| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,638,818 | G→C | G214A (GGC→GCC) | creD → | putative inner membrane protein CreD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,638,818 | 0 | G | C | 94.0% | 131.2 / 3.5 | 50 | G214A (GGC→GCC) | creD | putative inner membrane protein CreD |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base C (20/27); total (22/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.03e-01 | |||||||||||
TAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGGCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGG > NC_000913/4638590‑4639059 | tAGGCACGCCCTTTATTGTGATTTGTGACGGGGATGCGCGTTGGATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGTGCTGGCCATTGAACCCGGCACCGGGTTAGAGCTAGGCGGGCAGGGCGGGCATATCCCTTTACCCGAAGGTGACTGGCGGAAGTATAACCTGAAGTTGAATATGGCCCTGAATTTAATCGGTACCGTCGATCTTTCTATGGTGCCTGCCGGGCGTAATAGCGAAAt < 2:434649/247‑1 (MQ=255) aGGCAAGCCCTTTATTGGGATTAGCGTCGGGGAGGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCTTTGAACCCGGCACCGGGTTAGAGAAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCATGCCGGGCGTAATAGCGAAATGCCCt < 2:357375/251‑1 (MQ=255) ggCAAGCCCTTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCtt < 2:177072/251‑1 (MQ=255) ggCAAGCCCTTTATTGTGATTAGCGTCGGGGATGCGCGAGGTATTCGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGGTAGCGCAAGGCGGGCCGGGCGTGCATATCACTTTACCCGAAGGGGACTGGCGGA‑GCAGAACCTGAAGCTGAATATTGCCCTGTCTTTTAGCGGTACCTGGGATCATTATGTGGTGACTGCCGGGCGTAATAGCGaaaagccctt > 1:138318/1‑243 (MQ=255) aGCCCTTTATTGGGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAAcc < 2:82346/251‑1 (MQ=255) ccctttAATGTGATTAGCGTCGTGGATGCGCGTGGTATTGGTTTGGTGAAAGCGCCTGAAGGTAACGGAACGGCTCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGTGACCGGCTATCTTTCGGTGGTGCCTGCCGGGCGTAAGAGCGAAATTACCTTAACCAg < 2:284805/248‑1 (MQ=255) gtgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGcc < 2:134438/251‑1 (MQ=255) cGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTTGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATccc > 1:274168/1‑250 (MQ=255) cGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGGAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGAACTTTATGAGGTGCCTTCCGGGCGGAATAGAGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGtt > 1:51566/1‑251 (MQ=255) ggTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAAAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGGGAttt > 1:28664/1‑251 (MQ=255) tATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAAACTGAAGCAGAAAATGGCCCGGGATTTAAGGGGGACCGGAGATCTTTCTGGGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGGCGCATCCCAGTTTTTTTGGAGAttttt > 1:200790/1‑250 (MQ=255) aTTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGAttttt < 2:105091/250‑2 (MQ=255) gtgtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGAttttt > 1:254876/1‑245 (MQ=255) gtgtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGAttttt < 2:254876/246‑2 (MQ=255) ggtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGAttttttgccag < 2:28664/250‑8 (MQ=255) gtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGc > 1:210857/1‑251 (MQ=255) gtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGCGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAAAACCTGAAGCAGAAAATGGACCTGAATTTAAGCGGTCCCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTCAAAGCGAAATGACCTTAACCAGGAACTGGCCGCATGCCAGGTTTTTAGGGGATTTTTTGCCAGc > 1:22394/1‑251 (MQ=255) gAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCCAACGGGAAGtt > 1:285231/1‑249 (MQ=255) tAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAg < 1:319578/250‑1 (MQ=255) acggaactgCGCCGACCATTGAACCCGGCCTCGGGTTTGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGTGACTGGCGTAATCAGAACCTGAAGCTGAATATGGCCCGGAATTTAAGCGGTGCCGTCGATCTTTCTGTGGGGCCTGCCGGGCGTAATGGCGAAAGGACCTTAACCAGCAACTGGGCGCATCCCAGTTTTTTGGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAggca < 2:284386/251‑4 (MQ=255) ggCGCTGACAATTGAACCCGGCACCGGGATAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCTAAATGACCTTAACCAGCAACTGGCCGAATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTc < 2:34728/251‑1 (MQ=255) cgcTGACCATTGAACCCGGCACCGGGCTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTc > 1:33660/1‑249 (MQ=255) gcTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAgg < 1:288207/251‑1 (MQ=255) gACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGgc < 1:4354/249‑1 (MQ=255) cACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCt < 1:103881/251‑1 (MQ=255) ccGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGATCCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTgg < 1:338871/251‑1 (MQ=255) gggCAGGGCGTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCgg > 1:98773/1‑251 (MQ=255) agggcggtcATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAg < 2:285231/243‑1 (MQ=255) aGGGCGTGCATATCACTTTACCCGAAGGGGACTGGCGGAAGCAGAAACTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGGGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCAGCATCCAAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGAGTCA‑TGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTg > 1:118254/1‑249 (MQ=255) gTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGGCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGcc < 1:101647/140‑1 (MQ=255) gTGCATATCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGttt < 1:24101/251‑1 (MQ=255) tGCATATCCCTTTACCCGAAGGGGACTGGCGGCAGCAGAACATGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGGGGTGCCTGCCGGGCGGACTAGCGAAATGGCCTTAACCAGCAACTGGGCGAATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCACACGGGAAGTTAGGGAGATC‑GGGTTTCAGGCG‑GAATGGGAAAGAAGCTGGTTTGCtattaaatccggtgggggtttt > 2:58897/1‑235 (MQ=255) gCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGCCGCATATGGACCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGGCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTg > 1:174892/1‑251 (MQ=255) atCCCTTTACCCGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTc > 1:390238/1‑251 (MQ=255) ccgAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATAAGGGCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGGGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCCGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGGGAGCGTTTTGCTTCAGGCAATGa > 1:377795/3‑250 (MQ=255) cgAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGAt > 1:283157/2‑250 (MQ=255) gAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGGATTTAAGCGGTACCGGCGATCTTTCTTTGGTGCCTGCCGGGCGGAATATCGAAATGACCTTAACCCGCAACTGGCCGCATCCCCGTTTTTTAGGAGATTTTTTGCCCGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGACG‑CAATAGCAACACCGCTGGTTTGCTAATAATCTCGGTGAGCGGTTTGCTTCAGGCAATgtga > 2:128913/1‑247 (MQ=255) ggACTGGCGGAAGCGGAACTTGAAGCTGAATATGGCCCTGAAATTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCTAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCt < 2:51116/251‑1 (MQ=255) acaaCCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGTCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTcctc < 2:200790/249‑3 (MQ=255) aGAACCTGAAGCTGAATATGGCCCTGAATTTACGCGGTACCGGCGATCTTTCTGTGGTGCCTGGCGGGCGTAATAGCGAAATGAACTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCATAGCAGCTGGTTTGCTAATAATCTCGATGAGCGATTTGCTTCAGGCAATGATAACGGCTGGGAAAACtttccc > 1:146923/1‑247 (MQ=255) gAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGGTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAAATTccccg > 1:406393/1‑249 (MQ=255) aCCTGAAACTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAAATGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAATTTTGTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCcgcg < 2:377795/251‑1 (MQ=255) gAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCCGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAACGCAGCTGGTTTGCTAATAATCTCTGTGGGCGGTTTGCTTCAGGCAATGATCCCGGCTGGGAAAAATTACCCGCGTTTAAGGTCGCAgagacaaccg > 1:269500/1‑242 (MQ=255) aTTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTGCAGGCAATGATACCGGCTGGGAAAACTTCCCCGCGGTTAGCGTCGCAGTGACGACGCCa < 1:378572/251‑1 (MQ=255) aaGCGGTCCCGGCGATCTTTCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCCGCGTTTAGCGTCGCAGTGACGACGCCAGcc < 2:283157/250‑1 (MQ=255) aGCGGTCCCGGCGATCTTGCTGTGGTGCCGGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTGTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCCGCGTTTAGCGTCGCAGTGACGACGCCAGCCGa < 2:445126/251‑1 (MQ=255) gttccGGCGATCTTTCTGGGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑GCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATTCCGGCTGGGAAAACTTCCCCGCGTTTAGCGTCGCAGTGACGACGCCAGCCGATCaa < 1:418483/248‑1 (MQ=255) ttCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCCGCGTTTTGCGTCGCCGTGACGCCGGCAGCCGGTCAAttcacattaa > 2:165486/1‑239 (MQ=255) ttCTGTGGTGCCTGCCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CAATGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCCGCGTTTAGCGTCGCAGTGACGACGCCAGCCGATCAATACCAATTaa < 1:165486/248‑1 (MQ=255) gggggCCTGCCGGGCGTAAAAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTTTGCCAGCCAAACGGGAAGTTAGCGAT‑TCAGGTTTTCAGGCG‑CAATGGAAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCCGCGTTTAGCGTCGCAGGGACGACGCCAGCCGAGCAATACCAATTAAcggtccgg < 2:367211/247‑8 (MQ=255) | TAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGGCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAG‑TCAGGTTTTCAGGCG‑CACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGG > NC_000913/4638590‑4639059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |