| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,591,930 | G→C | E92Q (GAG→CAG) | tsr → | methyl‑accepting chemotaxis protein Tsr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,591,930 | 0 | G | C | 97.9% | 143.2 / NA | 48 | E92Q (GAG→CAG) | tsr | methyl‑accepting chemotaxis protein Tsr |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base C (21/25); minor base A (0/1); total (21/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
GCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAG > NC_000913/4591685‑4592172 | gcctACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAAGGACAAAGAAAATTTCCCTGTTGTACAAACCATTCGCGAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACAACCTCAACCGCGCGGGTATCCGCTACATGATGGAGCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGt < 1:439635/248‑1 (MQ=255) ctgGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGGAGCGGGTCAACCGTTGCTGAGCTGATGCA‑GAGGGCCAGTAt > 2:376899/1‑251 (MQ=255) ggttttggccggttttggccTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATTCCCTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTGCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTAttt < 2:242501/251‑1 (MQ=255) ggTTTTGGCCGTTTTTGGTCGTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTAtt < 1:364333/250‑1 (MQ=255) ttttGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAg < 1:166013/250‑1 (MQ=255) cTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGc > 1:75260/1‑251 (MQ=255) ccAGGCGGTCTTGTCTATAATGCCGTAAAGAAGTACAAAGAAAATTTCGCGTTTTTACAAACCATTCGCCAGCAGCAATCCACGCTTAATTGCAGCTGGTTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTa < 2:459231/250‑1 (MQ=255) cAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTa < 1:102701/250‑1 (MQ=255) tCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGt > 1:16919/1‑251 (MQ=255) gTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGc < 1:348565/251‑1 (MQ=255) gTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGGTTTACAAACCATTCGCCAGCAGCAATCCACGCGGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGtt < 2:16919/249‑1 (MQ=255) ttAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGt > 1:128504/1‑251 (MQ=255) ccTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCcg > 1:177420/1‑251 (MQ=255) aaTGACAAAGAAAATTTCACTGGTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCagag < 2:383126/251‑1 (MQ=255) aTGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGc < 2:216649/251‑1 (MQ=255) cAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGcc < 2:381087/228‑1 (MQ=255) cAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGcc > 1:381087/1‑228 (MQ=255) aaaaGTAAATTTCACTTGTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCAccg < 2:97640/250‑1 (MQ=255) gAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACcgccgc > 1:188371/1‑251 (MQ=255) aaaTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCa > 2:459899/1‑242 (MQ=255) aaaTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCa < 1:459899/242‑1 (MQ=255) aaTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCcgcggg > 2:256015/1‑224 (MQ=255) aaTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTg < 1:256015/226‑1 (MQ=255) aTTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAAACGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGGCAGAGACCCGCCGCAggg > 2:104006/1‑249 (MQ=255) ttCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCGGAATGGCCGCGGGGTCGGGTTGTTGCAGACGCGTAACACCCTCACCCGCGCGGGTACCCGCTACATGAGGGATCAGAAAAATATTGGTAGCGGTTCAACCGTGGCTGAGCTGATGCA‑GAGTGCCAGTATTCCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGTGTGGCCGCGTGACCCGCGTAAGAGCACCGCCGCAGCgg < 2:404226/250‑1 (MQ=255) aCTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCACGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑CAAACTGGGCAGATTACGACGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCagc > 1:47336/1‑250 (MQ=255) tGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGACTGGCAGCTGGGTCGCGTTGTTGAAGACGCGGAACACCCTCAACCGCGCGGGTATCCGCTTCATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGAACCGCGTCAGAGCACCGCCGACGCGGCag > 1:307473/1‑248 (MQ=255) gTTTTATAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCGGGGTCGCGTTGTTGCAGACGCGTACCCCCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTAAACCTTTTCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCCCCGCCGCAGCGGCagag < 2:128504/249‑1 (MQ=255) ttACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCa > 1:11978/1‑250 (MQ=255) aCAACCCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGAAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGAAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAAc < 1:52429/251‑1 (MQ=255) aCCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGACACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGAtacaacgca > 2:24350/1‑242 (MQ=255) ccATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAAt > 1:485162/1‑251 (MQ=255) gcgcaggaATACACGCTGATTGGCAGCTGGGTCGCGTTGGTGCAGACGCGTAACACCCTCAACCGCGAGGGAATCCGCTACATGTTGGATCAGAATAACATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGATGAAACAGGCGGAAACACAACTGGGCGGATTAAGAAGCCTTGCCGCGTGAACCGCGTCAGAGAACCGCAACAGGGGCCGAGATCAAACGCAATTACGat > 2:40486/3‑250 (MQ=255) aaTCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACGGGGCAGATTACGAAGCGTTGCCGCGTGACCTTCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATcac < 1:215499/251‑1 (MQ=255) aTCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTCCGATATTTATcac > 2:142926/1‑250 (MQ=255) cccgcgcttaagggCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCACCCGCGGGGGTTGCCGCTACATGATGGATCAGAAAAATATGGGGAGCGGTACAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTAAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACaa < 2:177420/239‑1 (MQ=255) ccACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCACACGTAATTACGATATTTATCACAAt > 1:320014/1‑251 (MQ=255) ggAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTATCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATAGTTATCACAATGCGCTg < 1:376899/250‑1 (MQ=255) ggCAGTTGGGTCGCGTTTTTGCAGACGCGTAACCCCCTCACCCGCCCGGGTACCCGCTACATGATGGATCAGAATATAATTGGTAGCGGTTCAACCGTGGCGGATCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAACCGGGGCAGATTACGAAGCTTTGCCGCGTGACCCGCTTCATAGCTCCGCCGCAGCGGCAGAGATCAAACGTATGTACGATATTTATCACAATGCGCTGGCGGa < 1:159754/251‑1 (MQ=255) gCAGCTGTGTCGCGTTGTTGCAGACGCTTAACACCCTAAACCGCGCGGTTATCCGCTACAGGATGGACCATAATAATAGTGGTAGCGGTTCAACCGTTGCTGAGCTGATGAA‑GAGTGCCAGTATTTCGCTGAAACAGGCGAAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGCCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAg < 1:274249/251‑1 (MQ=255) gTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACCTGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCCCCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATcc > 1:370718/1‑250 (MQ=255) cgcgcgGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCtt > 1:166110/1‑251 (MQ=255) ggcgggttccccctccatgaggaaTCAAAATATTATTGGTGGCGATTCAACCGTTGCGGATCTGATGCG‑GATTCCCAGTATTCCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCTTTGCCTCGTGTCCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACGATTAGGTGCAGGCAAAATCAACGAGTTCTTTg < 2:249375/228‑1 (MQ=255) gcgGGTTTCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGGGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGa < 1:493244/251‑1 (MQ=255) atTGGTAGCGGTTCACCCGTTGCGGAGCTG‑TGGAAGGGGGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACGGGGCAGATTACGAAGCGTTGCGTCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCga < 2:135781/251‑1 (MQ=255) aGCGGTTCAACCGTTGCTGAGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGc > 1:136955/1‑250 (MQ=255) cGTTGCTGGGCTGATGCA‑GAGTGCCAGTATTTCGCTGAAACGGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTTATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCtt < 1:247056/251‑1 (MQ=255) ggctgaTGCA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCAGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTATTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAg < 1:411632/250‑1 (MQ=255) | GCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGA‑GAGTGCCAGTATTTCGCTGAAACAGGCGGAAA‑AAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAG > NC_000913/4591685‑4592172 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |