New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)52 (0.860) 49/482 0.2 98.1% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4525972 = 1 (0.020)intergenic (‑169/+134) yjhI/sgcR putative DNA‑binding transcriptional regulator YjhI/putative DNA‑binding transcriptional regulator SgcR

ATAACTTGCCATACCAACCCATGCAATGTGGGTTAATATTTTTTCAGCACGGACTAATGAATTACACCCTTTGCGAACCATAATGGCTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCTGTGCAATAGTCTCAGGTAACCCGCTGTCACTGATGATCGTTTTAATACATGATAGTGT  >  NC_000913/4525723‑4526216
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    
cccaagctattcatggccatatcaaggattttctggtgagttccggtttgagaagcggtgtaagtgaactgcagtagccaggttttacggcggtgagagcagagatagcgctgatgtccggcggtgcgtttgcctttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcttcaccgg                                                                                                                                                                                                                                                     <  2:21074‑M2/2‑1 (MQ=255)
       cattcatggccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacgctaaatcagtaagttggcagcatcaccGGCGtgttg                                                                                                                                                                                                                                              <  1:154285‑M2/9‑1 (MQ=255)
          tcatggccagatcaaggattttctggtgcgtacctggttgagaagcggtgaaagtgaactgcggttgccatgttttacggcagtgatagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtatctgaacaggagggacagctgattgaaacagaagcctctggagcacctcaaaaacaccagcatacactaaatcagtaagttggcagcatcaccGGCGTgttgtt                                                                                                                                                                                                                                            <  2:158406‑M2/11‑1 (MQ=255)
           catggccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcattgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGc                                                                                                                                                                                                                                          <  1:134855‑M2/13‑1 (MQ=255)
                  atatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacaaacaccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCg                                                                                                                                                                                                                                   >  2:67735‑M2/232‑251 (MQ=255)
                      caatgattttctggtgcgtaccgggttgagaagctgtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgtacaggagggacagctgatagaaacagaagccactggggcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTTTTGCAACATCGTAgt                                                                                                                                                                                                                               >  2:200744‑M2/228‑251 (MQ=255)
                       aatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaactgaagccacaggagcacctcaaaaacaccatcatacactaaatcagaaagttggcagcatcaccGGCATGTTGTTGcaacatctaagtg                                                                                                                                                                                                                              >  2:64898‑M2/227‑245 (MQ=255)
                           attctctggtgcgtaccgggtggagaagcggggtaagtgacctgctgttgccagtttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAgtgtgt                                                                                                                                                                                                                           <  2:480070‑M2/28‑1 (MQ=255)
                                  aaTATTTTTTCAGCACGGACTAATGAATTACACCCTTTGCGAACCATAATGGCTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTgcg                                                                                                                                                                                                                   <  1:99678/251‑1 (MQ=255)
                                         accggtttgagaagctgtgtaattgaactgcagttgccatgttttacgtcagtgagagcagagatagcgctgatgtccggcggttcttttgccgttacgtaccacaccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaactccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTagag                                                                                                                                                                                                            <  2:394789‑M2/43‑1 (MQ=255)
                                          ccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGGGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGc                                                                                                                                                                                                           >  1:530019‑M2/208‑251 (MQ=255)
                                           cgggttgataagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGct                                                                                                                                                                                                          <  1:592828‑M2/45‑1 (MQ=255)
                                             ggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaaacagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGcttc                                                                                                                                                                                                        <  1:324444‑M2/47‑1 (MQ=255)
                                                   gaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTAtt                                                                                                                                                                                                  <  1:576845‑M2/53‑1 (MQ=255)
                                                    aagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggcgggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTTCAACATCGTAg                                                                                                                                                                                                                                >  1:511704‑M2/198‑220 (MQ=255)
                                                    aagcggtgtaagtgaacggcagttgccatgttttacggcagtgagagcagagatagcgcggatgtccggcggtgcttttgccgttacgcacccccccgtcagtagctgaacatgagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTGGTTGCAACATCGTAg                                                                                                                                                                                                                                <  2:511704‑M2/23‑1 (MQ=255)
                                                       cggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTAttcgtt                                                                                                                                                                                              <  1:67735‑M2/57‑1 (MQ=255)
                                                       cggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTAttcgtt                                                                                                                                                                                              <  1:172350‑M2/57‑1 (MQ=255)
                                                                 gaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATc                                                                                                                                                                                    <  1:41991‑M2/67‑1 (MQ=255)
                                                                 gaactgcagttgccatgttgtacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcgcctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATc                                                                                                                                                                                    <  1:368107‑M2/67‑1 (MQ=255)
                                                                      gcagttgccatgttttacggcagtgagagcagagatagtgcttatggccggcggtgcttttgccgttccgcaccaccccgtcagtagctgaacaggaggtacagctgatagaaacagaagccactggagcacctcaaaaacaccatcattcactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATAGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCa                                                                                                                                                                                <  1:679526‑M2/71‑1 (MQ=255)
                                                                           tgccatgttttacggcagtgagagcagagaaagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctggtagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGACTCGCGCTTCTTTAATCGTTCGAGCGCCACGCCAATAttt                                                                                                                                                                          >  2:66645‑M2/175‑251 (MQ=255)
                                                                                ggttttacggcagtgagagcagggatagcgcggatgtccggcggggcttttgcctttactctccgccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATACGTTCGAGCGCATCGCCAATATTTTCTa                                                                                                                                                                      <  2:414007‑M2/81‑1 (MQ=255)
                                                                                 gtttgacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCTTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTAtt                                                                                                                                                                    <  1:204896‑M2/83‑1 (MQ=255)
                                                                                  ttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaacccgtcagtagctgaaccggggggacagctggtagaaacagcagccactggcgcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGCGTTGTTGCAACATCGTAATGGGTGGATTGCGGCTAGAGCTTCTTTATTCGTTCGAACGCATCGCCACTTTTTTTTATTg                                                                                                                                                                   >  2:206398‑M2/168‑251 (MQ=255)
                                                                                       cggtagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccacgggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGc                                                                                                                                                              <  1:100835‑M2/89‑1 (MQ=255)
                                                                                           agtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCAtt                                                                                                                                                          <  1:463333‑M2/93‑1 (MQ=255)
                                                                                                      agatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagcgactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTg                                                                                                                                               <  1:500560‑M2/104‑1 (MQ=255)
                                                                                                              ctgatgtccggcggagcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATAGCCAATATTTTCTTTTGGGTGCCTTTGTTTATTTTTGCTTGAAAt                                                                                                                                       >  2:92092‑M2/140‑251 (MQ=255)
                                                                                                                 atgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaccagaagccactggagcacctcaaaaacaccatcataaactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTCGAGcttct                                                                                                                                                                                                       >  1:440003‑M2/137‑184 (MQ=255)
                                                                                                                 aggtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGcttct                                                                                                                                                                                                       <  2:440003‑M2/48‑1 (MQ=255)
                                                                                                                   gtccggcggtgcttgtgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCct                                                                                                                                   <  1:92092‑M2/116‑1 (MQ=255)
                                                                                                                     ccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcaccgcaaaaacaccatcatacactaaagcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCtctc                                                                                                                                <  1:466963‑M2/119‑1 (MQ=255)
                                                                                                                      cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagcttatagaaacagaagccactggagcacctcaaaaacaccatcatactctaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCg                                                                                                                               <  1:353003‑M2/120‑1 (MQ=255)
                                                                                                                                      gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATc                                                                                                               >  1:376513‑M2/116‑251 (MQ=255)
                                                                                                                                            caccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTa                                                                                                         <  1:331989‑M2/142‑1 (MQ=255)
                                                                                                                                                       cagtagctgaacaggcgggccagctgatagacacagaagccacaggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatccccGGCGTGTTGTTGCCACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCCTCGCCCATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTAAATGaggg                                                                                              >  2:95094‑M2/99‑250 (MQ=255)
                                                                                                                                                       cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGt                                                                                              <  1:579007‑M2/153‑1 (MQ=255)
                                                                                                                                                              gtaacatgagtgacagctgatagaaacagaagccactggatcacctctaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGTGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCTTTCGAGCTCATCTCCAATAATTTCTTTTGGGTGTCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTAGCTCTTTATTGAATGAGGTCAAaaca                                                                                       <  2:649628‑M2/160‑1 (MQ=255)
                                                                                                                                                                   cggagggacagctaataagaacagaatccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTAGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGTGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTGCTGATCACTTTATTGAATGAGGTAAAAACAACTGa                                                                                  <  2:117104‑M2/165‑1 (MQ=255)
                                                                                                                                                                    ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcattcactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTTGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGAc                                                                                 <  1:126764‑M2/166‑1 (MQ=255)
                                                                                                                                                                    ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTATATTGAATGAGGTAAAAACAACTGAc                                                                                 <  1:316968‑M2/166‑1 (MQ=255)
                                                                                                                                                                     gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGAc                                                                                 >  1:398303‑M2/85‑250 (MQ=255)
                                                                                                                                                                        ggacagctgatagaaacagaagccactggcgcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCg                                                                                                                                                                                   >  2:297367‑M2/82‑149 (MQ=255)
                                                                                                                                                                        ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTTGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCg                                                                                                                                                                                   <  1:297367‑M2/68‑1 (MQ=255)
                                                                                                                                                                                    gaaacagaagccactggagcagcccaaaaacccgatcatgcactaaatcagtaagttggcagcatcaccGGCGTGTTGGTGCAACATCGGAGGGTGTGGATTGCGACTAGAGATTCTGTATTCGTTAGAGCGCATCGCCAATATTTTCTAGTGGGTGCCATTGATTATTTTTGATTGAAATCCCTCTCGAATGAACTTGCTAAACACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATa                                                                 <  1:118196‑M2/182‑1 (MQ=255)
                                                                                                                                                                                        cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGACTGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGc                                                             >  1:527087‑M2/66‑251 (MQ=255)
                                                                                                                                                                                                                        catacactaaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCTGTGCAATAGTCTCAGGTAACCCGCTGTCACt                             >  1:525434‑M2/34‑251 (MQ=255)
                                                                                                                                                                                                                               taaatcagtaagttggcagcatcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCTGTGCAATAGTCTCAGGTAACCCGCTGTCACTGATGATc                      >  1:610866‑M2/27‑251 (MQ=255)
                                                                                                                                                                                                                                            tggcaggatcaccGGCTGGTTGGTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATGCGTGCGAGCGCAGCGCCAATATTTTCTATTGGGTGCCAt                                                                                                                                                           <  2:261837‑M2/92‑1 (MQ=255)
                                                                                                                                                                                                                                            tggcagcatcaccGGCGTATTGTTGCAAAATCGTAGCGTGTGCATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCAt                                                                                                                                                           >  1:261837‑M2/14‑105 (MQ=255)
                                                                                                                                                                                                                                                   atcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCTGTGCAATAGTCTCAGGTAACCCGCTGTCACTGATGATCGTTTTAATACATGATAgtgt  >  1:205437‑M2/7‑251 (MQ=255)
                                                                                                                                                                                                                                                   atcaccGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCTGTGCAATAGTCTCAGGTAACCCGCTGTCACTGATGATCGTTTTAATACATGATAgtgt  <  1:121053‑M2/245‑1 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    
ATAACTTGCCATACCAACCCATGCAATGTGGGTTAATATTTTTTCAGCACGGACTAATGAATTACACCCTTTGCGAACCATAATGGCTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAATAAAAAGTAGATGGCGTGTTGTTGCAACATCGTAGTGTGTGGATTGCGCCTAGAGCTTCTTTATTCGTTCGAGCGCATCGCCAATATTTTCTATTGGGTGCCATTGATTATTTTTGCTTGAAATCCCTCTCGAATGAACTTACTTATCACTTTATTGAATGAGGTAAAAACAACTGACATCCGGCTCGCTGATAACGCTGTGCAATAGTCTCAGGTAACCCGCTGTCACTGATGATCGTTTTAATACATGATAGTGT  >  NC_000913/4525723‑4526216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.