| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 15,369 | T→A | intergenic (+71/‑76) | dnaJ → / → insL1 | chaperone protein DnaJ/IS186/IS421 family transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 15,369 | 0 | T | A | 96.1% | 148.1 / ‑1.8 | 52 | intergenic (+71/‑76) | dnaJ/insL1 | chaperone protein DnaJ/IS186/IS421 family transposase |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base A (10/39); total (12/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
ATTTGCTGTGCCGCGTTGTCGTCGAAACACCGGTAGGCCTGAACGAAAGGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCG‑AAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATT > NC_000913/15126‑15614 | aTTTGCTGGGCCGTGTTGTCGTCGAAACTCCGGTCGGCCTGAACGAGAATCAGAAACAGCTGCTGCAAGAGCTGCAAGAAATCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTGTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCATGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTgg < 2:429318/251‑1 (MQ=255) tGCTGTGCCGCGTTGTCGTCGAAACACCGGTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCg < 1:582369/250‑1 (MQ=255) cTGTGCCGCGTTGTCGTCGAAACACCGGTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGCAAAGTGGCgggg > 1:516477/1‑251 (MQ=255) ccGCGTTGTCGTCGAAACACCGGTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGagat > 1:59642/1‑247 (MQ=255) ggTTGCCGTCGAAACACCGGTAGGCCTGAATGAGAAGCAGAAACAGCTGTTGCAAGATCTGCAAGAAAGCTTCGGTGGACCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTGTGACGACCTGACTCGCTAACCTCCCCAAAAGCCTGCCCGTTGGCAGGATTGGGTAAAATTAGGGTTCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTcc < 1:455746/250‑1 (MQ=255) gtcgtcGAAACACCGGTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCAt < 1:345227/250‑1 (MQ=255) cgtcgAAACACCGGTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAg < 1:218810/251‑1 (MQ=255) gAAACACCGGTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGaacaaacccctcagacgc > 1:229314/1‑234 (MQ=255) aaccccGGTAGGCCTGTACAAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCATCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCGGACCCGCTAACCGCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAATTGGCGGGGATCACTCTCATAAGCGCTaa < 2:17864/247‑1 (MQ=255) aaCACCGGTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGGTCAcaacccacaaggaca > 2:574735/1‑236 (MQ=255) acacCGGTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAAc < 1:451476/251‑1 (MQ=255) cacCGGTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACt < 1:469343/251‑1 (MQ=255) gTAGGCCTGAACGAGAAGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑gg < 1:236775/251‑1 (MQ=255) agaagCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTAc < 1:538321/247‑1 (MQ=255) cAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGGACACTACCCCAAGCGCTAAATATAA‑GGGtgtgggatttgtcccg > 1:172517/1‑236 (MQ=255) gAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGGTGACTCCCCTAAGCGCTAACT‑Taaagggtggggggttatgcctgtt > 1:232317/1‑229 (MQ=255) gctgcaagagcggcaagaAAGCTGCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGAGGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTa < 2:376911/250‑1 (MQ=255) gctgcaagaAAGCTTCGGTGGCCCAACCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAt < 1:53315/251‑1 (MQ=255) caagaAAGCTGCGTTGGCCCAACCGGTGAGCACACCAGCCCGCGATGTAAGAGCTTCTTTGATGGTGAGAAGTAGTTTTTTGACGGTCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTGGGGTAAAAGTAGGGTGCGTTGAAGATATGCGAGAACCTGAAAAGTGGCGGGGATCTCTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAt < 2:152633/251‑1 (MQ=37) tcgctGGCCCAAACGGGGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGAACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAGGAATTACTCTCAc < 2:129217/246‑1 (MQ=38) ggTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGCTGGTGTGACGACGTTTTTTGACGACCTGACCCGCTAAACTCCCCAAAGGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGAGTACTCCCAAAAACGCATACA‑TAA‑AGGGTGTGGCATTACGCCCCATCTGAATTTATGTGCCGATGAATTAATCTCACgct > 1:286245/1‑249 (MQ=255) aCCGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa < 1:668826/251‑1 (MQ=255) ccGGTGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg < 1:432761/251‑1 (MQ=255) tgAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGGGGACTCCCCTAAGCGCTAACT‑TAAAGGGTT‑TGGTGTTTCGCCTGATATGATTTTACGTGGCGGTGGATTAATCTCACGATAAAAGGTTAGCAAt > 1:214277/2‑251 (MQ=255) acaGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGccc < 1:639051/251‑1 (MQ=255) caGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCa < 1:415108/251‑1 (MQ=255) agCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaa < 1:189796/251‑1 (MQ=255) gctgcttTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGACTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCTgaag < 2:420768/247‑1 (MQ=255) ttGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGAtt < 2:327524/177‑1 (MQ=255) aTGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCTTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTTGCGTGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTTATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATa < 1:517157/251‑1 (MQ=25) aTGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATa < 1:463549/251‑1 (MQ=255) aTGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATa < 2:214277/251‑1 (MQ=255) gtgAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTc < 1:392563/250‑1 (MQ=255) agaagTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCAc < 1:146516/251‑1 (MQ=255) ttttttGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGGTCACTCCCACAACCGCTAACT‑TTA‑GGGGTGGGGGATTAAGCCTGCTATGATTTAAAGTGCCGCTGAATTACTTTCACGCTAACTGGTCAGCACTTTTGGCCCCTATTTGTTAGACCCAAGAACTGGATACTTCGGCACgcaa > 1:63674/1‑247 (MQ=255) gacgacCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTAc < 1:108537/141‑1 (MQ=255) gACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGAGATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGtt < 2:556284/123‑1 (MQ=255) cccGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTAAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAAccc < 1:415268/251‑1 (MQ=255) aaaGCCTGCCCGTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCG‑AAATTCg < 1:346947/251‑1 (MQ=255) gTGGGCAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAGGAATTACTCTCACGATAACTGGTCa < 2:647227/154‑1 (MQ=21) cAGGCTTGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGGTCACTCCCCTAAACGCTAACT‑TAA‑AGGGTGTGGGATTAAGCCTGGTATGGTTTTACGTGGCGCTGGATTAATCTCTCGATAAATTGTCAGCAATTCTTGCCCATATTTGTAAACCCGAAGAACAGGATAATTCGGCACGCAATGCCGGGGCTCTAACCCCCCCCCGCGGAAATT‑GGGATGCTGCAAatctc > 1:162205/1‑250 (MQ=255) ggcttGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCG‑AAATTCGTGATGCTGCAACTCTGCt < 2:232317/247‑1 (MQ=255) cttGGGTAAAATTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGGTCAATCCCCTTAAAGCTAACT‑TAA‑GGGGTGTGGTATTTAGCCCGGTATTATTTTAAATGCCGGTGGAATAATCTCACGATAACTGGTCAGCAATTCTGGCCCATATTTGTAAGCCCCAAGGAATGGATACTTTGGCACGTAAAGCCGGGGCACTAACCCCCCCCCGCG‑AAATTTGTGATGCTGCGACACTGCttc > 1:665730/3‑249 (MQ=9) aaaatTAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCG‑AAATTCGTGATGCTGCAACTCTGCTACGTCTgg < 1:481169/250‑1 (MQ=255) attAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCG‑AAATTCGTGATGCTGCAACTCTGCTACGTCTGGggct < 1:93929/249‑1 (MQ=255) attAGGGTGCGTTGAAGATATGCGAGCACCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTGCGGCACGTAATGCCGGGGCTCTAGCCCGCCGCCGCG‑AAATTCGTGATGCTGCAACTCTGCTACGTCTGGggct < 1:40183/249‑1 (MQ=255) aaaGATATGCGAGCACGTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTAAGCCTGATATGAGTTAACTGGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTGCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCG‑AAATTCGTGATGCTGCAACTCTGCTTCGTCTGGTGCTGGCTTACGGcccc < 2:63674/250‑1 (MQ=14) atgtGCGAGCACCTGAAAAGTGGCGTGGATCACTCCCAAAAGCGCTATCT‑TAA‑GGGTTTTGGTATTGCGGCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAATCCCGAAGAACTGGATACTTGGGCACGTAAGGCCGGTGCTCTAACCCGCCGCCGCG‑AAAGTCGTGATGCGGCAACTCTGCTACGTCTGGGGCTTGCTTACGGCCCCgggg < 2:310970/248‑1 (MQ=14) atGCGAGCACCTGAAAAGTGGCGGGGTTCACTCCCATAAGCGCTAACT‑TAA‑GGGTGGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTATCCCGCCGCCGCG‑AAATTCGTGATGATGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCggggg < 2:140686/250‑1 (MQ=255) aGCACCTGAAAAGTGGCGGGGATCACTCCCATCAACGCTCACT‑TAA‑GGGGTGTGGGATTTCGCCTGATATGATTTTAAGGGCCGGTGAATTTATCTCACGATAAATGGGCCGCAATTCTGGCCCCTTTTTGTTAACCCCCAGAAATGGATACTTCGGCACGTAATGCCGGGGCTCTAAACCCCCCCCCCC‑AAATTCGTGGTGCTGCAACTCTGCTACCGCTGGGGCTGGCTTACGGCCCCcggggggtggg > 1:105210/1‑246 (MQ=9) gCACCTGAAAAGTGGCGGGGAGCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATACCTGGTCAGCAATTCTGGCACATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCAGCCGCG‑AAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACTGCCCCGGGGGGATGTCa < 2:276008/251‑1 (MQ=255) aCCTGAAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCG‑AAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCAtt < 1:492700/251‑1 (MQ=37) | ATTTGCTGTGCCGCGTTGTCGTCGAAACACCGGTAGGCCTGAACGAAAGGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACT‑TAA‑GGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCG‑AAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATT > NC_000913/15126‑15614 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |