| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,616,514 | T→G | S184S (TCA→TCC) | yjjI ← | DUF3029 domain‑containing protein YjjI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,616,514 | 0 | T | G | 94.3% | 158.9 / ‑0.6 | 53 | S184S (TCA→TCC) | yjjI | DUF3029 domain‑containing protein YjjI |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base G (31/19); total (33/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.87e-01 | |||||||||||
AGCGATTCGCTGCGCTCGGCAATGGCTTTCAGGTT‑AAGGCGTACCAGCGTGCTGCCACCACCCGCCAGCGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑CATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAA > NC_000913/4616275‑4616752 | aGCGATTCGCTGCGCACGGCAATGGCTTTCAGGTT‑AAGGCGTACCAGCGTGCTGCCACCACCCGCCAGCGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCtt > 1:177662/1‑251 (MQ=255) cTGCACTCGGAAATGGCTT‑CAGGTTTAAGGCGTACCTGCGTGCTTCCCATACCCGCCAGCGGCAGTGAGTTTTAACAGCTCACATTCCCGTAGCCCCCTGTTGTGAAAATTTTATCATGCACCGGACCGGTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGTTGTTTTCAGGATCGTAGATAAAGGTCAGGTTTGGGCAAAACTGCTTCACctct < 2:77674/249‑1 (MQ=255) cAATGGCTTTCAGGTT‑AAGGCGTACCAGCGTGCTGCCACCCCCCGCCAGCGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAAct < 1:409911/237‑1 (MQ=255) cAATGGCTTTCAGGTT‑AAGGCGTACCAGCGTGCTGCCACCACCCGCCAGCGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAAct > 2:409911/1‑237 (MQ=255) ggCTTTCAGGTT‑AAGGCGTACCAGCGTGCTGCCACCCCCAGCCAGCGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGTTGTGCGGTTTGCTACATTCACAGCTGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGCACGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTa > 2:484520/1‑248 (MQ=255) ggTT‑AAGGCGTACCAGCGTGCTGCCACCACCCGCCAGCGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGAGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGACACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCgg > 1:20335/1‑251 (MQ=255) gctcgcccgcaccCTCCAGCGGCAGTGAGTTGTATCAGCTCACTATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCTCCGGACCGTTGTCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCCTCATGGGTGATTTCAGGATCGTAGATAAAGGTCAGGGTCGGGGAAACCTGCTGCACCTCTGCGTCTGCACGTCAGATCGCTCGGGTCATTGGCGAATCAGAc < 2:202054/242‑1 (MQ=255) cGCCAGCGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGGCTGCCCGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTgg > 2:254799/1‑251 (MQ=255) ccAGCGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCg > 1:59677/1‑251 (MQ=255) cGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCa < 1:432551/251‑1 (MQ=255) cagtgcgatgaaaCAGCTGACAATAACGTAGCCCACTTTTGTGAAAATTTTCTCATGCACCGGACCGTTGGCGAGGCGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCCGCAGGTCATCAGGGGTGATTTCAGGATCGTAGCTAAAGGTCAGGTTCGGGGTAGCCTGCTTCAACCCTGCGTCTACACGTAAGAGCGTTCGGGTAATGGGCGAATCAGGCGGGACGCTATTGGCGTGcctac > 2:74965/12‑247 (MQ=255) cAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATa > 1:468914/1‑250 (MQ=255) gTTGTAACAGCTCACAATCGCGTAGACCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACCATCACAGATGTTCTTCGCCACTTCCGGCAGCAGGTCATCAGGGGAGATTTCAGGATCGTAGATAAAGGTCAGGTTCGTGGAAACATGCTTCAACTCTGCGTATGCACGTAAGATCGCGCGGGTAATGGGAGAATCAGACGGGCCGATGTTGAAGTGCGTAAAGGCGt > 1:305266/1‑251 (MQ=255) aGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGGTATTGGCGTGCCTAAAggagtagggaagg > 2:278977/1‑240 (MQ=255) gCTCACAATCCCGTAGCCCCTTTTTGGGAAAAGTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTCCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCTTCTGGCAggg < 1:375780/251‑1 (MQ=255) caATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTg > 2:137114/1‑251 (MQ=255) aaTCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGt > 1:158407/1‑251 (MQ=255) cccGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCg < 1:137114/250‑1 (MQ=255) cccGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGa < 1:405995/251‑1 (MQ=255) gCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAAc < 1:254799/251‑1 (MQ=255) cccccTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACg > 1:32178/1‑251 (MQ=255) ttttGTGAAAATTTTATCAGGCCCCGGCCCGTTGGCGATGTGCGGTTTTCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAg < 2:468914/250‑1 (MQ=255) aTTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTAt > 1:382142/1‑251 (MQ=255) cATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGaat > 1:69936/1‑249 (MQ=255) ccgctcttccgatcggCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCAGCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATc < 2:442584/237‑1 (MQ=255) cGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCAACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCCGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGACTAAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGAtct > 1:382196/1‑251 (MQ=255) cGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAgg < 1:81298/200‑1 (MQ=255) cGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAgg > 2:81298/1‑200 (MQ=255) ggCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTtgt < 1:184241/250‑1 (MQ=255) gCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATc > 1:442584/1‑236 (MQ=255) gCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGACACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTCGATAAAGGCCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTCAGACCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGAGTGCATAAAGGCGTCTGGAAGGGATCTGTCGAGGTAACGCCAGAAAAGTTTTATTCGAT‑TATAGATCTCGTCTtgcgt > 2:249630/1‑248 (MQ=255) gTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGTTCTCGTCTTGTGTTAGAATTCt > 1:490340/1‑250 (MQ=255) ttGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTATAAc > 1:92542/1‑251 (MQ=255) tACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATat > 2:258676/1‑250 (MQ=255) aTTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCGGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑CATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGt < 1:17273/251‑1 (MQ=255) cacaGAGGTTCTCCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCGGCGTCGGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTg < 1:501135/250‑1 (MQ=255) ccACTTCCGGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTCGATCATGGTCAGGTTCGGGGAACCCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCGGACGGGCCGATATTGGCGTGCATAAAGGAGTCTGGCAGGGTTCTGTCGAGGTGACGCCAGAAACGCTTTATTCGAA‑TATCGATCTAGTCTTGTGTTAGAACTCTAACTTCTAGTTGCAACAACGCAACCaat > 2:221948/1‑249 (MQ=255) aCTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑CATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGTTGCAACAACGCATCCAGTTg > 1:100435/1‑251 (MQ=255) aCTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCATCCAGTTg < 1:258676/251‑1 (MQ=255) cTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCATCCAGTTGc > 1:27454/1‑251 (MQ=255) ttCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAACGGCGTCTGGCAGGGTTCTGTCGCGGAAACGCCAGAAACGTTTTCTTCGAA‑TATCGATCTCGTCTTGAGTTAGAATTATAACATATGGTTGCAACAACGCATCCAGTTGcc > 1:310672/1‑251 (MQ=255) gcagcagGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCATCCAGTTGCCCCAgg < 1:124289/251‑1 (MQ=255) agttcatcaGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGAc < 1:66501/248‑1 (MQ=255) aggacatcaGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGAc < 1:344493/247‑1 (MQ=255) agGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGAc > 1:430984/1‑251 (MQ=255) ttCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCg > 1:230619/1‑251 (MQ=255) tCAGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCCTCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCg > 2:309527/1‑250 (MQ=255) aGGATCGTAGATAAAGGTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGGCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAAAAACGCATACAGTTGCCCCAGGTAACCCGGCATCGTTGTGACCgccg > 2:397570/1‑248 (MQ=255) ggATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGCCGGGCCGATCTTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACTGCAGAAACGTTTTATTCGAA‑CAGCGATCTCGTCTTGGGTTAGAATTCTAACATACTGTTGCAAAAACGCGTACAGTTGCCCCAGGGAGACCGGCATCGATATGACCGACgg > 2:131054/1‑251 (MQ=255) aaaGGTCAGGTTCGGGGAAACCTGCTTCTACTCTGCGTCTGCACGTAAGATCGCGCGGGGAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATTTGGTTGCGACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGGCCGACGGTACGtggtggg > 2:405577/1‑250 (MQ=255) aaaGGTCAGGTTCGGGGAAACCTGCTTCACCTCTGCGTCTGCACGTAAGATCGCGCGGGGAATGGGCGAATCAGACGGGCCGTTATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCTAGGTAACGCCAGAAACGTTTTATTCGAATCA‑CGATCTCGTCTTGTGTTAGAATTCTAACATTTGGTTGCTACTACGCATCCAGTTGCCCGAGGTAGACCGGAATAGGTGTGACCGCCGGTACGTgggggt > 2:405570/1‑251 (MQ=255) ggTCAGGTTCGGGGAAACCTGCTTCAACTCTGCGTCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTaaa < 1:346813/251‑1 (MQ=255) ggTCAGGTTCGAGGAAACCTACTACATCTCTGTGTTTGCACGTAAGACCGCGAGGGTAATGGGCGAACAAGACGGGCCGATATTTGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCATAAACGTTTTATTCGAA‑TATCGATCTCGTCTTGTGTTAGAATTCTAACATATGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTaaa < 2:13469/251‑1 (MQ=255) | AGCGATTCGCTGCGCTCGGCAATGGCTTTCAGGTT‑AAGGCGTACCAGCGTGCTGCCACCACCCGCCAGCGGCAGTGAGTTGTAACAGCTCACAATCCCGTAGCCCCCTTTTGTGAAAATTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAA‑CATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAA > NC_000913/4616275‑4616752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |