| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,138,152 | C→T | T261I (ACC→ATC) | flgJ → | putative peptidoglycan hydrolase FlgJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,138,152 | 0 | C | T | 98.6% | 209.0 / NA | 70 | T261I (ACC→ATC) | flgJ | putative peptidoglycan hydrolase FlgJ |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (32/37); total (32/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGACCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAAT > NC_000913/1137906‑1138395 | cacgggAATCTGGTTGGGGCAAACGGCAACTCCGCCGCGAAAACGGTGAGCCGAGCGATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATTAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTACCCCTCGC‑TACGCCGCCGTGACGAtcgcc < 2:270064/247‑1 (MQ=255)cACTGGAATCTGGTGGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGAtcgcc < 1:128576/251‑1 (MQ=255) tCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGc > 1:233591/1‑251 (MQ=255) gttggggggCACCGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑a < 1:163626/247‑1 (MQ=255) ggacAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACATGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCTCGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAggg < 1:518137/248‑1 (MQ=255) ggCAAGGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAgggg < 1:164002/251‑1 (MQ=255) aaCGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGGTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAACATTGTCGGATTACGTTGGGCTGTTAACGAGTAAACCGCGC‑TACGCCGCCGTGACGTTCGACGCGAGTGGGG‑AACAGGGGgcg > 2:633648/1‑251 (MQ=255) cGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCa < 1:395251/251‑1 (MQ=255) aaTCCGCCGCGAAAACGGCGAGCCGCGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACAGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGATCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCATAACCCGCGC‑TACGCCACCGTGACGATCGCCGCGAGTGGGG‑AACGGTGGGCGAAGGccc > 2:571744/1‑251 (MQ=255) gccgcGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGGAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGGGCGGCAAC‑GGGGGCGCCGGCCCtcacg > 2:193247/1‑247 (MQ=255) cgAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGAcg < 1:546767/251‑1 (MQ=255) ataACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATcc < 1:257439/250‑1 (MQ=255) aaCCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTc > 1:526468/1‑250 (MQ=255) aaCCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGCGCTATGCCACCGATCCTcc > 2:230581/1‑250 (MQ=255) aCCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCAc > 1:671268/1‑251 (MQ=255) ccTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTccct > 1:250871/1‑248 (MQ=255) tGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTccctct > 2:333474/1‑246 (MQ=255) gttcggtttCAAAGCTTCGGGAAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTAAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCGACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTa < 2:553603/241‑1 (MQ=255) gTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTa < 1:59398/249‑1 (MQ=255) gTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATg > 2:189999/1‑251 (MQ=255) aaaGCCTCTGGCAACTGGACAGGGCCAGTTACTGAAATCACCCCGACTGAATATGAAAACGGCGAAGCGAAGAAAGAAAAAGCGAAGTTTCGCGTCTAAAGCTAGTATCTGGAAGCCTTGTCGGATTACGTTGGGATGTTAACGCGTCACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGAGCGG‑AAAGGGGGGCGCCGGCCCTACAGGACGCGGGCAATGCCACCGATCCTCACTATACCCCCAAAc > 2:403926/1‑250 (MQ=255) aaaGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACt > 1:209083/1‑251 (MQ=255) tGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCa < 1:526597/221‑1 (MQ=255) ccAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGCATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGCTTCAGCAGATGa > 1:84325/1‑250 (MQ=255) aCTGAAATCACCACGACTGAATATGAAAACGGCGCAGCGAAGACAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGAATACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTCTGCCCGCAAACTCACCAACATGATTCAGCAGATGAACTCGAt > 2:82851/1‑251 (MQ=255) aCTGAAACCACCACGGTCGAATATGAAAACGGCGAATCGAAGAAAGTAAAAGCGAAGTTTCGCGTTTACATCTCGTATCTGGAACCCTTGTCGGATTCCGTTTGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGCCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGa < 2:246766/250‑1 (MQ=255) cggaaacccccccggttGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCTTCTACATCTCGTATCTGGAAGCCTTGGCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATa < 2:547810/235‑1 (MQ=255) tGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATa > 1:489790/1‑250 (MQ=255) gAAATCACCACGACTGAAAATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGTGTTTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGGTGGGCTGTTACCGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATTAAATCGATa < 2:680632/249‑1 (MQ=255) gAAAACACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTGCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGGTGGGCTGTTAACGCGTAACCCGGGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATaa < 1:396992/250‑1 (MQ=255) aaaTCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGc > 1:185552/1‑251 (MQ=255) caccacGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTAGCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGAc < 1:406705/250‑1 (MQ=255) gACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTGGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAg < 1:570248/166‑1 (MQ=255) gACTGAATATGAAAAAGGCGCAGCGAAGAAAGTAACAGCGAAGTTTCGAGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGAGGGCGCAGGACCTTCAg > 2:570248/1‑166 (MQ=255) cacgaaaactggcaatcgaagAAAGACAAAGTGAAGTGTGGCGTCTACAGCCGGGAGCTGGAACCCTTGACGTATTACGTGGGCCTGTTAGCGCGTAACC‑GTGCCTACTCCGCCGCGACGACCGCCGCGTGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTAGGCCACCGATCCTCACTATGCCCGCAAACTCGCAAACATGATGCAGCAGAGGAAAGCGCTAAGCCACAAGGTGAGcggaa < 2:301341/234‑5 (MQ=255) gAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCt > 1:481879/1‑250 (MQ=255) aaaaCGGCGAAGCGAACAAAGTAAAAGCGAAGTTGCGCGTTGACAGCTCGTTACTGGAAGCCTAGTCGTATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACATGGTGAGCAAATCCTAc < 2:150061/251‑1 (MQ=255) gcgaagAAATTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACAt < 2:489790/251‑1 (MQ=255) aagaaAGTAAAAGCGAAGGTTCGCGTCTACAGCTCGTATCGGGAAGCCTTGACGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCGACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGa < 1:315208/251‑1 (MQ=255) agaaAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTACCCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGAt < 1:63409/251‑1 (MQ=255) agaaAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGACCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGAGACAAGGTGAGCAAAACCTACAGTATGAACATTGAt > 2:478712/1‑251 (MQ=255) aaGTAAAAGCTAAGTTGCGAGTCTGCAGCCCGAATCAGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑GACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCGCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAAt < 2:255959/251‑1 (MQ=255) aaGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAAt < 1:193247/251‑1 (MQ=255) aaaaatggatgTTTCGCGTCTCCAGCTCTTATCGGGAAGCCTTGTCGGTTTACGTTGGGCTGTTAACTCGTAACCCGCGC‑TCCGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCt < 2:569945/240‑1 (MQ=255) aaaaGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGt > 1:133728/1‑251 (MQ=255) aaaGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGGGCAAAACCTACAGTATGAACCTTTATAATCTGtt > 2:561995/1‑251 (MQ=255) aaaGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGtt < 1:614261/251‑1 (MQ=255) aaGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTAAGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTc > 1:528039/1‑251 (MQ=255) aaGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAAt < 1:559829/251‑1 (MQ=255) gTTTCGCGTTTACAGCCCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTACCCCGCGC‑TCCGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATaa < 2:526468/251‑1 (MQ=255) cgcgTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCa < 1:566448/251‑1 (MQ=255) tCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTc > 2:519613/1‑251 (MQ=255) aCAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTcc < 1:230581/249‑1 (MQ=255) aGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTCCAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCcggcg > 1:453967/1‑251 (MQ=255) cGTATCTGGAAGCCTGGTCGGCTTACGGTGGGCTGTTAACGAGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGGCGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTc < 1:251021/251‑1 (MQ=255) aTCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc < 1:554875/250‑1 (MQ=255) ggAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTg < 1:403926/248‑1 (MQ=255) ggAAGCCTTGTCGGATTACGTTGGGCTATTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGcc < 1:226963/250‑1 (MQ=255) gAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCg > 1:313207/1‑250 (MQ=255) aGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGATATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGCCCCTGCCGat > 1:295903/1‑250 (MQ=255) aTTACGTTGGGCTGTTAACGCGTAACCCGCTA‑TCCGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACATGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCACACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACaat < 2:406533/167‑2 (MQ=255) aTTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAAt < 1:433488/200‑1 (MQ=255) aTTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAAt > 2:433488/1‑200 (MQ=255) aTTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGACGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAg > 1:406533/1‑167 (MQ=255) gCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTAc > 2:129543/1‑172 (MQ=255) gCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTAc < 1:129543/172‑1 (MQ=255) gTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCCGATGAAATCGATAAGCGCCAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGGTAATACTCTGTAATTGAAGGCTtat > 2:628151/1‑250 (MQ=255) aaCCCGCGC‑TACGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTcc > 1:169544/1‑251 (MQ=255) aCGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCt < 1:551426/251‑1 (MQ=255) aCGCCGCCGTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAAGACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCt < 1:75406/251‑1 (MQ=255) cgccgTGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGAt < 1:109683/251‑1 (MQ=255) tGACGATCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATtaat > 1:13508/1‑250 (MQ=255) | CACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGC‑TACGCCGCCGTGACGACCGCCGCGAGTGCGG‑AACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAAT > NC_000913/1137906‑1138395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |