| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 23,896 | 2 bp→TA | coding (1506‑1507/2817 nt) | ileS → | isoleucine‑‑tRNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 23,896 | 0 | C | T | 96.0% | 222.7 / ‑2.3 | 76 | V502V (GTC→GTT) | ileS | isoleucine‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base T (26/45); total (29/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
| * | NC_000913 | 23,897 | 0 | G | A | 97.3% | 228.2 / ‑2.7 | 76 | D503N (GAT→AAC) | ileS | isoleucine‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (27/44); total (29/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
GTCAGCATGGATCAGAAAGGTCTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGTGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTTGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TCGAT‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGATCAGTACGTGAAAGTGCCGGACACATTGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAACACCGCGGCTGGTTCATGTCTTCCCTAATGATCTCCACCGCGATGAA > NC_000913/23657‑24132 || gtcagcgaggaacagaaaggacctcgtgcgCAGTCACTGAAAGAGATCAAAGGCGTGCAGGGGATCCCGGACTTGGGCCATGCGCGTATCGAGCCGATGGTTGATAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTTCCGATGTCACGGTTCGTGCACAATG‑ACGCGGAAGAGCTGCATGCGCGTACCCTCGATCTGATGGAAGAAGTTCCAAAACGCGTTGAAG‑TTAAT‑GGCATCCa < 2:483235/227‑1 (MQ=255) cAGCATGGATCAGAAAGGTCTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAgg < 1:202902/251‑1 (MQ=255) agacaGGTCTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGAt < 1:395486/247‑1 (MQ=255) cTGCGTGCACAGCCACTGAAAGAGCTCGAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTGACTCCCGTCAGCGACCCTGGGGCGTACCGATGTCACTGTGCGTGAACAAAGGACA‑GGAAGAGCAGCATCCGCGTACCCTCATGCCGATGGAAGCCGAGGCAAAACGCGGTGAAGGTC‑AC‑GGCATCCACGCCGGGTGGGAGCTCGATGc > 2:298551/1‑251 (MQ=255) ggcAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACATGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAagag < 1:23250/250‑1 (MQ=255) cgcAGTCACTGAAAGAGAGCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTAGCGAGGCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAagag < 2:125094/251‑1 (MQ=255) tCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCAGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGGTGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATATCGATGCGAAAGAGATcat > 2:409289/1‑249 (MQ=255) cACTGAAAGAGAGCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTc < 1:79061/251‑1 (MQ=255) tGAAAGAGGTCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCATCCTGAC‑TGGTGTCTCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAGG‑ACACGCACGAGCTGCATCCGCGTACCCTCGAACTGCTGGAAGCAGTGGCAACTCCCGTTGAGG‑AGAAC‑GGCATCCAGGCGTGGTGGGaccccggtgagaacgagatcaacggg > 2:444009/1‑226 (MQ=255) aTCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGc < 1:49613/251‑1 (MQ=255) aGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCTAAAGAGATCCTCGGCGACGAAGCTGacc < 1:433753/251‑3 (MQ=255) gCGTGCAGTGGATCCCGGACTGGGGTCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAg < 1:112495/251‑1 (MQ=255) gCAGTGGATCCCGGACTGGGGCCAGGCGAGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCTAAATAGATCCTCGGCGACGAAGCTGACCAGTatg < 1:145560/251‑3 (MQ=255) ggATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGaaa < 1:355721/251‑1 (MQ=255) aTCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGACATGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCCGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAACTGACCAGTATGTGTAAgg > 2:370176/1‑250 (MQ=255) ccGGTCTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTACCCGTCCTGAC‑TGGTGTATCTCCCGTCTGCGCCCCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACGCGGAAGAGCTGCATCCGCGTACACGCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGcc < 2:128615/251‑1 (MQ=255) ccGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGcc < 1:274520/251‑1 (MQ=255) cgggggCCCGGGGCGTATCGAGTCGATGGTTGCTAACCGGCCTGACATGG‑GTATATCCCGTCAGCGCACCTGGGGCGTACCGATGACACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATACAGGCGTGGTGGGAGCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGata < 2:308383/249‑3 (MQ=255) tGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGatac > 1:85138/1‑248 (MQ=255) tGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGGGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGCCGAAGCTGACCAGTCTGTGAAAGGGCCGGatac > 2:242477/1‑248 (MQ=255) ggtgccgggCGCTTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTTGGGCGTACCGATGGCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACGGATGGAAGAAGTGGCAAATCGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGata < 2:182285/242‑3 (MQ=255) ggggcagagggcgTATCGAGTCGAGGGTTGCTAACCGTCCTGAC‑TGTTGTATCTCCCGTCAGCGCTCCGGGGGCGTACCGATGTCACTGGTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCTCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCACCCAGGCGTGGTGGGATCTCGATGCGATAGAGATCCTCGGCGACGAAGCTGCCCATTATGTGAAAGTGCCGGatact < 2:419814/241‑5 (MQ=255) aGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGatactctcgac < 1:491466/251‑11 (MQ=255) aGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCGCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGatactctcgac < 2:461034/251‑11 (MQ=255) aTCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGatactctcgacgtatggtt < 1:169492/251‑19 (MQ=255) gggcGATGGTTGCGAACCGGCCTGAC‑TGGGGTAACTCCAGAAATCGCACCAGGGGCGGACCGATGTCACTGTACGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATTCAGTCGTGGTGGGATCTCGATACGAAAGAGAGCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTggc < 2:249766/248‑3 (MQ=255) aGTCGATGGGTGCTAACCGTCCTGAC‑TGGCGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTAACCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGatactctcgacgtagggtttgtc > 2:293340/1‑229 (MQ=255) gTCGATGGTTGCTACCCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAg > 2:306909/1‑160 (MQ=255) gTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAg < 1:306909/160‑1 (MQ=255) aTGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCgg < 2:435776/251‑1 (MQ=255) aTGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCgg < 1:470153/251‑1 (MQ=255) tAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGGATGTGAAAGTGCCGGACACTCTCGCCGAATGGTTTGCCTCCGGATCTcccc > 2:154678/1‑251 (MQ=255) aaCCGGCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTGCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACGGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAGC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACGCTCGACGTATGGTTTGACTCCGGATCTACCCa < 2:411794/251‑1 (MQ=255) aCCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCAc > 1:238582/1‑251 (MQ=255) c‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGCTGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGCGATCCTCGGCGACGAAGCTGACCAGTATGTGACAGTGCCGGATACTCTCGCCGTATGGTTTGACTCCGGATCTACCCCCTCTTCtgttg > 2:369942/1‑251 (MQ=255) c‑TGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGCCCAGTATGTGAAAGTGCCGGATCCTCTCGACGTATGGTTTGACTACGGATCTACCCACTCTTCtgttg > 2:420372/1‑251 (MQ=255) ggTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCGTCtgttg < 1:226231/249‑1 (MQ=255) tATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACg > 1:306020/1‑251 (MQ=255) ctcCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGc > 1:46217/1‑251 (MQ=255) cccGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGt > 1:174440/1‑251 (MQ=255) gTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCg < 2:83428/251‑1 (MQ=255) aGCGCAACTGGCGCGTACCAGTGTCCCTGTTCGTGCACAAAG‑GCACGGCAGAGCTGGATTCGAGTACCCTCGAACTGAGGGAAGAAGGTGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCGGTTGTTGACGTGCGTCCGGaa < 2:118366/251‑1 (MQ=255) gcgcACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTTCCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAAt < 1:355593/251‑1 (MQ=255) gcACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAAttt < 1:231656/251‑1 (MQ=255) ccccTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACAAGGAAGAGCTGCAGCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGAGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTg < 2:225673/249‑1 (MQ=255) cACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGACGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTACGGAATTTg > 2:415489/1‑251 (MQ=255) ccTGGGGCGTACCGATGGCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGcc < 1:360500/251‑1 (MQ=255) cgtacctaggtcactgtgccggCACAAAG‑ACACGGAAGAGCTGCATCCTCGGACCCGCGAACTGATGGAAGAAGTGGCAAAGCGCGTTGAAG‑T‑TATCGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACTAATCTGACCAGTAGGTGAAAGTGCCGGATACTCTCGACGTATGGTTGGATTCCGGATCTTCCCACTTTTCTTTTGTTGACGTGCGTCCGGAATTTGCCGGTCACg < 2:463813/230‑1 (MQ=255) gtACCGATGTCACTGCTCGGGCTCAAGG‑ACTCTGTAGTGTGGCATCCGCGTACACCCGAACTGATGGGAGAAGTGGCAAAGCGCGTTGAAG‑TTAAC‑TGCATCCAGGCGGGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGAGCCTGATACTCTCTTCGTAGGGTGCGACTCCGGAGCTACCCACTCGTCTGTTGGTGACGTGCGTCCGGAATTTGCCggctacgc < 2:458354/251‑7 (MQ=255) cGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCg > 1:119022/1‑251 (MQ=255) gTCACTGTTAGAGCACAAAG‑AAACGGAAGAGATGCCTCCGCGTACCCTCGACCTGCTGGAAGAAGTGGCAAACCGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGTCGTCTGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGCCGTGAGTCCGGAATTTGCCGGTCACGCAGCGGAcc > 2:500538/1‑250 (MQ=255) tCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACAt > 1:213132/1‑251 (MQ=255) cACTGTTCGTGCACAAAT‑GCACCGAAGATCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACAt < 1:30699/250‑1 (MQ=255) cACTGTTCGTGCACAAAG‑ACTCGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGAGCTCGATGCGAAAGAGATCCTCGGCGACGAAGTTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACGCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATg < 2:177918/251‑1 (MQ=255) ggtCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCGCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCGTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTa < 2:137850/247‑1 (MQ=255) tCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTg > 1:289218/1‑251 (MQ=255) caAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGCCCGGAATTTGCCGGTAACGCAGCGGACATGTATCTGGAAGGtt < 1:441694/251‑1 (MQ=255) aaaG‑ACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCCTCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGCAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAACGGCCATGTATCTGGAAGGTTc > 2:131690/1‑251 (MQ=255) agagCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGTAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGTCGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGCATTTGCCGGTCACGCAGCGGCCATGTATCTGGTAGGTTCTGAcccgcacc > 2:150548/1‑245 (MQ=255) gagCTGCATCCGCGTACCCTCGAACTGATGTAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACGCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCTGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACcg < 1:23998/251‑1 (MQ=255) gCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACcgtggtt < 1:262738/251‑6 (MQ=255) aTCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACcgtggttgg < 1:385456/251‑8 (MQ=255) tACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCCGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATgg > 2:11691/1‑250 (MQ=255) aCCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGt < 1:371679/250‑1 (MQ=255) aCCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTc > 1:7771/1‑251 (MQ=255) cccTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTc < 1:502111/250‑1 (MQ=255) cccTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTCt > 1:366720/1‑251 (MQ=255) cgcgAACTGATGGAAGAAGGGGCCAAACGCGTTGCAG‑GTTAC‑GGCATCCAGGCGTGGTGGGATCTATATGCGAAAGAGATCCTCGGCGAAGAAGCTGACAAGTATGTGAAATTGCCGGATACTCTCGACGTATGGTTTGCCTCCGGATCTACCCACTCTGCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCTGCACCGTGGTTGGTTCATGTCtgc < 2:373539/248‑3 (MQ=255) cgAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTCTTccc > 1:8109/2‑251 (MQ=255) gAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTAccc < 1:470990/151‑1 (MQ=255) gAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTAcac > 2:470990/1‑149 (MQ=255) agaagTGGCAAAACGCGTTGCAG‑TTAAC‑GGCATCCAGGCGTAGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGGGCCGGATACTCTCGACGTATGGATTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACAGTGGTTGGTTGATGTATTCCCTAATGATCTccc > 2:333189/1‑250 (MQ=255) gaagTGGCAAAACGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTCTTCCCTAATGATCTCCAc < 1:73381/251‑1 (MQ=255) aaaCGCGTTGAAG‑TTAAC‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGACCAGTATGTGAAAGTGCCGGATACTCTCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTCTTCCCTAATGATCTCCACCGCGATGaa < 1:170297/251‑1 (MQ=255) ttGAAG‑TCGAT‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGATCAGTACGTGAAAGTGCCGGACACATTGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGt < 2:144464/188‑1 (MQ=255) ttGAAG‑TCGAT‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGATCAGTACGTGAAAGTGCCGGACACATTGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGt > 1:144464/1‑188 (MQ=255) || GTCAGCATGGATCAGAAAGGTCTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGAC‑TGGTGTATCTCCCGTCAGCGCACCTGGGGTGTACCGATGTCACTGTTCGTGCACAAAG‑ACACGGAAGAGCTGCATCCGCGTACCCTTGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAG‑TCGAT‑GGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGATCAGTACGTGAAAGTGCCGGACACATTGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAACACCGCGGCTGGTTCATGTCTTCCCTAATGATCTCCACCGCGATGAA > NC_000913/23657‑24132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |