New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2170171 =	NA (NA)	33 (0.770) +CAACACTTTAAAATGCCCTATATAGGGTTAACCAGTAATTATCTGTATGATAGCTTTGAGTTCGGGAGGA	26/342	0.5	NA	noncoding (1/1258 nt)	IS3	repeat region
	?	NC_000913	= 4519239	NA (NA)					noncoding (768/768 nt)	IS1	repeat region

GCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGC  >  NC_000913/4518994‑4519488                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                          gccttggagtccgtggtatagatTACGGATGGCTGGCCGCTGGATTAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCGCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctc                                                                                                                                                                                                                                                      >  2:289915‑M2/12‑246 (MQ=255)                     gATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACGCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcata                                                                                                                                                                                                                                  >  2:478403‑M2/1‑226 (MQ=255)                               ggtttgccgctgTTTGAAGCACGCCTGAAGGGAAAGCTGCAAGTTATCAGTAAGAGTTCCCCTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataatt                                                                                                                                                                                                                         >  2:275894‑M2/6‑216 (MQ=255)                                   ggcCGCTGTATGAATCACGCCTGAAGGGAAAGCTTCACGTTATCAGCAAGCGTTACACTCAACGCATTGAGCGACATACTCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGGCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCATGAAGTTAGCGTCCTTACCtcctaccgaactcaaagctatcatacatataattactgg                                                                                                                                                                                                                    <  2:475310‑M2/251‑40 (MQ=255)                                   ggcCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattact                                                                                                                                                                                                                      >  1:606624‑M2/1‑212 (MQ=255)                                    tccgCTGTATGAATCACGCCTGACGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGAAAGTTTGAGTCATTACCtcctcccgaactcaaagctatcataccgttaattacaggt                                                                                                                                                                                                                   <  2:290765‑M2/250‑41 (MQ=255)                                    gcCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggt                                                                                                                                                                                                                   >  1:9571‑M2/1‑211 (MQ=255)                                            aTGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccct                                                                                                                                                                                                            <  2:134071‑M2/250‑48 (MQ=255)                                                   aCGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatataggg                                                                                                                                                                                                    >  1:360953‑M2/1‑196 (MQ=255)                                                          aaGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtc                                                                                                                                                                                                                                                         >  2:316214‑M2/1‑189 (MQ=255)                                                          aaGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtc                                                                                                                                                                                                                                                         <  1:316214‑M2/191‑3 (MQ=255)                                                            aggaAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATGGAGCGACATAATCTGAAGCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTAGCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaa                                                                                                                                                                                           >  1:442083‑M2/2‑187 (MQ=255)                                                             ggAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaag                                                                                                                                                                                          >  1:144425‑M2/1‑186 (MQ=255)                                                                aaGCTGCACGTTATCATCAAGCGTTACACGCAGCGCATTGAGCGGCATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAATGTCATCGGGCATTATCTGAACATAAAACCCTATCAGTAAGTTTGAGTCATTACCtccttccgaactcaaagctatcatacagataattactggttaaccctatataggatattttaaagtgt                                                                                                                                                                                       >  2:134061‑M2/1‑183 (MQ=255)                                                                      cACGTTACTAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTTAGACAACATCTGGCAAGGCTGGGACTGAAGTTACTGTCGTTCTCAAAAGCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGATCATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattacgggtgaaccctatatagggcattttaaagtgttgtgat                                                                                                                                                                                 >  2:479800‑M2/1‑177 (MQ=255)                                                                       acgttcttagacagcgttaccctcaTCGCAGTTAGCGACATAATCTGTATCTGAGACAACCTCTGGCAAGGCTGGGACGGAAGTTATTGTCGTTCTCAAAATCTGTGGAGTTGCATTACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaatctatcatacagataattactggttagccctatatagggcattttaaagtgttgtgagc                                                                                                                                                                                >  2:183760‑M2/13‑176 (MQ=255)                                                                                gCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAACCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagc                                                                                                                                                                       >  2:131669‑M2/1‑167 (MQ=255)                                                                                   aGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaat                                                                                                                                                                    <  2:533542‑M2/251‑88 (MQ=255)                                                                                     cGTTACACTCAGCGCATTGAGCGACATCATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGGTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAATGTCATCGGGCATTATCTGAACATAAAGCACTATCAGTAAGTTGGTGTCATTACCtcctcccgaactcaaagctatcatacagataagtactggtgaactctatatagggcagttttaagtgttgtgatcttacccagcaatag                                                                                                                                                                  >  2:460297‑M2/1‑162 (MQ=255)                                                                                         acacTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggc                                                                                                                                                              <  1:508185‑M2/251‑94 (MQ=255)                                                                                                gcgcATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGGCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgacctcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgtggtgatcttacccagcaatagtggacacgcgg                                                                                                                                                       >  2:193502‑M2/1‑151 (MQ=255)                                                                                                        aGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtg                                                                                                                                                <  1:603332‑M2/250‑108 (MQ=255)                                                                                                         gCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgag                                                                                                                                              >  1:342332‑M2/1‑142 (MQ=255)                                                                                                           gACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCTGTGGGGTAGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccatatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagt                                                                                                                                             <  2:375256‑M2/250‑111 (MQ=255)                                                                                                               tAATCTAAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCAGGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttacagtgttgtgatcttacccagcaatagtggaaacgcggctaagtgagtaaact                                                                                                                                        <  2:533112‑M2/251‑116 (MQ=255)                                                                                                                     gaatctgaGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca                                                                                                                                    >  1:603351‑M2/1‑130 (MQ=255)                                                                                                                           gagaCAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCTTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtca                                                                                                                                >  2:35611‑M2/1‑124 (MQ=255)                                                                                                                           gagaCAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggca                                                                                                                                                                                                  <  1:482745‑M2/181‑58 (MQ=255)                                                                                                                           gagaCAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggca                                                                                                                                                                                                  >  2:482745‑M2/1‑124 (MQ=255)                                                                                                                             gccaacatcTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagatacttactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagagg                                                                                                                            <  2:509273‑M2/247‑128 (MQ=255)                                                                                                                              acaacaTCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagcta                                                                                                                                                                                                                                       >  2:113825‑M2/1‑121 (MQ=255)                                                                                                                              acaacaTCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagcta                                                                                                                                                                                                                                       <  1:113825‑M2/141‑21 (MQ=255)                                                                                                                               caacaTCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgac                                                                                                                        >  1:406999‑M2/1‑120 (MQ=255)                                                                                                                                aacaTCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagata                                                                                                                                                                                                                            <  2:417952‑M2/150‑32 (MQ=255)                                                                                                                                aacaTCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagata                                                                                                                                                                                                                            >  1:417952‑M2/1‑119 (MQ=255)                                                                                                                                   aTCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac                                                                                                                    <  1:32845‑M2/251‑136 (MQ=255)                                                                                                                                               tGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaac                                                                                                          <  1:613872‑M2/249‑146 (MQ=255)                                                                                                                                                gggACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaaca                                                                                                         >  1:225790‑M2/1‑103 (MQ=255)                                                                                                                                                   aCGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcccaagacaaaaaagtttc                                                                                                    <  1:678838‑M2/251‑152 (MQ=255)                                                                                                                                                   aCGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctaacatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaattgagtaaactctcagtcagaggtgactcacaagacaaaacagtttc                                                                                                    >  1:519743‑M2/1‑100 (MQ=255)                                                                                                                                                      gAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgaggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacattttca                                                                                                   >  1:426249‑M2/1‑97 (MQ=255)                                                                                                                                                      gAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccaacaatagtggacacgcggctaagtgagtaaactctcag                                                                                                                                   >  2:663642‑M2/1‑97 (MQ=255)                                                                                                                                                      gAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccaacaatagtggacacgcggctaagtgagtaaactctcag                                                                                                                                   <  1:663642‑M2/217‑121 (MQ=255)                                                                                                                                                       aaGTTACTGTCGTTCTCAAAATCGGTTGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaacccgatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaacc                                                                                                >  2:158286‑M2/1‑96 (MQ=255)                                                                                                                                                           tACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagt                                                                                             >  1:509273‑M2/1‑92 (MQ=255)                                                                                                                                                                 cGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacc                                                                                                                                                                           <  2:126866‑M2/166‑81 (MQ=255)                                                                                                                                                                 cGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacc                                                                                                                                                                           >  1:126866‑M2/1‑86 (MQ=255)                                                                                                                                                                   ttCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCGTACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCGTCAAAAATCAGGTCCGTGACat                                                                                     >  2:129889/1‑250 (MQ=255)                                                                                                                                                                        aaaaTCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgcctcacaagacaaaacagtttcaaccagtaaaaaaacgtaaa                                                                                >  1:290765‑M2/1‑79 (MQ=255)                                                                                                                                                                             cGGTGGAGTTGCATGACAAGGTCATCGGGTATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTCCCtcctccagaactcaaagctatcatacagataattactggttaaccctatatagggcattttatagtgttgtgatcttacccagcaatagtggacacgcggataagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtatacaccat                                                                          >  2:363876‑M2/1‑74 (MQ=255)                                                                                                                                                                                           gACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcatccagtaaaaaatcgtaaacaccattcgcatgaatttcg                                                            >  1:201207‑M2/1‑60 (MQ=255)                                                                                                                                                                                                              aTCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagctt                                         <  1:171938‑M2/251‑211 (MQ=255)                                                                                                                                                                                                                                                   tACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagcttgcagaatgcatcggtgttactgccggagtccgtgaac    <  1:437503‑M2/251‑248 (MQ=255)                                                                                                                                                                                                                                                      ctcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagccaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagcttgcagaatgcatcggtgttactgccggagtccgtgaactt  <  2:143740‑M2/250‑250 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                          GCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGC  >  NC_000913/4518994‑4519488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.