| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 309,985 | T→A | G14G (GGA→GGT) | ecpB ← | putative fimbrial chaperone EcpB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 309,985 | 0 | T | A | 98.7% | 241.9 / NA | 77 | G14G (GGA→GGT) | ecpB | putative fimbrial chaperone EcpB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (33/43); minor base C (1/0); total (34/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAAGAAGCGGATCACTTCGCTGGCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAGGTGAAACCATCCTGTGCGGTGG > NC_000913/309739‑310226 | gaagaaGCGGATCACTTCGCTGGCTTGGGCGGGTAGCAGCACGCTGGCGGGCGTGAGCAGCAACTCATCCGGCTTGTCCCTTGAGGTAACCTGCCCGTCGTCAAGCGGTGAAGAGGGCCGTTCGAGACGGATATTGATTAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCCGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCgg > 1:261692/1‑251 (MQ=255) aagCGGATCACTTCGCTGGCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCCTTGGGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGAAATTGTTAAGGCGAACACTGTCGGAACTGTTTTTGATCGGTTTGCTCAGGGGGCTGCTG‑GCACTGTTCCTTAACGGTGATATATCGCCGACATCCAGCGCCTGGGCCGGAGGATATACCGGaa > 2:413051/1‑250 (MQ=255) ggATCACTTCGCTGGCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAAcagc < 1:166796/251‑1 (MQ=255) aTCACTGCGCTGGCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGATAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAAcagcag < 2:262645/251‑1 (MQ=255) tCACTTCGCTGGCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGGACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTTTTCATAAACGATGATATATCGCCGACCTCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAAcagc > 1:450054/1‑248 (MQ=255) cccTTCGCTGGCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGGGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAAc < 2:579489/242‑1 (MQ=255) cACTTCGCTGGCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAAc > 1:579489/1‑244 (MQ=255) ggctgtctgggtcgggtagtgtcaAGCTTGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGGCAAGCGGTGAAGAGAGCCGTTTGTGACTGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCATCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCTGAG‑ATATACCGGAAAACAGCAGAGCgag < 1:438595/228‑1 (MQ=255) cGCTGGCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCgaga < 2:220359/251‑1 (MQ=255) ggCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCa < 1:364820/251‑1 (MQ=255) gCTTGGGCGGGAAGCAGCAAGCTGGCGGGAGAGAGTAGCAACACATCCGGCTTGTCCATTGGGATAACCTGCCCGTCGTCAAGCGGTGCAGCGAGCCGTTCGAGAAGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATAGTTTTGCTAAGAGTGCGGCTG‑TCACTGGTCATATACGTTGATATATAGCCGACATCCAGCGCCAGGGGCGGGG‑ATATCACGGAAAACAAGAGAGAGAGAGGc > 2:583905/1‑249 (MQ=255) tGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGGTTTTCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGaa < 2:489628/250‑1 (MQ=255) gggCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAgg < 1:317297/251‑1 (MQ=255) gggTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTCTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAACCAGCAGAGCGAGAGGCAGAAGGTGCt > 1:223821/1‑251 (MQ=255) ggTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTGGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCtt < 2:55434/251‑1 (MQ=255) agcagcAATCGGGCGGGAGGGACTAGCAACTAATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCTGGGAAGAGAGCCGTTCGAGAAGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTGTGCTCAGCGTGCTGCTG‑TCACTGGTCATAAACGATGATATAGCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCttttt < 2:646293/251‑1 (MQ=255) gtgagtAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAAt < 1:436791/242‑1 (MQ=255) gtgagtAGCAACTAATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGCTAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACCTCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAAt > 2:436791/1‑242 (MQ=255) gtgaggAGCAACTCATCCGGCTTGTCCATTGAGATAACCGTCCCGACGTCACGCGTTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCTGTACTGTTTTTTAGCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATGCCGTCCAg < 2:275198/251‑1 (MQ=255) gCAACTCAGCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCTACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATaaa < 2:566694/251‑1 (MQ=255) tGTCCATTGCGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGTCGGATATTGATAAGGCGACCATTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACAGCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTAc < 2:613371/249‑1 (MQ=255) tCCATTGAGATAACCTGCCCGTCGTCAAGCTGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTAcccc < 2:308742/250‑1 (MQ=255) tCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGCCATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTAcccc > 1:308742/1‑250 (MQ=255) ccATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCct < 1:39716/250‑1 (MQ=255) ccATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGAGAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCct < 1:112442/250‑1 (MQ=255) aCCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCa < 1:413051/251‑1 (MQ=255) cccGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCagag > 1:148102/1‑249 (MQ=255) cccGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACACCTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCagagag < 2:159461/251‑1 (MQ=255) cgtcgtCAAGCGGGTAAGGGTGCCGTTCGAGATGGATATTGATAAGGCGACCTCTGGCGGTTCTGTTTGTGATCGTGTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGGCCAGGAATAAAGCAGGGGGTCTACCCCTGCTGGTATATCAGAGAGAt < 2:99739/251‑1 (MQ=255) cGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAACGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGCAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTcc > 1:112277/1‑251 (MQ=255) ggTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTCTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCa < 2:223821/251‑1 (MQ=255) gTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAg < 1:389263/251‑1 (MQ=255) agagCCGGTCGAGACGGATATTGATAAGGCGACCACTGTCGTTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCATGTcgcg < 2:209885/251‑1 (MQ=255) agCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTc < 1:147464/251‑1 (MQ=255) ccGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGGTTTGCTCAGCGTGCTGCTG‑GCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑AGGTACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTa < 1:613047/205‑1 (MQ=255) cGTTCGAGTCGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGTGTCGaa < 2:143028/251‑1 (MQ=255) gagaCGGATATTGATACGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGGGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAgggg > 2:227860/1‑194 (MQ=255) gagaCGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAgggg < 1:227860/194‑1 (MQ=255) agaCGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTAc < 1:593481/251‑1 (MQ=255) cGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGCGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAAATTAACTGGACCAGGGCGCTACGAACTGTACGcc > 2:1556/1‑250 (MQ=255) gATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGCGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGGACGCTa > 2:309049/1‑250 (MQ=255) tgagaaGGCGACCTCGGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATAAATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTc < 2:595299/246‑1 (MQ=255) aTAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGGCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTcgcc > 1:190784/1‑251 (MQ=255) aaGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCTTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACATCAGAGCGAGAGGCAGa < 2:537382/136‑1 (MQ=255) aaGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGa > 1:537382/1‑136 (MQ=255) aGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATAGATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCt < 1:640529/251‑1 (MQ=255) gCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTcc > 1:570130/1‑251 (MQ=255) cGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCa < 1:118266/251‑1 (MQ=255) gACCACTGTCGGTACTGTTTTTGATCGTTTTGCTAAGAGTGCTACTA‑TCACTGTTCATAAACGTTAATATATCGCCGACATACAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGAGAGCGGCAGAAGGTGCTTTTTACTAACAATTCCGTCCAGGAATAAAGACGGGGGGCTACCCCTGCTGGTACATCAGAGAGAGTAACTGGTCATGGTCGCGACGCACTGTAAGCTAAAGTCGCCGCTcc > 2:516597/1‑249 (MQ=255) ccACTGTCGGTACTGGTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGAt < 1:661172/251‑1 (MQ=255) cctgttgttACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTT‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTACATCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATCAACGGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGTCGCTCCAGATGc < 2:197786/243‑1 (MQ=255) tGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCt > 1:571011/1‑251 (MQ=255) gTACTGTATTTGATCGTTTTGCCCAGCGTGATGCTGGTC‑CTGTTCATAAACGATGATATAACGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAATACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTTCATCAGAGAGATTAACTGGTCCAGGTCTCGTCGAACTGTACGCTAACGTCGCCGCTCCATATGCCTTc < 2:556172/248‑1 (MQ=255) tACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGt > 1:155379/1‑251 (MQ=255) aCTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGt > 1:581250/1‑250 (MQ=255) tGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGt > 1:163641/1‑248 (MQ=255) gTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTagag < 1:62978/251‑1 (MQ=255) aTCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTa < 1:309049/251‑1 (MQ=255) gTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATc > 1:306663/1‑251 (MQ=255) tttgcgcaacgggctgctG‑TCTCTGTTCATAAACGATGATATTTCGCCGACATACAGCTCCTGGGGCGGAG‑ATATACCGTAAAACAGCAGAGCGAGTGGCAGAAGGTGCGGTTTCATAATAATGCCGTCCAGGAATAAAGCAGGGGGGCTACCTCTGCTGGTACATCAGAGAGATTAGCTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGTTGCCTTACGGTTGAGTTCTGTAATCt < 2:482300/238‑1 (MQ=255) tGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGtt > 1:665766/1‑251 (MQ=255) cGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGAAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGAAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGGCGAACTTGACGCTAACGTAGCCGCTCCAGCTGCCTTCCGGGAGAGTGCTGTAATCTGTTACTGCgg > 2:217706/1‑251 (MQ=255) gTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATACCAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCagagag > 1:562186/1‑163 (MQ=255) gTGCTGCTG‑TCACTGGTCATAAACGATGATATATCGCCGACAGCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCagagag < 2:562186/163‑1 (MQ=255) ctgctg‑TCACTGTTCATAAACGATGTTATATCGCCGCCATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAGCTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCggtggt > 1:550832/1‑251 (MQ=255) ctgctg‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCggtggt > 1:529916/1‑251 (MQ=255) g‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCAt > 1:8785/1‑251 (MQ=255) gCCGACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGACGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAgg > 1:679768/1‑251 (MQ=255) gACATCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAGGTg > 1:307763/1‑250 (MQ=255) aTCCAGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAGGTGAAAc > 1:334343/1‑251 (MQ=255) cacgcgcCTGGGGCGTAG‑ACATAACGGAAATCAGCAGCGCGAGAGGCAGAAGGTTCTTTTTCACAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTGCCCCTGCTGGTACATCAGCGACATTAACTTGTCCAGGTCTCGTGGAACTGTACGCTAACGTCTCCGTTCCAGATGCCTTCCTGGATATTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGGACCGCTTATGATGGAGAAGGGTAAACCa < 2:40561/248‑1 (MQ=255) aGCGCCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAGGTGAAACCATc < 1:464458/251‑1 (MQ=255) cgcCTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGCGAAGGTGAAACCATCCt > 2:507446/1‑251 (MQ=255) cTGGGCCGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAGGTGAAACCATCCtgtg > 1:439283/1‑251 (MQ=255) gggCCGTAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAGGTGAAACCATCCtgtg < 2:155379/249‑1 (MQ=255) cGGAG‑ATATACCGGACAACAGCAGAGCGAGAGGCAGCAGGTGCTTTTTCATAACAATTCAGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGCGATTAACTGGACCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAGGTGAAACCATCCTGAGCggtgg > 2:672810/1‑251 (MQ=255) cGGAG‑ATATACCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAGGTGAAACCATCCTGTGCggtgg < 1:565779/251‑1 (MQ=255) | GAAGAAGCGGATCACTTCGCTGGCTTGGGCGGGTAGCAGCAAGCTGGCGGGAGTGAGTAGCAACTCATCCGGCTTGTCCATTGAGATAACCTGCCCGTCGTCAAGCGGTGAAGAGAGCCGTTCGAGACGGATATTGATAAGGCGACCACTGTCGGTACTGTTTTTGATCGTTTTGCTCAGCGTGCTGCTG‑TCACTGTTCATAAACGATGATATATCGCCGACATCCAGCGCCTGGGCCGGAG‑ATATTCCGGAAAACAGCAGAGCGAGAGGCAGAAGGTGCTTTTTCATAACAATTCCGTCCAGGAATAAAGCAGGGGGGCTACCCCTGCTGGTACATCAGAGAGATTAACTGGTCCAGGTCGCGTCGAACTGTACGCTAACGTCGCCGCTCCAGATGCCTTCCGGTAGAGTGCTGTAATCTGTTACTGCGGTGGTACCATTGGTGGTACCGCTGATGATGGAGAAGGTGAAACCATCCTGTGCGGTGG > NC_000913/309739‑310226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |