| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,591,974 | G→A | A106A (GCG→GCA) | tsr → | methyl‑accepting chemotaxis protein Tsr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,591,974 | 0 | G | A | 98.0% | 150.7 / NA | 50 | A106A (GCG→GCA) | tsr | methyl‑accepting chemotaxis protein Tsr |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (23/26); total (24/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGCGATAACAAT > NC_000913/4591729‑4592214 | ccAGGCGGTCTTGTCTATAATGCCGTAAAGAAGTACAAAGAAAATTTCGCGTTTTTACAAACCATTCGCCAGCAGCAATCCACGCTTAATTGCAGCTGGTTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTa < 2:459231/250‑1 (MQ=255) cAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTa < 1:102701/250‑1 (MQ=255) tCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGt > 1:16919/1‑251 (MQ=255) gTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGc < 1:348565/251‑1 (MQ=255) gTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGGTTTACAAACCATTCGCCAGCAGCAATCCACGCGGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGtt < 2:16919/249‑1 (MQ=255) ttAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGt > 1:128504/1‑251 (MQ=255) ccTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCcg > 1:177420/1‑251 (MQ=255) aaTGACAAAGAAAATTTCACTGGTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCagag < 2:383126/251‑1 (MQ=255) aTGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGc < 2:216649/251‑1 (MQ=255) cAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGcc > 1:381087/1‑228 (MQ=255) cAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGcc < 2:381087/228‑1 (MQ=255) aaaaGTAAATTTCACTTGTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCAccg < 2:97640/250‑1 (MQ=255) gAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACcgccgc > 1:188371/1‑251 (MQ=255) aaaTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCa > 2:459899/1‑242 (MQ=255) aaaTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCa < 1:459899/242‑1 (MQ=255) aaTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCcgcggg > 2:256015/1‑224 (MQ=255) aaTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTg < 1:256015/226‑1 (MQ=255) aTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAAACGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGGCAGAGACCCGCCGCAggg > 2:104006/1‑249 (MQ=255) ttCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCGGAATGGCCGCGGGGTCGGGTTGTTGCAGACGCGTAACACCCTCACCCGCGCGGGTACCCGCTACATGAGGGATCAGAAAAATATTGGTAGCGGTTCAACCGTGGCTGAGCTGATGCA‑GAGTGCCAGTATTCCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGTGTGGCCGCGTGACCCGCGTAAGAGCACCGCCGCAGCgg < 2:404226/250‑1 (MQ=255) aCTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCACGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑CAAACTGGGCAGATTACGACGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCagc > 1:47336/1‑250 (MQ=255) tGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGACTGGCAGCTGGGTCGCGTTGTTGAAGACGCGGAACACCCTCAACCGCGCGGGTATCCGCTTCATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGAACCGCGTCAGAGCACCGCCGACGCGGCag > 1:307473/1‑248 (MQ=255) gTTTTATAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCGGGGTCGCGTTGTTGCAGACGCGTACCCCCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTAAACCTTTTCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCCCCGCCGCAGCGGCagag < 2:128504/249‑1 (MQ=255) ttACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCa > 1:11978/1‑250 (MQ=255) aCAACCCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGAAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGAAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAAc < 1:52429/251‑1 (MQ=255) aCCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGACACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGAtacaacgca > 2:24350/1‑242 (MQ=255) ccATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAAt > 1:485162/1‑251 (MQ=255) gcgcaggaATACACGCTGATTGGCAGCTGGGTCGCGTTGGTGCAGACGCGTAACACCCTCAACCGCGAGGGAATCCGCTACATGTTGGATCAGAATAACATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGATGAAACAGGCGGAAACACAACTGGGCGGATTAAGAAGCCTTGCCGCGTGAACCGCGTCAGAGAACCGCAACAGGGGCCGAGATCAAACGCAATTACGat > 2:40486/3‑250 (MQ=255) aaTCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACGGGGCAGATTACGAAGCGTTGCCGCGTGACCTTCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATcac < 1:215499/251‑1 (MQ=255) aTCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTCCGATATTTATcac > 2:142926/1‑250 (MQ=255) cccgcgcttaagggCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCACCCGCGGGGGTTGCCGCTACATGATGGATCAGAAAAATATGGGGAGCGGTACAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTAAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACaa < 2:177420/239‑1 (MQ=255) ccACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCACACGTAATTACGATATTTATCACAAt > 1:320014/1‑251 (MQ=255) ggAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTATCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATAGTTATCACAATGCGCTg < 1:376899/250‑1 (MQ=255) ggCAGTTGGGTCGCGTTTTTGCAGACGCGTAACCCCCTCACCCGCCCGGGTACCCGCTACATGATGGATCAGAATATAATTGGTAGCGGTTCAACCGTGGCGGATCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAACCGGGGCAGATTACGAAGCTTTGCCGCGTGACCCGCTTCATAGCTCCGCCGCAGCGGCAGAGATCAAACGTATGTACGATATTTATCACAATGCGCTGGCGGa < 1:159754/251‑1 (MQ=255) gCAGCTGTGTCGCGTTGTTGCAGACGCTTAACACCCTAAACCGCGCGGTTATCCGCTACAGGATGGACCATAATAATAGTGGTAGCGGTTCAACCGTTGCTGAGCTGATGAA‑GAGTGCCAGTATTTCGCTGAAACAGGCGAAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGCCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAg < 1:274249/251‑1 (MQ=255) gTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACCTGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCCCCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATcc > 1:370718/1‑250 (MQ=255) cgcgcgGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCtt > 1:166110/1‑251 (MQ=255) ggcgggttccccctccatgaggaaTCAAAATATTATTGGTGGCGATTCAACCGTTGCGGATCTGATGCG‑GATTCCCAGTATTCCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCTTTGCCTCGTGTCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACGATTAGGTGCAGGCAAAATCAACGAGTTCTTTg < 2:249375/228‑1 (MQ=255) gcgGGTTTCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGGGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGa < 1:493244/251‑1 (MQ=255) atTGGTAGCGGTTCACCCGTTGCGGAGCTG‑TGGAAGGGGGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACGGGGCAGATTACGAAGCGTTGCGTCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCga < 2:135781/251‑1 (MQ=255) aGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGc > 1:136955/1‑250 (MQ=255) cGTTGCTGGGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACGGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTTATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCtt < 1:247056/251‑1 (MQ=255) ggctgaTGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAg < 1:411632/250‑1 (MQ=255) a‑gagTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGCCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGAt < 1:131974/251‑1 (MQ=255) tGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGc > 1:36683/1‑251 (MQ=255) ttCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGat > 1:176451/1‑250 (MQ=255) gCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCg < 1:134409/251‑1 (MQ=255) ggCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTcta < 1:309714/234‑3 (MQ=255) ggCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGGGGCTTACCTGGGGCAAAACGATCGGCTctc > 2:309714/1‑232 (MQ=255) ggAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGAt > 1:450426/1‑250 (MQ=255) gggCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCTATGATATCGCCGTCAGCGATAACAAt > 1:400388/1‑245 (MQ=255) | TCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGCGATAACAAT > NC_000913/4591729‑4592214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |