Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,489,016 C→T E350K (GAA→AAA)  yjgR ← DUF853 domain‑containing protein YjgR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,489,0160CT93.2% 123.2 / 0.7 44E350K (GAA→AAA) yjgRDUF853 domain‑containing protein YjgR
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base T (18/23);  total (20/24)
Fisher's exact test for biased strand distribution p-value = 5.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.47e-01

GCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGATTCCCGGTCCACCTCATCCTCATATTTGCCATACACCGGAGAGTGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTCGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCAGACGCCCACGCCTTTTGAGCGAATAAGCCTTATCACCTGCTCAATCTTATCCAGCAGTACCTGCGGGGCATCGTTAAACAGCAGAT  >  NC_000913/4488773‑4489258
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                  
gcccgggaCTGGCCTGAAACCCCTTTTGCAACATCTCTTAGGCGGATTCCCGGTCCACCTCATCCTCATATTTGCCATACACCGGAGAGTGATTAACCAAGCCATTACGCTCATCTTCCGCCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCGCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTAt                                                                                                                                                                                                                                               <  2:1104/242‑1 (MQ=255)
       aCTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGATTCCCGGTCCACCTCATCCTCATATTTGCCATACACCGGAGAGTGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCg                                                                                                                                                                                                                                      <  1:362267/251‑1 (MQ=255)
                     cTTTTTGCAACATCTCATAGGCGGATTCCCGGTCCACCTCATCCTCATATTTGCCATACACCGGAGAGTGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATg                                                                                                                                                                                                                        >  1:302002/1‑251 (MQ=255)
                            cAACATCTCATAGGCGGCTTCCCGGTCCACCTCATCCTCATATTTGCCATCCACCGGAGAGTGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCTCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTTCCCAAGTCCTGAATCGCCTTTTTGGTATCAAACGCCGGTTTGGCCCGCATGGTTTgcg                                                                                                                                                                                                                 >  2:162635/1‑251 (MQ=255)
                            cAACAGCTCATAGGCGGATTCCCGGTCCACCTCAGCCTCATATTTGCCATCCACCGGAGAGGAATTAATCAAGCCATTCCGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTgcg                                                                                                                                                                                                                 <  2:376396/251‑1 (MQ=255)
                                         gCGGATTCCCGGTCCACCTCATCCTCATATTTGCCATACACCGGAGAGTGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCAc                                                                                                                                                                                                    <  1:375923/251‑1 (MQ=255)
                                           ggATTCCCGGTCCACCTCATCCTCATATTTGACATACACCGGAGAGGGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTGCACTg                                                                                                                                                                                                  >  1:425881/1‑251 (MQ=255)
                                                ccctgTCCACCTCCTCCTCATAGTTTCCATGCACCGGATAATGATTAAGCAAGCCATTACGCTCATCATCCGGCACCGGCCCCATCCGCGAACAAGGCGCTAGCCCCATCGCACGCTCCCCCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCACCGCCTCGCCGGTGCCCAGTTCCTGAAGCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTTCGCCGCGGACTTCACTGCTTTc                                                                                                                                                                                             <  2:44021/247‑1 (MQ=255)
                                                 ccGGTCCACCTCATCCTCATATTTGCCATACACCGGAGAGTGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTCGGTATCAAACGcc                                                                                                                                                                                                                                       >  1:106752/1‑208 (MQ=255)
                                                 ccGGTCCACCTCATCCTCATATTTGCCATACACCGGAGAGTGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTCGGTATCAAACGcc                                                                                                                                                                                                                                       <  2:106752/208‑1 (MQ=255)
                                                      ccACCTCATCCTCATATTTGCCATACACCGGAGAGTGATTAATCAAGCCATTACGATCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCt                                                                                                                                                                                       >  1:196425/1‑251 (MQ=255)
                                                                        tGCCATACACCGGAGCGTGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGc                                                                                                                                                                     >  1:207747/1‑251 (MQ=255)
                                                                                     ggagTGATTAATCAAGCCATGACCCTCTTCTGCCGACACCGGCCTCATCCGCGAACAAGGCGCCATCACCATCGTAGGCTCCCCCACGGAAGGGCTTCCTTGCGCATCCAGATGAGAGATCAACGCCTCGCCGTTGCCCCATTCGTGATGCGCCTGTGTGGTATCAAACTCCGGATTGGCCCGCATGGTTTGCGCCGCTGCGTTCACTGCTTGCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGaa                                                                                                                                                        <  1:209608/250‑1 (MQ=255)
                                                                                            ttAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACACTACACCACAAAAGGGATTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCgggatcagcagagcacacgtct                                                                                                                                                 >  1:498131/1‑230 (MQ=255)
                                                                                              aaTCAAGCCATGACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTa                                                                                                                                                <  1:61076/250‑1 (MQ=255)
                                                                                                  aaGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCg                                                                                                                                             >  1:4980/1‑249 (MQ=255)
                                                                                                   aGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGc                                                                                                                                          >  2:174550/1‑251 (MQ=255)
                                                                                                   aGCCATTACGCTCATCTTCCGTCACCGGCCCCAGCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGc                                                                                                                                          <  1:290081/251‑1 (MQ=255)
                                                                                                    gCCATTACTCTCATCGTCTCTCACCGGCCCCATCCGCGAACAAGGCCCGATCTCCATCGCACGCTCCTCCTCAGAAGTGCTTCCTTGCGCATCCAGAAAAGAGATCAACGCCGCGCCGGTGCCCAGTGCCTGAATCGCCTCTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTCTCTGATCTTTTGGCGTAAAAGCCCTCAAAGTATGTTGATCGCGATTACCGAGCt                                                                                                                                         <  2:330787/251‑1 (MQ=255)
                                                                                                       aTTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGcc                                                                                                                                      >  1:154140/1‑251 (MQ=255)
                                                                                                          aCGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGCTTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAACGCATGTTGAACGCGATTACCGAGCTGCCCg                                                                                                                                    >  2:41240/1‑250 (MQ=255)
                                                                                                             cTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATTCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTCGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGc                                                                                                                                 >  1:120444/1‑250 (MQ=255)
                                                                                                                 cctccccttaCCGGCCCCATCCGCGAACAAGGCGCGTTCCCCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCACCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCTAGCTGCCCGAGCACAtt                                                                                                                            <  2:478041/242‑1 (MQ=255)
                                                                                                                   ttCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTAt                                                                                                                          >  1:311469/1‑251 (MQ=255)
                                                                                                                    tCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCCTCTCACGCTCCTCCACAGAAGGGCTTCCTTTCGCATCCATAAATGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTTGCCCGCATGGTTTGCGCCGCTGCCTTCACTGATTTCTGATCTTTTGGCGTAAAAGCTCGCAAAGCATGTTGAACGCGATTACCGAGCGGCCCGAGCACATTa                                                                                                                           <  2:214302/249‑1 (MQ=255)
                                                                                                                    tCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTAt                                                                                                                          <  1:41240/250‑1 (MQ=255)
                                                                                                                         cACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGaa                                                                                                                    <  2:382865/251‑1 (MQ=255)
                                                                                                                                cccATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATc                                                                                                                >  1:170633/1‑248 (MQ=255)
                                                                                                                                      cgcgAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCACCGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGtt                                                                                                       <  1:450411/251‑1 (MQ=255)
                                                                                                                                                           aTCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCAGACGcc                                                                                  <  2:256137/251‑1 (MQ=255)
                                                                                                                                                                      caccacAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCAGACGCCCACGCCTTTTg                                                                       <  1:87527/251‑1 (MQ=255)
                                                                                                                                                                                        ttgcGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCAGACGccc                                                                                 <  1:432152/220‑1 (MQ=255)
                                                                                                                                                                                         ttCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGACCCAGACGCCCACGCCTTTTGAGCGAATAAGCCTTATCa                                                     <  1:162635/250‑1 (MQ=255)
                                                                                                                                                                                            ccgatctgAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCAGACGCCCACGCCTTTTGAGCGAATAAGCCTTATCAcc                                                   <  1:303421/242‑1 (MQ=255)
                                                                                                                                                                                                 cAGAAAAGAGATCAACGCCTCGCCGGTGCCCCGTTCCTGACTCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTCCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCACAGCATGTTGAACGCGATTACCGAGCTGCCCGCGCACATTATCCGGAATATCAGTCGGGTTTTGCGAAACGAACCAGCCGCCCACGCCTTTTGAGCGAATAAGCCTTATCCCCTGCTCac                                            >  2:252098/1‑250 (MQ=255)
                                                                                                                                                                                                   gAAAAGAGATCAACGCATCGCCGGTGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCCGACGCCCACGCCTTTTGAGCGAATAAGCCTTATCAcc                                                   >  2:303421/1‑242 (MQ=255)
                                                                                                                                                                                                         ggaTCAAGGCCTCGCCGGCGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCGTTTGGCGTCAAAGCCCGCAAAGCATGTTGAACGCGCTTACCGCGATGACCGTGCACGTTATCAGGAATATCCGACAGGCTTGGCGAAACGAACCAAACGCCCACGCCTTTTGAGCGAACTAGCCTTATCACCTGATCAATCTTATcc                                    >  2:345171/2‑251 (MQ=255)
                                                                                                                                                                                                            tCAACGACTCGCCGGAGCCCAGTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTACAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGCAACGAACCAGCAGCCCACGCCTTTTGAGCGAATAAGCCTTATCACCTGCTCAATCTTATCcagc                                 >  2:316492/1‑251 (MQ=255)
                                                                                                                                                                                                                                 gTTCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTGGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAATCATGATGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGTAATATCAGACGGGTTTTGCGATACGAACCAGACGCCCACGCCTTTTGAGCGAATAAGCCTTATCACCTGCTCAATCTTACCCAGCAGTACCTGCGGGGCATCGTTa            <  2:366232/251‑1 (MQ=255)
                                                                                                                                                                                                                                  ttCCTGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCAGACGCCCACGCCTTTTGAGCGAATAAGCCTTATCACCTGCTCAATCTTATCCAGCAGTACCTGCGGGGCATCGTTa            >  2:259103/1‑250 (MQ=255)
                                                                                                                                                                                                                                      tGAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCAGAGCACATTATCCGGAATATCAGAAGGGTTTTGCGAAACGAACCAGACGCCCACGCCTTTTGAGCGACTAAGCCTTATCACCTGCTCAATCTTATCCAGCAGTACCTGCGGGGCATCGGTAAAc         >  1:31929/1‑249 (MQ=255)
                                                                                                                                                                                                                                       gAATCGCCTTTTTGGTATCAAACGCCGGATTGGCTCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCAGACGCCCACGCCTTTTGAGCGAATAAGCCTTATCACCTGCTCAATCTTATCCAGCAGTACCTGCGGGGCATCGTTAAAca        <  1:502247/249‑1 (MQ=255)
                                                                                                                                                                                                                                       gAATCGCCTTTTTGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGTGTTTTGCGAAACGAACCAGACGCCCACGCCTTTTGAGCGAATAAGCCTTATCACCTGCTCAATCTTATCCAGCAGTACCTGCGGGGCATCGTTAAAcag       <  2:423798/250‑1 (MQ=255)
                                                                                                                                                                                                                                           cGCCTTTTTGTTAGCAAACGCCGGATTGGCCCGCATGGTTTGCGTCGCTGCCTTTTCTGCTTGCGGATCTTTTGGCGTAAAAGCCCGCAAATCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCAGACGCCCACGCCGTTTGAGCGAATAAGCCTTATAACCTGCGCAATCTTATCCAGCAGTACCTGCGGGGCATCGTTAAACAGCAGAt  <  2:284636/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                  
GCTCGGTACTGGCCTGAAAGCCTTTTTGCAACATCTCATAGGCGGATTCCCGGTCCACCTCATCCTCATATTTGCCATACACCGGAGAGTGATTAATCAAGCCATTACGCTCATCTTCCGTCACCGGCCCCATCCGCGAACAAGGCGCGATCACCATCGCACGCTCCACCACAGAAGGGCTTCCTTTCGCATCCAGAAAAGAGATCAACGCCTCGCCGGTGCCCAGTTCCTGAATCGCCTTTTCGGTATCAAACGCCGGATTGGCCCGCATGGTTTGCGCCGCTGCCTTCACTGCTTTCTGATCTTTTGGCGTAAAAGCCCGCAAAGCATGTTGAACGCGATTACCGAGCTGCCCGAGCACATTATCCGGAATATCAGACGGGTTTTGCGAAACGAACCAGACGCCCACGCCTTTTGAGCGAATAAGCCTTATCACCTGCTCAATCTTATCCAGCAGTACCTGCGGGGCATCGTTAAACAGCAGAT  >  NC_000913/4488773‑4489258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: