| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,637,037 | A→G | G114G (GGA→GGG) | creC → | sensory histidine kinase CreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,637,037 | 0 | A | G | 98.0% | 148.2 / ‑6.8 | 51 | G114G (GGA→GGG) | creC | sensory histidine kinase CreC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (27/23); minor base T (0/1); total (27/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01 | |||||||||||
CGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGTT > NC_000913/4636798‑4637270 | cGAAGAGCAACGGCGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGAGCAGGATTATTc > 1:384630/1‑251 (MQ=255) gcagagCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATCTCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGCTTCGCAGGGTAAAGTATT‑TTTCGATTCGGCAAATAAAGACGTTGGGCAGGattatttg > 2:291255/3‑249 (MQ=255) agCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGTGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCt < 2:99186/251‑1 (MQ=255) cAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTgg < 2:115332/251‑1 (MQ=255) gAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCGCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGa < 1:349822/251‑1 (MQ=255) acCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGc < 1:500954/250‑1 (MQ=255) gCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTgcgcgc > 1:503422/1‑250 (MQ=255) gcgcGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCAc < 1:103341/251‑1 (MQ=255) gATTTGCTCTCTGGGGACCCAACGCAAGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCaaa > 1:385606/1‑250 (MQ=255) ggCTCTCTGGGGACACAATGCATGGGCAAATGGCGCCGGCGTTTAATCAGCTACCACATCGCCCATTTCGCGCCCATATCGGTGGCATTAACAAAGTGCGCAATGAATCTCATGTCTATCTGACCGCTGCGCAGGGTAAAGAATA‑GTTCGATTCGGCAAATAAAGCCGATGGGCAGGATTATTCGCGCTGGACAGACTTCTGGCTAACGTTGCGTGGTCAGTATGGGGCGCGCGGAACGTTGCAAAATccc > 2:423398/2‑250 (MQ=255) gctttctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCt < 1:419354/246‑1 (MQ=255) ctctccGGGGAACCAACGCATGGGCAACTGGCGCAGGCGGTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACACAGTGCGCAATGAATATCATGTCTATATGACCGCTTAGCAGGGAAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGCATGACCTCTGGCTAACGTTGTGTGGTCAGTATGGTGCGCGGAGCCCGTTGCACAATCCTGc > 2:254724/1‑251 (MQ=255) acgctagggCAACTGGCGAAGGCGTTTAAGCAGCACCAACATCGCCCGTTTTGCGCCAATATCGGTGGCATTAACAAAGTGTGCAATGAATATCATGTCTATTTGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCATGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTc < 2:503422/245‑1 (MQ=255) gCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGCTTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTgc > 1:74144/1‑210 (MQ=255) gCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGCTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACAGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGACTGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTcgg > 1:203584/1‑249 (MQ=255) gCATGGGCAACTGGCGCAGGCGTTTAAGCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGTCCGATTCGCAGGGTAAAGTAGT‑GTTCGATTCGGCAAATAAAGCCGTGGGGCAGGAGTATGCGCGCTGGAATGACGTCTGGCTAACGGAGCGTGGTCAGTATGGTgc < 2:74144/210‑1 (MQ=255) cAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGc > 1:226304/1‑251 (MQ=255) ggCGTTTAATCAGCTACAACATCACCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGGGATGTTTGGTGCCGcgc > 2:335246/1‑249 (MQ=255) ttAATCAGCCACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAGGTGCGCAATGATTATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGAt < 2:188717/250‑1 (MQ=255) acaacaTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAACGTGCGCAATGACTATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCt > 2:44394/1‑137 (MQ=255) acaacaTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCt < 1:44394/137‑1 (MQ=255) aTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCgg < 1:160362/251‑1 (MQ=255) cGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTAtt > 1:339571/1‑251 (MQ=255) gTTTCGCGCCAATATCGGTGTCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGGGGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTg < 1:438027/251‑1 (MQ=255) gTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTg > 1:376046/1‑251 (MQ=255) cgcgCCAATATCGATGGCATTAACAAAGTGCGCAATGAATATCCTGTCTATATTACCGATTAGCAGGGTAAAGTATT‑GTTCGCTTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTAAGTATGGTGCGCGCAGCACGTTGCAAAATCATGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGGCGGCTCGCGGCTTATTGGCGt > 2:205046/1‑251 (MQ=255) cAATACCGGTGGCATTAACAAATTGCCCAATGAATATCAGTTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCGTGAATGACGTCGGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTGGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGa < 2:303880/251‑1 (MQ=255) atatCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGTAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGc < 1:448636/251‑1 (MQ=255) ggTGGCATTAACAAAGTGCGCAAGGAATATCATGTCTATATGACCGAGTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTTCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAgg < 1:259027/251‑1 (MQ=255) gTGGCATTAACAAAGTGCGCAATGCATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTCTGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGACAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGTCTCGCGGCTTATTGGCGTTTTGAGCGTAGGc > 2:465998/1‑251 (MQ=255) agaaaGTGCGTAAGGAATATAATTTCAATATGACCGTTTTGCAGGGTAAA‑TATTTGTACGATTCGGCAAAGAAAGCCGTTGGGCAGGATTATTCGCGTTGGAAGGACGATTGGCTAACGTTGCGTGGTCAGTATGTGGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAAc < 2:189281/249‑1 (MQ=255) aaGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAAcgcg > 1:506367/1‑251 (MQ=255) aaTGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGc > 1:365365/1‑251 (MQ=255) aggaaaataatgtccatagtcccGATTCGCAGGGTAAAGTTTT‑GTTCGATGCGGCAAATAAAGCCGTGGGGCAGGATTATTCGCGCTGGAATGACGTCGGGCTAACGTTGCGTGGTCAGTATGGGGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTGCGGTGATGTAGGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCt < 2:147952/230‑1 (MQ=255) tatCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTCGGCAAACCGAACCCGGCGATGGCTCCggg > 2:229977/1‑250 (MQ=255) atCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTc < 1:326001/251‑1 (MQ=255) tCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTaa < 2:142692/250‑1 (MQ=255) tCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTa > 1:208558/1‑249 (MQ=255) tatGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGt > 1:259985/1‑250 (MQ=255) ccgagtcgtagtgtaaaGTTTT‑GGTCTATTCGGCAAATAAAGCCGTTGGTGTGGATTATTCGCGCTTGAATCACTTCTTGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGTAAAATCCTTCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTagcgag < 2:485483/237‑1 (MQ=255) attcgcAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTagcgagagg > 2:213748/4‑248 (MQ=255) ccgggtaaaGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGGACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGact > 2:56931/7‑249 (MQ=255) ggtaaaGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGCTTATTCGCGCTGGAATTACGTCTGGCTCACGTTGCGTGAGCAGTTTGGTGAGCGCAGCACGTTGCAACATCCTGCCGATCCCGAACGTTCGGTGATGTATGTTGCCGCGCCGATTATGGCCGCCTCGAGGCTTATTGTCGTTTTGAGCGTAGGCACACCGAACGCGGCGCTGGATCCGGTCCTTGAGCGTAGCGTGCGGCGAAtttt > 2:205956/4‑251 (MQ=255) tATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCTCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCTATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAACCCGACCGCGGCGATGGGTCCGGTCATTAGGCGAAGCGGGCGGCGAATTTTATAGGcc > 2:56542/1‑251 (MQ=255) aTT‑GTTCGTTTCGGCAAATAAAGCCGTTGGGCAGGATTATTCTCGCTGGAATGACGTCTGGCTAACTTTGCGTTGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATTTTGCCGCGCCGATTATGGACTGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAGCCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGcc < 1:24079/250‑1 (MQ=255) gTTCGAGTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAgc < 1:453350/250‑1 (MQ=255) cGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCTCGCTGGAATGACGTCTGGATAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGACTCGCGGATTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGGTGGCTCCGGTCATTAAGCATCGCGAGCGGCGACTTTTATGGGCCAgcgca > 2:496245/1‑249 (MQ=255) gATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCAt > 1:268062/1‑251 (MQ=255) gATTCGGCAAATAAAGCCGTGGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCAt < 1:176107/251‑1 (MQ=255) aTTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCAtt < 1:463383/251‑1 (MQ=255) gCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTttgct > 1:251783/1‑249 (MQ=255) | CGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGTT > NC_000913/4636798‑4637270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |