New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1207790 =	34 (0.560)	26 (0.460)	23/450	1.2	49.6%	coding (290/630 nt)	ycfK	protein StfP
	?	NC_000913	1209619 =	21 (0.370)					intergenic (‑500/‑66)	tfaE/pinE	putative tail fiber assembly protein TfaE/site‑specific DNA recombinase

CCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGA  >  NC_000913/1209370‑1209868                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                          cctaccgtgcaacccccTGAAGACTTAAAATAGATCGACCTGTTGAAATCCCCCCCCCGTCAACCCAGCCTCAAAGACACTCACCACGTAAATCAGTCAAGTTAGTGGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTGCATCAGAACAATCGGCACCATTGCATTTCAGCCAGCCTGTTGGTGGAGGTGCTGAAGGCCACGGAACCGGGACTCCAACAGGTAATGCAGAGCCTTCGCccaacccaac                                                                                                                                                                                                                                                           <  2:236672/237‑1 (MQ=255)            tACCCCTGAAGACTTAAAATATAGCGACCTGTATCACTCCCCTGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGAGGCACCATTGCATTTCAGCCAGCCTGTTGGCGAAGTAGCTGAAGGCCACGGAAACGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGATTATGAAAAt                                                                                                                                                                                                                                               >  2:645400/1‑251 (MQ=255)             aCCCCTGAATAATTACAATAGAGCGACATGTATCAATCCCCCGCCCGTCATTCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCCGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGCACCGGGACACCAACAGGCAATGCAGAGCCTTCTCCCAAACCAACGtttttacaaat                                                                                                                                                                                                                                               >  2:89704/1‑242 (MQ=255)                 cTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCACAGCAACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTCTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGATTGGCTGAAGGCCCCGGAACAGGGACACCAACAGCTCACGCAGAGCCTTCTCCCAAACCAACGATTCTGAAAATga                                                                                                                                                                                                                                             >  2:196694/1‑248 (MQ=255)                          tAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACa                                                                                                                                                                                                                                   <  1:653406/249‑1 (MQ=255)                            tgtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGc                                                                                                                                                                                                                                <  1:88631‑M2/28‑1 (MQ=255)                                          acaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                                                                                                                                                                                 <  2:133619‑M2/43‑1 (MQ=255)                                           caacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                                                                                                                                                                                >  1:35189‑M2/208‑251 (MQ=255)                                                  aacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtttt                                                                                                                                                                                                          >  1:244439‑M2/201‑250 (MQ=255)                                                     acaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCa                                                                                                                                                                                                      <  1:641512‑M2/54‑1 (MQ=255)                                                      caggcattattaaacgcatccgggaatacacctgtatttccatccctcccataggcagatgcttttgcgtcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaatccggtgcgtcctaatgtagccgtttctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAg                                                                                                                                                                                                     <  1:368161‑M2/55‑1 (MQ=255)                                                           gTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggggg                                                                                                                                                                                                 >  1:670804/1‑250 (MQ=255)                                                             cATCCCAGCCACGAATAAACTCGCCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGTCACGGAACCGGGACACCAACAGGTAATGCAGAGCCGTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                                                                                                                                               <  1:321201/250‑1 (MQ=255)                                                              attaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAtt                                                                                                                                                                                              <  1:607228‑M2/62‑1 (MQ=255)                                                              attaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAtt                                                                                                                                                                                              <  1:61932‑M2/62‑1 (MQ=255)                                                              aTCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAttt                                                                                                                                                                                             <  1:6738/251‑1 (MQ=255)                                                                    gCCACGAATAAACTCACCACGCAAATCAGGCAATTTATTGGGCGGATAAGCCTTTGCCAGTTCCGTGTATTCTTCAGCAGAAAAAGCGGCACCATTGCCTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACagg                                                                                                                                                                                       <  2:613688/251‑3 (MQ=255)                                                                        accgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCtt                                                                                                                                                                                    >  1:23324‑M2/179‑250 (MQ=255)                                                                             gaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATg                                                                                                                                                                                                                                                    <  1:346174‑M2/8‑1 (MQ=255)                                                                             gaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATGCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                                                                                                                              <  1:461507‑M2/78‑1 (MQ=255)                                                                             gaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattcaacccccactgactgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATg                                                                                                                                                                                                                                                    >  2:346174‑M2/174‑181 (MQ=255)                                                                              aatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCt                                                                                                                                                                             <  2:35189‑M2/79‑1 (MQ=255)                                                                                    actgtatttccaacccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtatccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAc                                                                                                                                                                       <  1:420302‑M2/85‑1 (MQ=255)                                                                                       cGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg                                                                                                                                                                    >  2:122010/1‑251 (MQ=255)                                                                                         atttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa                                                                                                                                                                  <  2:23324‑M2/90‑1 (MQ=255)                                                                                           aaTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGATGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCACAACCAACGGTTATGAAAAGAAAGAAATAACAAGCAAATGGCATCATTACTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAAGTACGCGAATc                                                                                                                                                                >  2:647658/1‑251 (MQ=255)                                                                                             ccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                                                                                                                                        <  1:343065‑M2/68‑1 (MQ=255)                                                                                             ccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                                                                                                                                        >  2:343065‑M2/158‑225 (MQ=255)                                                                                                           ggcagatgcttttgcggcattccaccccaactgaatgattactgattgctaaataccaccaatcatacccggaatagctatgaaaacggtgcgtcctaatgtagcagtagctgcattgagttttgctccttctcccaaaccaaCGTTTATTAAACTGAAGAAATAACAAGCAAATGGACTCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGTTATGTACGCGTATACACAAATGACCAGAac                                                                                                                                                >  2:621075‑M2/144‑251 (MQ=255)                                                                                                              agatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAAcaca                                                                                                                                             <  1:533082‑M2/111‑1 (MQ=255)                                                                                                                gtgcttttgcggcattccacccccactgaatgatcactgattgctcaatacccccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTTGCTATGTACGCGTatcaacaaatgcacagaaaac                                                                                                                                              >  2:486816‑M2/139‑238 (MQ=255)                                                                                                                            cattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                                                                >  1:627134‑M2/127‑250 (MQ=255)                                                                                                                                        aTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACt                                                                                                                    <  2:115483/250‑1 (MQ=255)                                                                                                                                              tgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAgg                                                                                                             >  1:82029‑M2/109‑251 (MQ=255)                                                                                                                                                      gattgcgcaatacctccaaccataaccgggatagctatgaaaccggtgcgtcctaagggagccgttgctgtattgagttttgctccttcgaccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATTCGAg                                                                                                      <  1:384679‑M2/150‑1 (MQ=255)                                                                                                                                                              aatcccacccatcataaccggtatagccatgaaaccggtgcgtcctaatgtagcctttgctgcattgagttttgcaccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATTTACGCGTATCAACAAAGGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGAttcgagctttttttg                                                                                             <  2:579407‑M2/159‑8 (MQ=255)                                                                                                                                                                            gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTg                                                                                                   >  1:556265/1‑231 (MQ=255)                                                                                                                                                                            gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTg                                                                                                   <  2:556265/231‑1 (MQ=255)                                                                                                                                                                             ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAgg                                                                              >  1:645017/1‑250 (MQ=255)                                                                                                                                                                                                  ggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGCCCGAAAGACCg                                                         >  2:155613‑M2/57‑251 (MQ=255)                                                                                                                                                                                                      ggCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTCTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAGGCTGATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACTTAATGAGCTGAACTGGGCAGGATGCTAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGAc                                                     <  1:78808/251‑1 (MQ=255)                                                                                                                                                                                                        ccACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACCAGAAAAGTGGCACAAAGTCCGAAAGGCCGGGACTg                                                   >  2:461831/1‑251 (MQ=255)                                                                                                                                                                                                           taatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGaa                                                 >  1:518840‑M2/48‑250 (MQ=255)                                                                                                                                                                                                                      cacCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAg                                     <  1:122010/251‑1 (MQ=255)                                                                                                                                                                                                                               gTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAGTTAACATGCTTATTGGCTCTGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATc                            <  1:96824/251‑1 (MQ=255)                                                                                                                                                                                                                                tAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGc                                                                                                                >  2:639087/1‑166 (MQ=255)                                                                                                                                                                                                                                tAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGc                                                                                                                <  1:639087/166‑1 (MQ=255)                                                                                                                                                                                                                                 agctgtgcaccTTCTCCCAAACCAACGTTTATTGAATTGAAGAATTAACAAGCAAATGGAATCATTGCTGCTTTTACCAAGGGGATTTAACATGCTGATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGGGCGGAACTGTGCAGGCAGCGATCTGAATTTTGAAGACAAGATAAGCGGCGAAAAGTCCGGAATGCCGGGACTGAAAAAATTGCTCAGGAGATTAGCgg                          <  2:557964/242‑1 (MQ=255)                                                                                                                                                                                                                                                 ccAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAGCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGt          <  2:670804/251‑1 (MQ=255)                                                                                                                                                                                                                                                    atccAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGt       <  1:441093/249‑1 (MQ=255)                                                                                                                                                                                                                                                          cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGa  >  1:292097/1‑250 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                          CCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGA  >  NC_000913/1209370‑1209868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.