTT‑GGTTGGCCATGGGGGCTACGTTTCTGGTGTGCAGCGTGAGGCTGATGGGTTTATTACCCACCAG‑TTCCTTGCGGCGCAGACGCAAAAGAGCGTTCTTACTGCCCGCTATTAAAAGATGTCGAAAAt > 2:531339/1‑248 (MQ=255) cgcgGCCCAGGCGGCGTTAAATCCGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACa < 1:571744/251‑1 (MQ=255) cgcgGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGGTGGCAATGGGGGCTAAGTTTCTGGTGTGCAGCGGGAGGATGGTGCGTTTAATACCAAACAG‑TTACGTGGGGCGCAGACGCAAAGTAGCGGGCTGAATGCCCGCCATGAGCAGGAGTCGACAATCGAc > 1:79148/1‑250 (MQ=255) ccagggcggcGTTAAAACCGTCAAGTAATAATAGACCCAGCTAAAACGTGGCTGGATATACCCGCCAAACCACTAATATGGCGCAGGCGAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCGACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATg < 2:28125/247‑1 (MQ=255) cgTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTTCCGGATATACCCGACAAAACACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGGTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGGGAGTATAGTGCGTTTATTACCAACCCG‑TTTAGTGCGGGGCAGACGCAAAGTAGCGGTCTGGCTGTCCGCTATGAGCAGCTGTCGAAAATCGACCATAAGCTCTccacc > 1:590104/1‑251 (MQ=255) gTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGGGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAAACGACAATATGGTCTccacac > 1:88621/1‑249 (MQ=255) taaatctggctaGTAAAAATATCCCCAGCTATATCGGTGGCGGTAATCCCCGCCAAACCTCTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAg < 2:226917/239‑1 (MQ=255) cGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCCAAGTAGCGGTCTGACTGCCCGCTATGAGccg > 2:285587/1‑210 (MQ=255) cGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAg < 1:285587/212‑1 (MQ=255) ggCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGGCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCCGTACCTCtt > 1:438303/1‑251 (MQ=255) tatCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGGTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGGGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGCCGCCAAGTAGCGGGCTGACTGCCCGCTATGAGCAGATGGCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAacac > 1:621818/1‑251 (MQ=255) atCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTAt < 1:568868/192‑1 (MQ=255) atCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAacca > 1:536420/1‑248 (MQ=255) atCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGGGTCTACGTTTCTGGTGGGCAGCGGGAGGATGATGCGTTTATTAACAACCAGGTTAGGT‑CGGCGCAGACGCAAAGGAGCGGTCTTACTGCCCGCTAt > 2:568868/1‑192 (MQ=255) aaCGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGGGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGGCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGGCAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGAttt > 1:195518/1‑251 (MQ=255) atccccGACAAACCATTACTTTGGCGCAGGCCAAGAGCACGGTGGGCGCTGGCGG‑TGTGGGTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCACGCTATGAGCCGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAAAACAGATGCAGTATTTCTTCTCCAGcat < 2:353946/247‑3 (MQ=255) ccaaCCACTATTATGGCGCAGGCCAATAGCACGTTGGGTGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTTTGGTGTGCAGCGTGAGTATGATTCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGCCTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCCCCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCt < 2:13508/249‑1 (MQ=255) caacccACTATTATGGCGCAGGCCAATAGCACGTGGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCt < 2:438303/247‑1 (MQ=255) cAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGAGGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCt < 1:50964/251‑1 (MQ=255) aCCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGGTGGCAATGGGGTCTACGTTTCTGGTGTGCAGCGGGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGGCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGGACCTCTTCGCTGGCCACACAGATGCAGGATTTCTTCACCCGCCTGCCAACGCTggg > 1:603310/1‑250 (MQ=255) attatGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGGCATGGTGTCCACGTTTCTTGTGTGCAGCGTGAGGATGATGCGTTTATTACCAACCAG‑TTTAGTGTGGCCCAGACGCAAAATAGCGGTCTGACTGCCCGATATATGCAGATGGCGAAAATCGACAATATGCTCTTCACAAGTACCTCTTCGCTGGCACCACAGATGCAGGGTTTCTTCACCCGCCTGCAAACGCTGGTGAGTa > 1:587391/1‑250 (MQ=255) attatGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGGGTTTACGATTCTGGGGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACTCAAAGTAGAGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTaa < 2:185552/251‑1 (MQ=255) atGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAAcg < 1:628151/250‑1 (MQ=255) cAGGCCAATAGCACGTTGGGCGCTGGCGGGTG‑GGGTGGCAATGGTGGCCACCTTTCTGTGGGGCCGGGTGAGGATGATTCGTTTTTTACCAACCGG‑TTACGTTCGGGGCCGACGCACAATAGCGGGCTTACTGCCCACTATGAACCGATATCGAAAAACGACAACATGCGCTCCACCAGTACCTCTTCACTGGCAAACCATCTACAGGGTTTCTTCACCCGCCTGCAAACGccagggaataaagcaggagg > 2:525660/1‑232 (MQ=255) aGGCCAATAGCACGTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGAc < 1:478712/251‑1 (MQ=255) gTTGGGCGCTGGCGGTTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGccc < 1:171250/122‑1 (MQ=255) | GTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGCTG‑GGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAG‑TTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGAC > NC_000913/1138287‑1138755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |