Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,680,490 G→A C752C (TGC→TGT yphG ← DUF5107 domain‑containing protein YphG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,680,4900GA97.0% 101.8 / NA 33C752C (TGC→TGTyphGDUF5107 domain‑containing protein YphG
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (13/19);  minor base C (1/0);  total (14/19)
Fisher's exact test for biased strand distribution p-value = 4.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

GTCGTTTCTCCGGTGTGGCTCCACTTAACTTATCCAGCAAATCCCGTTCGAAAAGCAGACGTGCATCCTGCGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAGTCCAGTGCGTTCAGCATCTCTGCCGCCAGGGTGGGCATTCCCC  >  NC_000913/2680246‑2680716
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                     
gTCGTTTCTCCGGTGTGGCTCCACTTAACTTATCCAGCAAAGCCCGTTCGAAAAGCAGACGTGCATCCTGCGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCt                                                                                                                                                                                                                                 <  1:26134/251‑1 (MQ=255)
             ggtgtgtccgcttaacttaTCCAGCAAACCCCTTTCGAAAAGAAGACGGGCATCCGGCGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAAGCTTGTTGCTTAGTCCACGCATGGATCGCTAACCCGCGCCAGCTGTCGGCAAACTCCGGCGACATCTCTACTCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAg                                                                                                                                                                                                                  <  2:128982/241‑1 (MQ=255)
                             ttaTCCAGCAAATCCCGTTCGAAAAGCAGCCGTGCATCCTGCGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTCGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTc                                                                                                                                                                                                  >  1:318898/1‑251 (MQ=255)
                                         ccccGTTCGAAAAGCAGACGTGCATCCTGCGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAg                                                                                                                                                                                      <  1:305180/250‑1 (MQ=255)
                                                 gAAAAGCAGACGTGCATCCTGCGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCa                                                                                                                                                                              <  2:37530/251‑1 (MQ=255)
                                                  aaaaGCAGACGTGCATCATGCGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTCTTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTCGCTACGTTTGTTGTAGTAGAAACAAGCTAGAAAATGGCGAGCAAACCCGCACTCTTCAATACTCTCCACCGCCGCCAc                                                                                                                                                                             >  2:274157/1‑251 (MQ=255)
                                                           cGTGCATCCTGCGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTcc                                                                                                                                                                      >  1:108874/1‑249 (MQ=255)
                                                                         cgcAAGCTGATAAGCATTATCAAGATATCGCGCGGCCAGCTCATAATCGGGTTGCTTATTCCTCGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCCCTACGCAACGTTGCGAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAAc                                                                                                                                                      <  1:246116/251‑1 (MQ=255)
                                                                                     aGCATTATAAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTCACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATATCTACGCAACGATGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAACCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCg                                                                                                                                         >  2:375115/1‑251 (MQ=255)
                                                                                            acAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGTATCGCTACCCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAAGGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAATTGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGAc                                                                                                                                  <  1:38426/250‑1 (MQ=255)
                                                                                              aaGATAACGCGCGGCCAGCTCATAAGCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACCCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACAt                                                                                                                                <  1:286397/251‑1 (MQ=255)
                                                                                                             cAGCTCATAAGCGTTTTGCTTATTCCACGCTGGGACCGCTAACCCGCGCCAGCGGGCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCAAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGa                                                                                                                 <  2:108874/251‑1 (MQ=255)
                                                                                                              aGCTCATAACCGCGTTGCTTATACCACGCTTGGAGCGCAATCCCGCGCCAGCCGTCGGCAAACTCCGGCTACATCTCTACGAAATGTTGCCAAAAGGCAATGGCTTTGTTGTATCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAAGGGCGATCAAACCAGCACTCTCCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGAc                                                                                                                <  2:112294/251‑1 (MQ=255)
                                                                                                               gCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGCCCTCAATGGCTTTTGCGAcc                                                                                                               >  2:334082/1‑251 (MQ=255)
                                                                                                                  cagaaTCGTGTGGCTTATCCCACGCTTGGATCGCTACCCCGCGCCAGCCGTCGGCAAACTCCGGCGACTTCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAg                                                                                                             <  2:46238/247‑1 (MQ=255)
                                                                                                                        cGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAACAGGCTATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGCAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGcc                                                                                                       >  2:286841/1‑250 (MQ=255)
                                                                                                                                               aTCGCTCACCCGCGCCAGCCGTCGGCAAACTCCGGCGACAACTCTACGCAACGTGGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCCCTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCt                                                                               <  2:79957/251‑1 (MQ=255)
                                                                                                                                                           cgcCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTa                                                                   <  1:59335/251‑1 (MQ=255)
                                                                                                                                                                   gTCGGCAAACGCCGGCGACATCTCTACGCACCGTTGCCAAAAGGCAATGGCTTTGTTTAAGCTACGTTTGTTGTAGTAGAAACAAGTTACTAAAGTGCGCGACAAACAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCCTCCAGCGTATTCGGGAACCGGCCAAACAGCGGGAAGACATCAATGGTTCTTGCGACCAGTTCTCCAAGTACGGCTTTCGGCAGCAAgatcatttgcaggtaacgcgccc                                                           >  2:53079/1‑229 (MQ=255)
                                                                                                                                                                      ggCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCg                                                        <  1:119819/251‑1 (MQ=255)
                                                                                                                                                                        cAAACTCCGGCGACCTCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTg                                                      >  2:240944/1‑251 (MQ=255)
                                                                                                                                                                                 gCGACATCTCTACGCAACGTTGCAAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTGGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAg                                             <  1:334082/251‑1 (MQ=255)
                                                                                                                                                                                   gACATGTCTAAGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGAACTCTTCAATACTATCCAGCGCCGCAACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGACGAAAGCTGGCTTGAAGGTAAAGGGGCAGCGGGGGCAGGCAGTc                                           >  2:168297/1‑251 (MQ=255)
                                                                                                                                                                                            aCGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAGTCCAGTGCGtt                                  <  1:80479/251‑1 (MQ=255)
                                                                                                                                                                                             gtcAACGCTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTATAGTAGAAACAAGATAGTAAATGGCGCGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGAATTCGGGAAACGACAAAACTGAGGGAAGACATCAATGTCTTTTGCGACAAGTTCACCAGGTTCGGCTTTCGGAAGCAAGCTGGCTTGCATGTAAAGCGGCAGGGTGAGCTggagaacccgttcgttc                                 >  2:206626/3‑236 (MQ=255)
                                                                                                                                                                                                aacgtggaaaaaaGGAAATGGCTTTTTTGTAGTTACGTTTTTTGTGTGAGAAACAAGCTAGTAATTGGCGAGCAACCCAGCACTCTCCAATACCCCCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAGTCCAGTGCGTTCAGc                              <  2:241432/242‑1 (MQ=255)
                                                                                                                                                                                                     tGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAGTCCAGTGCGTTCAGCAtctc                         >  1:292534/1‑251 (MQ=255)
                                                                                                                                                                                                      gCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAGTCCAGTGCGTTCAGCAtctc                         <  1:73040/250‑1 (MQ=255)
                                                                                                                                                                                                        cAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAGTCCAGTGCGTTCAGCATCTCTgc                      >  1:65281/1‑251 (MQ=255)
                                                                                                                                                                                                          aaaGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTg                                                 >  1:347804/1‑222 (MQ=255)
                                                                                                                                                                                                            aGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGCAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGACTTGAAGGTAAAGCGGCACAGGGCGCTGGCGGTcacgggcggtccgcatctttgacccc                  >  2:339060/1‑226 (MQ=255)
                                                                                                                                                                                                                    gCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACGCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAGTCCAGTGCGTTCAGCATCTCTGCCGCCAGGGTggg          <  2:261659/251‑1 (MQ=255)
                                                                                                                                                                                                                            gtatcTACGTTTGTTGTAGTAGAAACAAGCTAGTAAATGGCGAGCAAACCAGCCCTCTTCAATACCCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAGTCCAGTGCGTTCAGCATCTCTGCCGCCAGGGTGGGCATTcccc  <  1:240944/247‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                     
GTCGTTTCTCCGGTGTGGCTCCACTTAACTTATCCAGCAAATCCCGTTCGAAAAGCAGACGTGCATCCTGCGGCGCAAGCTGATAAGCATTATCAAGATAACGCGCGGCCAGCTCATAATCGTGTTGCTTATTCCACGCATGGATCGCTAACCCGCGCCAGCCGTCGGCAAACTCCGGCGACATCTCTACGCAACGTTGCCAAAAGGCAATGGCTTTGTTGTAGCTACGTTTGTTGTAGTAGAAGCAAGCTAGTAAATGGCGAGCAAACCAGCACTCTTCAATACTCTCCAGCGCCGCCACTTCTTCCAGCGTATTCGGGAAACGGACAAACTGCGGGAAGACATCAATGGCTTTTGCGACCAGTTCGCCACGTTCGGCTTTCGGCAGCAAGCTGGCTTGCAGGTAAAGCGGCAGCGTGCGCTGGCAGTCCAGTGCGTTCAGCATCTCTGCCGCCAGGGTGGGCATTCCCC  >  NC_000913/2680246‑2680716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: