| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,636,993 | G→T | A100S (GCG→TCG) | creC → | sensory histidine kinase CreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,636,993 | 0 | G | T | 98.1% | 162.8 / NA | 52 | A100S (GCG→TCG) | creC | sensory histidine kinase CreC |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (25/26); total (26/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
CAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGT > NC_000913/4636748‑4637232 | cggCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAg < 1:89134/249‑1 (MQ=255)cggCCTGGTTCGTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAg < 1:354579/249‑1 (MQ=255) tGGTTCGTAATGGCTATTTTTGTCAAAAAAGTTAACCCGGGCGTGCGAAGAGCAACGGAGGGGCCGTTAATCGCTAACGCAACGGTGCTGGCGGAGCTGGCGCGTCCAGATTTGATCTCTGGGGGCCCAACGCATGGGCCACTAGCGCCGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAATGCGCAATGAATAACATGTCTCTATGACCGATTCGCAgggta > 1:330334/1‑248 (MQ=255) gTACTGGCTATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCCGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATAACGGGGGCATTACCAAAGAGCGCAATGAATATCATGACTAAATGACCGATTCGCAGGGTAAAgaaat > 2:443184/1‑247 (MQ=255) taTTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATTTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGAtt > 2:463383/2‑251 (MQ=255) aTTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGAt < 1:358622/249‑1 (MQ=255) tttttGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCg > 1:152236/1‑251 (MQ=255) agTTAAACCGGGCGTGAGAAGAGCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTTTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCg < 2:377441/251‑1 (MQ=255) aaaCCGTGCGTGCGAAGAGCAACGGAGGGGACGGTAATCGAGGCCGCAGCGTTGCTGGCGGAGCTGGCGCGTCCCGAGTTGCTGTCTGGGTACCCAACGCAGGGGCAACTGGCGCAGGCGTGTAATCAGCTACAACATCGCCCGTTTCGCGCCAATGTCGGTGTCATTAACAAAGTTCGCAATGAATATCAGGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTg < 1:231990/250‑1 (MQ=255) cGAAGAGCAACGGCGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGAGCAGGATTATTc > 1:384630/1‑251 (MQ=255) gcagagCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATCTCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGCTTCGCAGGGTAAAGTATT‑TTTCGATTCGGCAAATAAAGACGTTGGGCAGGattatttg > 2:291255/3‑249 (MQ=255) agCAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGTGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCt < 2:99186/251‑1 (MQ=255) cAACGGAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTgg < 2:115332/251‑1 (MQ=255) gAGGGGACGTTAATCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCGCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGa < 1:349822/251‑1 (MQ=255) gttaaTCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGt > 1:98450/5‑216 (MQ=255) gttaaTCGATACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGt < 2:98450/212‑1 (MQ=255) acCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGc < 1:500954/250‑1 (MQ=255) ggcgCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTAtgg < 2:138609/163‑3 (MQ=255) ggAGCTGGCGCGTCCCGCTTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑g > 1:138609/1‑166 (MQ=255) gCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTgcgcgc > 1:503422/1‑250 (MQ=255) gcgcGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCAc < 1:103341/251‑1 (MQ=255) gATTTGCTCTCTGGGGACCCAACGCAAGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCaaa > 1:385606/1‑250 (MQ=255) ggCTCTCTGGGGACACAATGCATGGGCAAATGGCGCCGGCGTTTAATCAGCTACCACATCGCCCATTTCGCGCCCATATCGGTGGCATTAACAAAGTGCGCAATGAATCTCATGTCTATCTGACCGCTGCGCAGGGTAAAGAATA‑GTTCGATTCGGCAAATAAAGCCGATGGGCAGGATTATTCGCGCTGGACAGACTTCTGGCTAACGTTGCGTGGTCAGTATGGGGCGCGCGGAACGTTGCAAAATccc > 2:423398/2‑250 (MQ=255) gctttctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCt < 1:419354/246‑1 (MQ=255) ctctccGGGGAACCAACGCATGGGCAACTGGCGCAGGCGGTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACACAGTGCGCAATGAATATCATGTCTATATGACCGCTTAGCAGGGAAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGCATGACCTCTGGCTAACGTTGTGTGGTCAGTATGGTGCGCGGAGCCCGTTGCACAATCCTGc > 2:254724/1‑251 (MQ=255) acgctagggCAACTGGCGAAGGCGTTTAAGCAGCACCAACATCGCCCGTTTTGCGCCAATATCGGTGGCATTAACAAAGTGTGCAATGAATATCATGTCTATTTGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCATGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTc < 2:503422/245‑1 (MQ=255) gCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGCTTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTgc > 1:74144/1‑210 (MQ=255) gCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGCTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACAGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGACTGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTcgg > 1:203584/1‑249 (MQ=255) gCATGGGCAACTGGCGCAGGCGTTTAAGCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGTCCGATTCGCAGGGTAAAGTAGT‑GTTCGATTCGGCAAATAAAGCCGTGGGGCAGGAGTATGCGCGCTGGAATGACGTCTGGCTAACGGAGCGTGGTCAGTATGGTgc < 2:74144/210‑1 (MQ=255) cAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGc > 1:226304/1‑251 (MQ=255) ggCGTTTAATCAGCTACAACATCACCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGGGATGTTTGGTGCCGcgc > 2:335246/1‑249 (MQ=255) ttAATCAGCCACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAGGTGCGCAATGATTATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGAt < 2:188717/250‑1 (MQ=255) acaacaTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAACGTGCGCAATGACTATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCt > 2:44394/1‑137 (MQ=255) acaacaTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCt < 1:44394/137‑1 (MQ=255) aTCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCgg < 1:160362/251‑1 (MQ=255) cGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTAtt > 1:339571/1‑251 (MQ=255) gTTTCGCGCCAATATCGGTGTCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGGGGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTg < 1:438027/251‑1 (MQ=255) gTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTg > 1:376046/1‑251 (MQ=255) cgcgCCAATATCGATGGCATTAACAAAGTGCGCAATGAATATCCTGTCTATATTACCGATTAGCAGGGTAAAGTATT‑GTTCGCTTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTAAGTATGGTGCGCGCAGCACGTTGCAAAATCATGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGGCGGCTCGCGGCTTATTGGCGt > 2:205046/1‑251 (MQ=255) cAATACCGGTGGCATTAACAAATTGCCCAATGAATATCAGTTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCGTGAATGACGTCGGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTGGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGa < 2:303880/251‑1 (MQ=255) atatCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGTAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGc < 1:448636/251‑1 (MQ=255) ggTGGCATTAACAAAGTGCGCAAGGAATATCATGTCTATATGACCGAGTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTTCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAgg < 1:259027/251‑1 (MQ=255) gTGGCATTAACAAAGTGCGCAATGCATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTCTGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGACAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGTCTCGCGGCTTATTGGCGTTTTGAGCGTAGGc > 2:465998/1‑251 (MQ=255) agaaaGTGCGTAAGGAATATAATTTCAATATGACCGTTTTGCAGGGTAAA‑TATTTGTACGATTCGGCAAAGAAAGCCGTTGGGCAGGATTATTCGCGTTGGAAGGACGATTGGCTAACGTTGCGTGGTCAGTATGTGGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAAc < 2:189281/249‑1 (MQ=255) aaGTGCGCAATGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAAcgcg > 1:506367/1‑251 (MQ=255) aaTGAATATCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGc > 1:365365/1‑251 (MQ=255) aggaaaataatgtccatagtcccGATTCGCAGGGTAAAGTTTT‑GTTCGATGCGGCAAATAAAGCCGTGGGGCAGGATTATTCGCGCTGGAATGACGTCGGGCTAACGTTGCGTGGTCAGTATGGGGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTGCGGTGATGTAGGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCt < 2:147952/230‑1 (MQ=255) tatCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTCGGCAAACCGAACCCGGCGATGGCTCCggg > 2:229977/1‑250 (MQ=255) atCATGTCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTc < 1:326001/251‑1 (MQ=255) tCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTaa < 2:142692/250‑1 (MQ=255) tCTATATGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTa > 1:208558/1‑249 (MQ=255) tatGACCGATTCGCAGGGTAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGGCAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCGGTGATGTATGTTGCCGCGCCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGt > 1:259985/1‑250 (MQ=255) | CAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATT‑GTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGT > NC_000913/4636748‑4637232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |