Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,105,699 IS1 (+) +9 bp coding (286‑294/312 nt) ymdA → uncharacterized protein YmdA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 290634 =NA (NA)67 (1.110) 61/482 0.1 98.5% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1105699 = 1 (0.020)coding (286/312 nt) ymdA uncharacterized protein YmdA
* ? NC_000913 = 291401NA (NA)40 (0.660) 36/482 0.6 97.5% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 1105707 1 (0.020)coding (294/312 nt) ymdA uncharacterized protein YmdA

CGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGAGGCCTA  >  NC_000913/291157‑291648
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                         
cGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAttt                                                                                                                                                                                                                                                     <  1:362486/251‑1 (MQ=31)
   cATTAATGGCCATATCAATGCTTTTCAGGTGCGTACCGGGTTGAGAAGCGGAGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGCGAGGGCGGAGATAGCGCTGGTTTCCGGACGTGCTTTTGCCGTTACGCACCAACCAGTCAGTAGATGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCCCAAAAACACCATACTACCCTAAATCAGTACATTGGCAACATCACCGAATTTTc                                                                                                                                                                                                                                                   >  2:361892/1‑250 (MQ=11)
      tcagtgCCATACCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCGGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACGCCATCATACACTAAATCAGTAAGTTGGCAGCTTCACCGAATTTTCAGc                                                                                                                                                                                                                                                <  2:103386/245‑1 (MQ=255)
               tatCAATGATTTTCTGATGCGAACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCCGAGCTTTTGCCGTTACGCACCACGCCGGCAGTAGCTGAACAAGAGGGGCCGCTCATAGGAACAGAAGCCACAGGCGCCACTCAAAAACACCATCATAAACTAAATACAGAAGTTGGCAGCACCACCGAATTTTACGACCGGATGttt                                                                                                                                                                                                                                      >  2:37720/1‑251 (MQ=11)
                 gcAATGAGTTGCTGGTGCGTAACGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTATTACGGCAGTGAGAGCAGAGAGAGCGCTGATGTCCGGCAGTGCTTTGGCCGTTACGCACCACCCTGTCAGTAGCTGAACAGGAGGGAAAGCTGATAGAAACAGAAGCCACTGGAGCACATCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCAGCACCGAATTTTCAGCCCGGATGTTTCa                                                                                                                                                                                                                                    <  1:494974/250‑1 (MQ=14)
                  cAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTACCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCa                                                                                                                                                                                                                                    <  1:293765/250‑1 (MQ=255)
                    aTGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGCACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCAACGAATTTTCAGCCCGGATGTTTCACGt                                                                                                                                                                                                                                 >  1:252080/1‑251 (MQ=255)
                             tGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTc                                                                                                                                                                                                                       >  1:484465/1‑251 (MQ=255)
                             gggTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCAGGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCATCCCGGATGTTTCACGTACTTATGTc                                                                                                                                                                                                                       <  2:493495/250‑1 (MQ=255)
                                    tACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCCGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCAACTAAAAAACACCATCATAAACTAACTCAGTGAGTAGGCAGCATCACCGAATTTTCAGCCCGGCTGTTTCACGTTCCTATGACAAATATc                                                                                                                                                                                                               >  2:232835/1‑251 (MQ=14)
                                     aCCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGCACAGGAGGGACAGCCGATAGAAACAGAAGCCATTGGAGCACCTCACAAACACCATCTTACACTAAAACAGTTAGTTGGCAGCAACACCGAATTTTCAGCCCGGATGTTTCCAGTACCTATGTCGATTATCt                                                                                                                                                                                                              >  2:435911/1‑251 (MQ=14)
                                     aCCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCt                                                                                                                                                                                                              <  1:586424/251‑1 (MQ=255)
                                       cGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAACACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTgg                                                                                                                                                                                                            >  1:441344/1‑251 (MQ=255)
                                          gtggagaAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGTCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGTATGTTTCACGTACCTATGTCGAATATCTGGCCg                                                                                                                                                                                                         <  2:554816/248‑1 (MQ=255)
                                          gTTGAGACGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGCAAAGGAGGGTCAGATGCTAGAAACAGAAGCCACTGGAGCAACTCAAAAACACAATAATAAAATAAATAAGGAAGTTGGCACAAGCACCGAATTTTCAGCCAGGATGTTTTCCGTACCTAAGTcaaaaacttggccg                                                                                                                                                                                                          >  2:587541/1‑238 (MQ=11)
                                             gagaAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGAt                                                                                                                                                                                                       >  1:649486/1‑250 (MQ=255)
                                                       gtAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCGGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGa                                                                                                                                                                                            <  1:37720/251‑1 (MQ=255)
                                                         aaGTGAACTGCCGTGGCCTTGTTTATCGGCAGTTAGAGCTGAGTTAGCTCGTATGTCCTACAGTGCTTTTTCCGTTACGCGCCACCCCGGCAGTAGCTGAACAGGAGTGACAGCGGAGAGAAACATAAGCCACTGTAGCACCTCAAAATCACCATTATTCGCTAATTCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCTGGATGTTTCACGTACCTAGTCCGAATATCTTGTCGATAATGTTGCGGATc                                                                                                                                                                                          <  2:286333/251‑1 (MQ=255)
                                                              aaCTGCCGTTGCCATGTTTTACGGCAGTGAGCGCAGAGATTGCGCGGATGTCCGGCAGGGCTTTTGCCGTTACGCACCACCCCGTAATTAGCTGAACAGGAGGGCCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGTCCGATAAGGTTGCGGATCGagaa                                                                                                                                                                                     <  2:542844/251‑1 (MQ=18)
                                                                cggCAGTTGCCATGTTTTACGGCAGGGAGAGCATAGATAGCGCGGAATTCCGGCAGTGCGTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGTAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGTCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAACGTTGCTGATAGagaaga                                                                                                                                                                                   <  2:96711/249‑1 (MQ=17)
                                                                cTGCAGTTGACATGTTTTACGGCAGTGAGAGCACAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACCCACCCCCCAGTCCGTAGCTGAACAGGAGGGACAGCTGATAGAAACCGAAGCCACTGGAGCACCTCCAAAACACCATCATCAACTAAATAAGTAAGTTGGCAGCCTCAACGAATTTTCAGCCCGGCTGTTCCCGTTACCTAAGTCAAATCACCGGCCGATAAGGTTggcactcgagaagg                                                                                                                                                                                   >  2:674275/1‑238 (MQ=2)
                                                                     tcctatctGTTTTGCGTCAGGGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTTCGCACCACCCCGTCAGTAGATGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGAt                                                                                                                                                                               <  2:399855/243‑1 (MQ=18)
                                                                     gTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGGCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACAGCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTCCCTATGTCGAATATCTGGCTGATAAGGTTGCGGATCGAGAAGAGGATg                                                                                                                                                                              <  1:290534/251‑1 (MQ=255)
                                                                           aTGTTTTACGGCAGGGAGAGCAGAGATAGCGATGATGGCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCACAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTAAGCACGGCTGTTTCACGTACCTATGTAGACTAACTGGCCGCAAAGGTTGCGGATCAGGAAGAGGATGCAGAgg                                                                                                                                                                        >  2:391088/1‑251 (MQ=14)
                                                                             gTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGAt                                                                                                                                                                               >  1:399855/1‑242 (MQ=255)
                                                                                    ggCAGTGAGATCAGAGATAGGGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCCCCACGGCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTgg                                                                                                                                                               <  2:270384/251‑1 (MQ=255)
                                                                                    ggCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGACGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAGTTTCAGCCCGGATGTTTCAAGACCCTATGTCGAATATCTGGCCGCTAAGGTTGCGGATCGAGCAGAGGATGCAGAGGAATATCTgg                                                                                                                                                               >  2:506429/1‑251 (MQ=18)
                                                                                           agagaagagaTGGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCTCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAAt                                                                                                                                                        <  2:523519/251‑1 (MQ=255)
                                                                                             agCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATc                                                                                                                                                       >  1:95603/1‑250 (MQ=255)
                                                                                                agagATAGCGCTGATGTCCGGCAGTGCTTTTGCCGATACGCACCACCCCGTCAGTAGATGAACCGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATAAACTAAATCAGTAAGATGGAAGCATCACCGAATTTTCAGCCCGGCAGTTTAACGTACCTATGTCAAATATCTGGCCGATAAAGTTGCGGATCGAGGAGAGGATGCAGAGGAatttatggatacaaacatgg                                                                                                                                                   >  2:145696/1‑233 (MQ=17)
                                                                                                    aTAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGc                                                                                                                                               <  1:464446/251‑1 (MQ=255)
                                                                                                         gcTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCgtg                                                                                                                                          >  1:512290/1‑251 (MQ=255)
                                                                                                            gATGTCCGGCAGTGCTTTTGCCGTTACGCACCCCCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAAGCAGTAAGTTTGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCgtgt                                                                                                                                         <  2:207613/249‑1 (MQ=255)
                                                                                                                      aGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGACACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTgg                                                                                                                             >  1:408302/1‑251 (MQ=255)
                                                                                                                          cTTTTGCCGTTACGCACCACCACGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGGGCACCTCAAAAACACCATCATACAGTAAATCAGGAAGATGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAGGGTTGCGGATCGAGACGAGTAATCAGAGGTATATCTGGAAGATATCATGGCGGCTCgtgataacgtagcaggccgg                                                                                                                         >  2:21615/1‑234 (MQ=18)
                                                                                                                            gttGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACGAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATg                                                                                                                         <  1:611561/248‑1 (MQ=255)
                                                                                                                               gccggtaagCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCt                                                                                                                    <  2:512290/243‑1 (MQ=255)
                                                                                                                               gCCGTTACGCCCCCCCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGc                                                                                                                     <  2:484465/250‑1 (MQ=255)
                                                                                                                                ccGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTg                                                                                                                   <  1:57673/251‑1 (MQ=255)
                                                                                                                                    tACGCGCCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGGCGAATATCTGGGCGATAAGGTTGCGGATCGAGAAGATGATGCAGAGGAATATCGGGAAGGAATCATGTAGGCTCGTGGCACCGTTGCTGGCATGGGGCTGGTg                                                                                                                <  2:46069/250‑1 (MQ=25)
                                                                                                                                        caccacCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGCAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATggg                                                                                                           >  2:544963/1‑250 (MQ=255)
                                                                                                                                         cacaccCCGTCAGTAGCTGGACAGGAGGGACAGCTGATAGAAACAGAAGCCCCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCTGGTTAACGTTGCTGGCATGGGGCTGGTGATGGAg                                                                                                          <  2:441344/249‑1 (MQ=255)
                                                                                                                                         accaccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATgg                                                                                                            >  1:272539/1‑249 (MQ=255)
                                                                                                                                                            aaCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATg                                                                                       <  1:103382/251‑1 (MQ=255)
                                                                                                                                                                  ggggACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAgg                                                                                 <  2:649486/250‑1 (MQ=255)
                                                                                                                                                                        aGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTCAATCAGTAAGTTGGCAGCATCACCGACTTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCAGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCCCGTGTTACCGTTGATGGCATGGGGCTGGTGATGGAGGCGCAGGATTACTTCGATGGCGAGGCCGAt                                                                            >  1:350450/1‑250 (MQ=255)
                                                                                                                                                                          cTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTc                                                                                                                                                                                                                                     <  2:260752/97‑1 (MQ=255)
                                                                                                                                                                          cTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTc                                                                                                                                                                                                                                     >  1:260752/1‑97 (MQ=255)
                                                                                                                                                                            gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAAAGGAATATCTGGAAGCAATCATGGAGGCTCGAGTTACCGTTGAGGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGCTGGCGTGGCCGAtggaat                                                                       >  2:457308/1‑246 (MQ=38)
                                                                                                                                                                                     aGAAGCCACTGGAGCACCTCAAAAACACCATCATACTCTAAATCAGTAAGTTTGCAGCATCACCGAATTGTCAGCCCGGATGGTTCACGTACGTACGTCGTATATCTGGCAGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTTGTGTTACCGTTGCTGGCATGGGGCTGGTGAGGGAGGTGCAGGATTACTGCGATGTCGATGCCGATAGACTGGCGAAGGc                                                              <  2:408302/251‑1 (MQ=38)
                                                                                                                                                                                          ccACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGtggc                                                         >  1:673197/1‑251 (MQ=255)
                                                                                                                                                                                            aCTGGAGCACCTCCAAAACACCATCATACACTAAATCAGTCAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGCGCAGAGGATGCAGAGGAATATCTGGAAGCAATCTTGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGGTTACTTCGATTGCGAGGCCgctggcccggcggaggcgatgctg                                                       >  2:309764/1‑228 (MQ=255)
                                                                                                                                                                                            aCTGGAGCACCTCAAAAACACCATCATACACTAAATCATTAAGTGGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGTCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGACTATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGACGGCGtggctg                                                       <  2:272539/251‑1 (MQ=255)
                                                                                                                                                                                                 aGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCg                                                   >  1:583412/1‑250 (MQ=255)
                                                                                                                                                                                                       tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTacac                                            >  1:482873/1‑251 (MQ=255)
                                                                                                                                                                                                              cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATTGACTGGCGAAGGGGTGGCTGGCCGGGTACACACCGCa                                      >  2:169755/1‑250 (MQ=255)
                                                                                                                                                                                                                    catACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTTCACACCGCAAATCaa                                <  1:506429/250‑1 (MQ=255)
                                                                                                                                                                                                                                     aaGTTGGCAGCATCACCGCCTTTTCAGCCCGGATGATTCACGTACCTCTGTCGACTATCTAGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGAAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGAAGGCGAGGCCGATAGACTGGCGCAGGCGCGGCTGGCCGGGTACACACCGCCAATCAAGTCGTTGCAAGAtaggg               >  2:432146/1‑247 (MQ=255)
                                                                                                                                                                                                                                       gTTGGCAGCATCACCGAATTTGCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTCCGATGGCGAGGCCGATAGACTGGTGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGt             <  1:82802/251‑1 (MQ=255)
                                                                                                                                                                                                                                                  cACCGAATTTTCAGCCTGGATGTGTCACGTACCTATGTCGAATATTTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTTGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGAGGCCTa  <  2:32641/251‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                         
CGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGAGGCCTA  >  NC_000913/291157‑291648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.