Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,235,323	IS2 (+) +5 bp	coding (386‑390/720 nt)	fadR →	DNA‑binding transcriptional dual regulator FadR

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1235323 =	1 (0.020)	61 (1.010)	58/482	0.1	98.4%	coding (386/720 nt)	fadR	DNA‑binding transcriptional dual regulator FadR
	?	NC_000913	1467910 =	NA (NA)					noncoding (1331/1331 nt)	IS2	repeat region
*	?	NC_000913	= 1235327	1 (0.020)	50 (0.830)	46/482	0.3	98.0%	coding (390/720 nt)	fadR	DNA‑binding transcriptional dual regulator FadR
	?	NC_000913	= 1469240	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region

TTGCTTACGCCAGAGAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGGG  >  NC_000913/1468994‑1469484                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     ttGCTTACGCCAGAGAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAAcc                                                                                                                                                                                                                                                  >  1:269388/1‑251 (MQ=11)        cgccaacgcaaTAACTGGATGGCTGCTACACCATGTTGCCGGGCCACGCGGGAGACAGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGGACGCCGTCTGAGTTTATCCGGCCCTAAGACATCAATCATCTGTTCTCAAATGACTAGTCTAAAAACTAGAATTAAGACTATCACTTATTTAAG‑GATTATTTGTTGTCTGACGTTTCATGGGGCCAGTGTAAACCCCAAAac                                                                                                                                                                                                                                           >  2:638768/10‑251 (MQ=11)          ccAGAGAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTACGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGGGAT‑ATTGGTTGTCTGGAGATTCAGGAGGCCAGTCTAAACCCCAGAactt                                                                                                                                                                                                                                         >  1:448383/1‑251 (MQ=18)                 aaTAACTGGCTGGCTGCTCAACCATGTTGCCGGGCATCGAGGGAGACCGTTATTCCCGGTTTAAAGCTCTGCTGTACAATTGCGATCTTTTCCTGTTTTGTACTCTGTCTGCGTTTCTTCGGCCCTAACACATCAATCATCTGTTCGCCAATGACTAGTTTAAAAACTAGTATTAAGACTATCGCGTATTTAGGTGAG‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCAAGAACCTACTTATg                                                                                                                                                                                                                                  <  2:544505/251‑1 (MQ=11)                     aCTGGCAGGCTGCTACACCATGTTACCGGGCAACGAGGGAGACCGTCATCCCCGGCTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGAACGCCGTCTGCGTTTCTCCGGCCCTAAGCCATCAATCATCTGTTATCCAATGCATAGTCTAAAAACTAGTATTAAGACTATCACTTATTTCAGTGAT‑ATTGGTTGTCTGGATTTTCAGGGGGCCAGTCTAAACCCCAGACCATACTTATGCTg                                                                                                                                                                                                                               >  2:640100/1‑250 (MQ=11)                            ggctgCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGACCAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGACAGTCTAAACCCCAGAACTTACTTATGCTGATTCCggg                                                                                                                                                                                                                       >  2:42762/1‑250 (MQ=255)                             gctgctACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTg                                                                                                                                                                                                                      <  2:7399/251‑1 (MQ=255)                              ctgctACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGc                                                                                                                                                                                                                     >  1:621207/1‑251 (MQ=255)                                     cccATTTTGCCGGGTAACGAGGGAGACCTTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGAACTTGTCCTTTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGTCTAGTCTTAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATCCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAAtt                                                                                                                                                                                                              <  2:487585/250‑1 (MQ=14)                                                    aaCGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACt                                                                                                                                                                                               >  1:393813/1‑251 (MQ=255)                                                     aCGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTTAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGTTACtt                                                                                                                                                                                              <  2:30006/251‑1 (MQ=255)                                                      cgtggtagaCCGTCACTCCCTGTACAAAGCCCTGCTTAACAATTGCTATCTTTTCCTGTTTGGTACGCCGTTTGCGTTTCTCCTGCCCTAAGATATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACGAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGTGGTCAGTCTAAACCACAGAACTTACTTATGCTAATTCCTGTGCGAAAATTGCTAATAAAGGTACTTg                                                                                                                                                                                             <  2:568792/245‑1 (MQ=14)                                                         gggAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAA‑GGTACTTGt                                                                                                                                                                                            >  1:109629/1‑248 (MQ=255)                                                                        ccGGTTCAAAGCTCCGCTTAACAACTGCGATCTGTTCCTGGGTGGTACGCCCACTGCGTTTCTCAGACCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAACACTTACTATTAAGTCTACCACTTATTTAAGTGAT‑ATTGGTTGTCTGGTGATTCAGGGGGCCAGTCTAATCCACAGAACTTACTTATGCTGATTCCGGTGCGAAAATTTTTCATAAAGGTACTTTTAGATTCAATTGGTCAAc                                                                                                                                                                           <  2:475164/251‑1 (MQ=17)                                                                          gggtCAAAGCTCTGCTTAACAATTGCGATCTTTTCCTTTGTGTTTCGCCGTCTGCGTTTCTCCGAACCTAAGACAACAATCATCTGTTCTTCAATTACTAGTCTAAAAACTAATATTAAGACTATCACTTAATTAAGTGAT‑ATTGGTTGTCGCGAGATTCAGGGGGACAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAA‑GGTACTTGTAGATTCAATTGGTTAACGCa                                                                                                                                                                        <  2:109629/248‑1 (MQ=255)                                                                                                  gCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGCCTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACACCAAAACTTACTTATGCTGATTCCGGTGCGAACATTGTTAATAAAGGCACTTATAGATTCAATTGGTCAACGCAACAGTTATGTTAAAACATGGGGt                                                                                                                                                 >  2:448444/1‑251 (MQ=18)                                                                                                  gCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGt                                                                                                                                                 >  1:486196/1‑251 (MQ=255)                                                                                                      tCTTTTCCTGTGTGTTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGAGGGCCAGTCTAAACCCCAGAACTTACATATGCTGATTCCGATGCGCAAATTGTTAATAAAGGAACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATgggtatgcg                                                                                                                                             >  2:24072/1‑245 (MQ=21)                                                                                                         tttCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTg                                                                                                                                               <  1:27077/246‑1 (MQ=255)                                                                                                            ccTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGt                                                                                                                                        <  2:644163/250‑1 (MQ=255)                                                                                                                               gCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAAc                                                                                                                      <  1:613502/249‑1 (MQ=255)                                                                                                                                 gTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACAttt                                                                                                                  >  1:596436/1‑251 (MQ=255)                                                                                                                                            ccTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAATTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCAGTGCGAAAATTGTTATTAAAGGTACTTGTAGATTCa                                                                                                                                                                                     >  2:597818/1‑173 (MQ=255)                                                                                                                                            ccTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCa                                                                                                                                                                                     <  1:597818/173‑1 (MQ=255)                                                                                                                                                   cATCAATCATCTGTTCGCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGTCGAACATTTACAGCAGAGGAAAAAGcc                                                                                                <  1:257531/251‑1 (MQ=255)                                                                                                                                                        atcatcTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGt                                                                                           >  1:6473/1‑251 (MQ=255)                                                                                                                                                               gtgttcCAATGAATAGTCTACAAAATAGTAGTAAGCCTATCACTTAATTAAGTGAT‑ATTGGTTGTCTGGTGATTCAGGGTGCCAGTCTAAACCCCAGACCTTGCTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTTAACGCAACAGTTATGTGAAAACATGGGGTGGCGTAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGTAAAAAGCCTCTGTTTTTg                                                                                      <  2:124396/245‑1 (MQ=25)                                                                                                                                                                     cAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATgg                                                                              >  2:68204/1‑251 (MQ=255)                                                                                                                                                                             aGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAAc                                                                        <  1:650482/249‑1 (MQ=255)                                                                                                                                                                                      aCTAGTATTAAGACTATCACTTAGTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACGTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACGTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCtt                                                             <  2:15831/251‑1 (MQ=255)                                                                                                                                                                                         aGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGAGGGCCAATCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAAAGGAACAGGCTTc                                                            >  1:444324/1‑249 (MQ=255)                                                                                                                                                                                              tAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAACGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGaa                                                      >  1:633863/1‑250 (MQ=255)                                                                                                                                                                                               aaGACTGTCACTTATTTAAGTGAG‑ATTGTGTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATGGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACTCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGTAAAAAGCCTCTGTTTTTGAACTAGGGAAGAACGGAACAGGCTTCAGTGAAAt                                                    <  2:219798/251‑1 (MQ=21)                                                                                                                                                                                                           tATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCt                                        >  2:39346/1‑251 (MQ=255)                                                                                                                                                                                                            aTTTAAGTGAT‑ATTGGTTGACTGGAGAGTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAATGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCt                                        <  2:175631/250‑1 (MQ=255)                                                                                                                                                                                                                          tGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAAATTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAAccc                           <  1:287480/250‑1 (MQ=255)                                                                                                                                                                                                                           gggtGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCgg                         <  2:257225/248‑1 (MQ=255)                                                                                                                                                                                                                            gTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGa                        <  1:386690/251‑1 (MQ=255)                                                                                                                                                                                                                               gTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAAATATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACg                     >  1:99276/1‑251 (MQ=255)                                                                                                                                                                                                                                                 ccAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCGCTATGTTAAgg   <  2:486196/251‑1 (MQ=255)                                                                                                                                                                                                                                                 ccAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGACTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAgg   >  1:244449/1‑251 (MQ=255)                                                                                                                                                                                                                                                  cAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAggg  <  1:262090/251‑1 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     TTGCTTACGCCAGAGAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAT‑ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGGG  >  NC_000913/1468994‑1469484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.