Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,619,338 C→T R370R (CGC→CGT deoA → thymidine phosphorylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,619,3380CT97.1% 96.9 / NA 36R370R (CGC→CGTdeoAthymidine phosphorylase
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base T (13/20);  minor base G (1/0);  total (16/20)
Fisher's exact test for biased strand distribution p-value = 4.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCGACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGT  >  NC_000913/4619093‑4619555
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                           
cTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAAGCAGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGgtcgtcgtc                                                                                                                                                                                                                         >  1:205469/1‑250 (MQ=255)
     gAAAGATGACGCCGAAGCGCGCGCGAAATTGCAAGCAGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCAACCGGCTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCAt                                                                                                                                                                                                                   >  2:379803/1‑251 (MQ=255)
             aCGCCGAAGCGCGCGCGAACTTGCAAGCAGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCAACCGCCTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGCCGCAAGCCGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGCTGGCGGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGGATCTGACAcc                                                                                                                                                                                                           >  2:496009/1‑251 (MQ=255)
                            cgAAATTGCAAGCAGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTc                                                                                                                                                                                            >  2:479376/1‑251 (MQ=255)
                             gAAATTGCAAGCAGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCg                                                                                                                                                                                           <  1:228064/251‑1 (MQ=255)
                                aTTGCAAGCAGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCAAACGACTGCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCt                                                                                                                                                                                        <  2:372800/251‑1 (MQ=255)
                                     gcgcagTGCTGGACAACGGTCAAGCGGCGGAAGTCTTTGGTCGTATGGTAGCGGAACAACAAGGCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCAGACAGCGCTGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGTTCCCCGCGCGCTGGGGGTGGCAGTGGTTGCAATGGGCGGCGGTCGTCGGCAGGCCTCTGACCCCCTTGATTACaacggagcctttctt                                                                                                                                                                                   >  2:103888/6‑237 (MQ=255)
                                                    aCGGAAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAACAGGCACAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGATGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGTAATGGATACCCGCCCGCTGGGGATGGGAGTGTTTGCAATGGGGGGCGGTCGGCGTCGAGCATCTGACACCATTGATTACAGCGACGGCTTTACTGATATGGCGCGtttg                                                                                                                                                                    >  2:355067/1‑248 (MQ=255)
                                                        tAAAGCGGCCGAAGGCGTTGGTCGAATGGGAACGGCCCAAAAAGGCCCCACCGACTTCGTTGAGAACGCAGCGAAGTATCAGCAGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACACGCGCGATGGGGATGGCAGTGGTTGCCATGGGCGGCGGTCTACTTCCGGCATCTGCCACCATTGTTTACAGCGTCGGCGTTACTGCTATGGCGCGTTTggggg                                                                                                                                                                >  2:492891/1‑249 (MQ=255)
                                                                         ttGGCCGTCTGGTACCGGTACAAAAGTGCCCGACCGACTTCATGGAGACCTCCGCGAATCACCTGACGTCCGCCATGCTGACGAACGCAGTCTATGCTCATACCGAAGGTTTTGTCAGGGAATCGGTTACCCGCGCGCTGGGGATGGCAGTGGTTGCAAGGGGCGGCGGTCTTCGTCAGGCATCTGACGCCATTGATTACAGCGTCGGATTTACTGATATGGCGCGTTTGGGCGagcattgagccggtca                                                                                                                                                <  2:62730/250‑16 (MQ=255)
                                                                          tGGTCGTATGGTAGCGGCACAAAAAGGCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAg                                                                                                                                               <  1:274465/250‑1 (MQ=255)
                                                                                      aGCGGCACAAAAAGGCCCAACCGGCTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCg                                                                                                                                   <  1:379803/250‑1 (MQ=255)
                                                                                      aGCGGCACAAAAAGGCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGTCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCg                                                                                                                                   <  1:77781/250‑1 (MQ=255)
                                                                                         ggCACAAAAAGGCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTa                                                                                                                               <  1:19236/251‑1 (MQ=255)
                                                                                             caAAAAGGCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACACGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGGCGCCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCATTACTGATATGGCGCGTTTGGGCGGCGAGGTAGACGGGCAGCGTCCGCTGGCGGTTaaccc                                                                                                                           >  2:193677/1‑247 (MQ=255)
                                                                                                  aGGCCCAACCGACTTCGTTGCGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGAAACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGGCAGGCATCTGACACCATTGATTACAGCGGCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGGCAGCGTGCGCTGGGGGGTATctcaccgg                                                                                                                      >  2:47189/1‑244 (MQ=255)
                                                                                                   ggCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCAcgcgc                                                                                                                      >  1:476055/1‑249 (MQ=255)
                                                                                                   ggCCCAACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGGAGACGGTCAGCGTCCGCTGGCGGGTATCCAcgcgg                                                                                                                      >  2:437241/1‑249 (MQ=255)
                                                                                                       caaccgacTTCGTTGAGAACTACGCGAATTATCTGCCGACAGCGATGCGTACGAAAGCAGTCTATGCTGATACCGAATGTTTGGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTTCTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGAc                                                                                                                <  2:406831/249‑1 (MQ=255)
                                                                                                                   gtGAGAACTACGCGAAGTATCGGCCGACAGCGATGATGACGAAAGCAGTATATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGACAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGGCAGCGTCCGCTGGCGGTTATCCACGCTAAAGACGAAAACAGCTgg                                                                                                    <  2:434412/250‑1 (MQ=255)
                                                                                                                        aaCTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAgg                                                                                                >  1:214521/1‑250 (MQ=255)
                                                                                                                          cTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTTTCCCCCCGAAAGACGAAAAAAGCTGGCAGGa                                                                                               >  1:186712/1‑249 (MQ=255)
                                                                                                                            aCGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAg                                                                                             <  1:495334/249‑1 (MQ=255)
                                                                                                                            aCGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGGCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCGTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAgcg                                                                                           <  2:82640/251‑1 (MQ=255)
                                                                                                                                   gtttcgtcctgcagtgttGCTGACGAAAGCAGTCTAGGCTTATGCAGAATGTTGTGGCAGTGAAATGGAGACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGGGGCGGGCGTCGTCAGGCATCTTCCTCCAGTGATTTCAGCTGCTGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGGCCGCTGGCGGATATCCACGCGAAAGACTAAAACAGCTGGCAGGAAgcggcgcaa                                                                                     <  2:441375/233‑4 (MQ=255)
                                                                                                                                         gCCGACAGCGATGCGGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGt                                                                                <  1:350867/249‑1 (MQ=255)
                                                                                                                                                 agaggCTGACGAAAGCAGTTTCTGCTGAGACCGAAGGTTGTGGCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATGGATTACAGCGTCGGCTTTACTGAGATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGAAGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGCGACAGCGGCa                                                                     <  2:97849/247‑1 (MQ=255)
                                                                                                                                                    tGCTGAAGAAAGCAGTCTATGCTGAAACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGAAGTGGTTGCACTGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGGTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTGACCACGCGGAAAGCGAAAACAGCTGGGAGGGAGCGGCGGAGACGGGGAAAGCAGCAAtt                                                                  >  1:181723/1‑251 (MQ=255)
                                                                                                                                                         aCGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACt                                                             <  2:81775/251‑1 (MQ=255)
                                                                                                                                                                   tCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGATATCCAAGCGACAGCCCAAAACCACCGGCAGGCACCGGCGCAAGCGGGGAGAAGGGCAATTAAACTTTCCGAtca                                                    >  1:364682/1‑248 (MQ=255)
                                                                                                                                                                        gCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCAcc                                              <  1:437241/251‑1 (MQ=255)
                                                                                                                                                                               ccGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGGCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGc                                       <  1:502749/251‑1 (MQ=255)
                                                                                                                                                                                   agtttttGTCAGGGAAAAGGATACCCGCGCGCTGGGGAGGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCacac                                   <  2:366105/248‑1 (MQ=255)
                                                                                                                                                                                     ggtttGGCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCa                                 <  1:496009/249‑1 (MQ=255)
                                                                                                                                                                                          gTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTg                             <  1:199447/250‑1 (MQ=255)
                                                                                                                                                                                                  aaTGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGGTGTCCACCCGGAAGACGAAAAAAGCTGGGAGGAAAAGGCGAAAACGGGGAAAGGCGCAATTAAAATTTCCGATTAAACACCGGaaaagacacaaaattgctattccc                    >  1:503623/1‑230 (MQ=255)
                                                                                                                                                                                                                       gATGGCAGTGGTTGCAATGGGCGGCGGTCGTCGTCAGGCATCTGACACCATTGATTACAGCGTCGGCTTTACTGATATGGCGCGTTTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAGCTGGCAGGAAGCGGCGAAAGCGGGGAAAGCGGCAAATAAACTTGCCGATAAAGCACCGGAAAGCACACCAAATGTCTATCGCCGTATCAGCGAATAACggg  >  1:424322/1‑247 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                           
CTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCGACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGT  >  NC_000913/4619093‑4619555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: