New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2558913 (0.050)52 (0.860) 46/482 0.3 94.5% intergenic (‑175/‑86) pepD/gpt peptidase D/xanthine‑guanine phsophoribosyltransferase
?NC_000913 273955 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

TCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAATCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATC  >  NC_000913/273758‑274170
                                                                                                                                                                                                     |                                                                                                                                                                                                                       
gcGGGGTGTGCTCGAAGACAGTCTGAAACTCAGGATGAACATGGAAAAGACTAAAATCCCCCATGTTAATGACGGCTTTATCTCTCTGGGGCACAGGCGCAATCGCAAACGCAGTCGTTATTGCGAGATGCGAGTGGTCTCAACAATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcagtt                                                                                                                                                                    <  2:266121/250‑4 (MQ=255)
                                                                                                        gCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGAGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTATTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtct                                                            <  1:327929/251‑1 (MQ=255)
                                                                                                                                                                  cAGAAACTTCGCCGCATCGCTGACAGCACTGATATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGTCCTTTCATTTCTTCATGATTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCAATGACGTCTCATTTGGTCCGCCCGAAACAGGTTGTCCAGCGTGAATAACATc  >  2:484429/1‑251 (MQ=14)
                                                                                                                                                                                                     |                                                                                                                                                                                                                       
TCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAATCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATC  >  NC_000913/273758‑274170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.