| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,411,925 | Δ23,060 bp | [ttcA]–ynaM | 34 genes [ttcA], intR, xisR, rcbA, ralA, ralR, recT, recE, racC, ydaE, kilR, kilS, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzoR, trkG, ynaK, ydaY, ynaA, lomR, insH5, lomR, stfR, tfaR, pinR, ynaE, ynaM |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1411925 | 1434984 | 23060 | 44 [3] | [1] 42 | [ttcA]–ynaM | [ttcA],intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,kilS,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH5,lomR,stfR,tfaR,pinR,ynaE,ynaM |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1411924 | 3 (0.050) | 41 (0.760) | 38/430 | 0.4 | 96.8% | coding (25/936 nt) | ttcA | tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| ? | NC_000913 | 1434985 = | 0 (0.000) | intergenic (‑579/+200) | ynaM/uspF | protein YnaM/universal stress protein F | |||||
GTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGG‑AAAATGTCAGCACATTTGCGAAATGAAT‑CAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACG > NC_000913/1434741‑1435220 | gcagaacgtgttccgggaagcccggttgcttttgatcgaggttaacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAAtt < 1:522684‑M2/7‑1 (MQ=255) cagaacgtgttccgggaagcccggttgcttttgatcgaggttaacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAAttt > 1:135682‑M2/244‑251 (MQ=255) agatcgggtgccgggaagcccggttgcttttgatcgatgttaacagccaccagcgaaaaaatgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgcctacttcaatcatattgaagtcagcaatgtcttcgtccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcgtACTAATTTc < 2:649881‑M2/9‑1 (MQ=255) acgtgttccgggaagcccggttgcttttgatcgaggttaacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTg < 1:198862‑M2/12‑1 (MQ=255) gtgccgggaagcccggttgcttttgatcgaggttaacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaagggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGAttt < 2:390272‑M2/16‑1 (MQ=255) gtaccggtaagcacgggtgcttatgatcgaggttaacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGAtt < 2:182862‑M2/15‑1 (MQ=255) tttgatcgaggttaacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACt < 1:446315‑M2/36‑1 (MQ=255) cgaggttaacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcctattgaagtcagcaatggcttcgcccacgttacgaagccgacgtttttgtaatttattcaggttgtattggtctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCaatttg > 2:329322‑M2/209‑249 (MQ=255) cgaggttaacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTc < 1:156265‑M2/42‑1 (MQ=255) cgaggttaacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaagctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTGCTGGATTTTGCGTCATTTAAAAGCGACTCAATTCg < 2:413‑M2/43‑1 (MQ=255) aacagccaccagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTatat < 2:577344‑M2/49‑1 (MQ=255) ggtcatcagcgaaaaattgtttggctcgctttgctgccatttgcgcagaacctccagcatggtatatctttctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcatgttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACCCAATTCGTTATTTGGCa < 2:581583‑M2/53‑1 (MQ=255) agccacaagcgaaaaattgattggcgcgatttgctgcaaattgcgcagaatctccagaatggaatagctgtctttaccaccggagaggaaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgccaacgttacgacgaagacgattttgtaatttgttcaggttgtattgttctttctaACTAATTTCTTGATTTTACGACCTTTAAAAGCGACTCATTTCGTTATCTGgcc > 2:655229‑M2/199‑250 (MQ=255) gccactagcgaaaaattgattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtcttgacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcatcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgtgcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTGATATGGCAt < 2:620050‑M2/54‑1 (MQ=255) gattggcgcgctttgctgcaaattgcgcagaatctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGGCATTTAAAAGCGACTCAATGCGTTATATGGCATCAGAAGAGTATGCGTCa < 1:529868‑M2/71‑1 (MQ=255) atttgtgctctttgctgcaaattgctcagaatctccatcatggtatagctgtctttaccctcggagaagcaaaccatgatgcgatctccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttTCTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTTTGCGTCAt < 2:242433‑M2/72‑1 (MQ=255) gttttgctgcaaattgcgcagaatctccagaatggtatagctgtctttacccccggagaggcaaaccctgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACGCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAAc < 2:316274‑M2/80‑1 (MQ=255) cgaattgcgcagaatctccagcatggaatagctgtctttacccccggagaggcaaaccatgatgcggtcgccttcttcagtcatattgatgtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgtgcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCAt > 1:81892‑M2/163‑251 (MQ=255) atcttcagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGAcag < 2:23456‑M2/24‑2 (MQ=255) atctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACAt > 1:23456‑M2/150‑173 (MQ=255) atctccagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGat > 1:407961‑M2/150‑250 (MQ=255) cagcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgcctgcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATaaaa < 2:135682‑M2/107‑1 (MQ=255) cagcatggtatagctgtctttacccccggagaagccaaccatgatgagatcgccttcttccatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgttgttgtagtttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCTACATTTAAAAGCGACTAAATTCGTTATATGGCATCACAAGAGTATGCGTCATGCCGGAACGCCCAGCATAATAAATCTGATATaaa > 2:252099‑M2/145‑250 (MQ=255) agcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtata > 2:72243‑M2/144‑191 (MQ=255) agcatggtatagctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtata < 1:72243‑M2/48‑1 (MQ=255) attgacggcttttcccccggaatggcgaaccaggatgcgatcgccttcttcaaacatattgaagtcagcaatggcttcgcccacggtacgacgcatatgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCAGGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTgg < 2:460317‑M2/115‑1 (MQ=255) gctgtctttacccccggagaggcaaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCgtg < 1:543346‑M2/119‑1 (MQ=255) ttacccccggagaggcaatccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgccctcgttacgacgcagacgtttttgtaatttgttcaggttgtttttttctttcttACTAATTTCTTGATTTTGCGACAATTAAAAGCGACCCAAGTCGTTATATGGCAGCAGAATAGTATGCGTCAGGCCGGAATGCGCAGCATAAGAAATCTGATATAAAAAAGTGTGGCGTGTATg < 2:350851‑M2/123‑1 (MQ=255) aaaccatgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGG‑aaa < 1:512168‑M2/142‑1 (MQ=255) catgatgcgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGG‑AAAATGt < 1:415780‑M2/146‑1 (MQ=255) cgatcgccttcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGGATGGTACGGATTAAAGGGGTAAAATG‑CAGcac > 1:467473‑M2/99‑250 (MQ=255) aatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGG‑AAAATGTCAGCACATTTGCGAAATGaa > 1:372591‑M2/85‑250 (MQ=255) aatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGG‑AAAATGTCAGCACATTTGCGAAATGAAt < 1:501256‑M2/167‑1 (MQ=255) tattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTTGAGGGG‑AAAAATTAAGCACCTTTGCGAAATGaat‑ccaa > 2:168126‑M2/80‑247 (MQ=255) aatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGG‑GAAATGTCAGCACATTTGGGAAATGAAT‑CAAAAAACCCCCAGCaa > 1:82332‑M2/67‑250 (MQ=255) tcgccctcgtttcgacgcagactggtttgtaagttgttcaggttgtattgttttttcttACTAATTTCGTGATTTTGCGACATTTAAAAGCGACTGAATTCGTTATATGGCATCAGAAGAGTAAGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATGAGAGGGA‑AAAAGGTCAGCACATTTGCGAAATGAAT‑CAAAAAGCCCTCTGCAATGTTCgg < 2:177053‑M2/191‑1 (MQ=255) tcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAACAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGCAATCTGATATAAAAAACTGTGGCGTGTATGGTAAGGGTTCGAGGGG‑ACAATGTCAACACATTTGCGAAATGAAA‑AAAAAAGACCGCAGCAATGTGCggg > 2:623371‑M2/60‑251 (MQ=255) ccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGGTTAGAGGGG‑AAAATGTCAGCACATTTGCGAAATGAAT‑CAAAAAACCCGCAGCAATGTGCGGGCGtt > 1:657273‑M2/56‑251 (MQ=255) cgttactacgcagtcgtttttgtaattttttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACACAACTCGGTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAAGCTGATATAAAAAACTGTGGCGTGTATGGTACTGATTAGAGGGG‑AAAATGTCAGCACATTTGCGAAATGAAT‑CAAAATGCCCGCAGCAATGTGCGGGCGTTAgt < 2:585591‑M2/199‑1 (MQ=255) tttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGG‑AAAATGTCAGCACATTTTCGACATGAAT‑CAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACaacccg > 1:276342‑M2/37‑249 (MQ=255) ttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGGACGGTACGGATTAGAGGGG‑AAAATGTCAGAACATTTGCGAAAT‑AATACAAAAAGCCCGGAGCAAAGTGCGGACGTTAATATCAGCgcacaaacaa > 2:353526‑M2/36‑246 (MQ=255) gTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTAAGGATTAGAGGGG‑AAAATGTCAGCACATTTGCGAAATGAAT‑CAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGACCTCTGCGTGACg > 1:664327/1‑251 (MQ=255) | GTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGG‑AAAATGTCAGCACATTTGCGAAATGAAT‑CAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACG > NC_000913/1434741‑1435220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |