| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,440,768 | G→A | L150L (CTG→TTG) | paeA ← | putative cadaverine/putrescine exporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,440,768 | 0 | G | A | 95.0% | 173.5 / ‑1.4 | 60 | L150L (CTG→TTG) | paeA | putative cadaverine/putrescine exporter |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base A (27/30); total (29/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.09e-01 | |||||||||||
CATCTTCGTGGAGATCAAACCAAATCACGTTTTCACGCGGTGTCATTGAAGACGGAACGGTACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAGCGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAGGCTGTGAAAAGCTGGAGAAAATGCCGCATCACCGACGATACCGCCGAGAATCG > NC_000913/4440525‑4441010 | ccttctcggggagacaaacccAAATCCCGTTTCCACGCGGTGCTATTAAAGACGGAACGGTACGGGATTCCAGCTAAAAGACGTTTTCAATC‑ACCTCGTGTTCCGGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTg < 2:343763/232‑1 (MQ=255) acccAAACCACTTTTTCACGCGGTGTCATTGAAGACGGAACGTTACGGGATTCCAGCACAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGaa < 1:413613/249‑1 (MQ=255) ccaaatccagtttccccggggTGTCATTGAAAAGGGACCGGTACGGACTTCCAGCTCAAAGACTTTTTCAATC‑AGCTCGTGTTCCTGTTCTCGTAACCCGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAgc < 2:459095/232‑1 (MQ=255) cAAATCACGTTTTCACGCGGTGTCATTGAAGACGGAACGGTACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAgcg > 1:145744/1‑251 (MQ=255) aaTCACGTTTTCACGCGGTGTCATTGAAGACGGAACGGTACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAgcgc > 1:277559/1‑250 (MQ=255) cgtttttcccgcggtgatttggAAGACGGAACGTTACGGGATTCTAGCACAAAGGCGGTTTCA‑TCTAGCTCTGGTTCCTGTTTACGTAACCCGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTGCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCgg < 2:421030/230‑1 (MQ=255) ccGTTTTCACGCGGTGTAAGTGAAGACGGAACGGTACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGGCATCTTTACGTACCATTGGCAGGTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAGCGGGGTGCA‑AACGTACAGGCAGAAGCGCATCgg < 1:332768/250‑1 (MQ=255) actttctCACGCGGTGTCATTGAAGACGAAACGGCACGGGCTTCCACCTCAAAGCCGTTTTCAATC‑AGCCTGTGTTCCTGTTGACGTAACCCGCCCGCCAGCGCACCGGCTTCCACTGCCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCgg < 1:193708/245‑1 (MQ=255) gcgGTGTCATTGAAGACGGAACGGTACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCACGCCAGCGCACCGGCTTCCACTACCGCGTAGATGACATCAGAAGTGATGTCATCTTTACGTACGATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AAAGTACAGGCAGAAGCGCATCGGGTTgatgat > 1:312981/1‑250 (MQ=255) aGACGGAACGGTACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCcac > 1:307432/1‑249 (MQ=255) aCGGAACGGTACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCt < 1:337343/251‑1 (MQ=255) cgaaaCGGTTCGGGATTCCAGCTCAAAGACTTTTTCAATC‑AGCTCGGGTTCCTGTTTACGTAACACCCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATTTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGTCAGAAGCGCATCGGTTTGATGATACGCAAAGCCACAGCtt < 1:131918/248‑1 (MQ=255) ggAACGGTACGGGTTCCCAGCCCAAAATCGTTTCCAACC‑AGCTCGTGTTCCTGTTTCCGTACCCCCCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTc < 2:349165/251‑1 (MQ=255) gAACGGTCCGGGATTCCAGCTCAAAGACGTTTTCAATC‑ATCTCGAGTTCCTGTTTACGTAACACGCCCCCCAGCGCACCGGCTTCCACTACCACGTAGATGCCCTCAAAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAATATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAAAGTGGT‑CACAACGTAAAGGCAGAAGCGAATCGGGTTGATGATCCGCAAAGCCACAGCGTCt > 1:290552/1‑251 (MQ=255) gTACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGACGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGAACCGAAAAGCCACAGCTTCTGgcg > 2:772/1‑250 (MQ=255) tACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTCACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGAACAGGCAGAAGCGCATCGGGTTGATGATACGCCAAGCCACAGCTTCTGgcgc > 1:104529/1‑250 (MQ=255) ccacgccaaacgccGTTTTCAACA‑AGCTCGTGGTCCTTTTTACTGAACACGCCCGCCAGCGCACCGGCTTCCACTGCCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAACCATAcc < 2:212060/238‑1 (MQ=255) gACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGACCGCCAGAGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGAACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGAGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGTTGAGACGCAAAGCAACGGCTTCTGGAGCACTTATACCgtggagtttcg > 2:86494/1‑241 (MQ=255) ccggttccaaccacctcggtttcgtGTTTACGGAACCCGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGGTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCgg < 2:19903/227‑1 (MQ=255) cAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCAACGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTaa < 1:82795/250‑1 (MQ=255) tgtTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACCGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAAc > 1:486596/1‑249 (MQ=255) ccTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAATCCACCGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATACGCAAACAGGAt > 2:248004/1‑250 (MQ=255) tGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATaa > 1:394726/1‑250 (MQ=255) tttACGTAACCCGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAAc < 2:31403/250‑1 (MQ=255) cGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGcc > 1:127116/1‑251 (MQ=255) cagtcacctacgccaggcaaCCGGCTTCCACTACCGCGTAGATGTCATAAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTACGGTCGCCAGGCCGTAGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTGTCGGGGTGAAAGCCGCAAACAGGACAATCATGCCa < 2:67322/232‑1 (MQ=255) cacGCCCGCCCGCGCACCGGCTTCCACTACCGCGTCGATGTCATCAGCAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAGCGGGGGGCA‑AACGTAAAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCACTCATACCGAGGCGTTTCGGGGTTAAATCCGCACACAGGATAAACATGCCAGTc > 2:239177/1‑250 (MQ=255) gccAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGAGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACg > 1:366715/1‑250 (MQ=255) ccAGCGCACCGGCTTCCCCTACCGGGTAGATGTCAGTAGAAGGGATTCCATCTTTACGTACCATTGGCAGTTTGAAAAGACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGAGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACCTGCCAGTCCCTAACgag < 2:401895/251‑1 (MQ=255) gCTTACACTACCACGTAGCTGTCATCAGAAGTGATGTCATCATAACGTACCATTGGCAGTTTAAAAATACGGAAGAATATGTTCGCCAGGCCGTTGAAGAACCACACCAAAGGGGGGAA‑AACGTACAAGCAGAATCGCATCGGGTTGAGGATACGCAAAGACAAAGCTTCTGGCACAACCATAACGATACTTTTCGGGGTTAAATCCGCAAACCGGATAAACATGCCAGTAACTAACgataatgcgagcat > 2:111660/1‑239 (MQ=255) ccgcTACCGCGTATATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAg < 1:386304/248‑1 (MQ=255) cccGCGTAGATGTCATCAGAAGTGAGTTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAg < 1:109484/250‑1 (MQ=255) cgcgTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGtt < 1:415172/251‑1 (MQ=255) cgTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCCAACAGGATAAACATGCCAGTCACTACCGCGAAAGAGAGAATAAAGCTCAGTTGc > 1:296282/1‑251 (MQ=255) gTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCt < 1:248004/251‑1 (MQ=255) gTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGACGATTATGTTCGCCAGGCCGTTGAAGAAACACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAGGCCACAGCTTCTGGCGCAATCACACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATTCCAGTCACTAACGAGAAAGAGAGAATCAAGCTCGGTTGCTCag > 1:496509/1‑248 (MQ=255) gTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACCCCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGa < 2:307432/251‑1 (MQ=255) gTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCg > 1:21779/1‑250 (MQ=255) gATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAGCGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTACCGGGAAAGAGAGCATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGAc > 2:14813/1‑250 (MQ=255) gATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGAc < 1:186988/250‑1 (MQ=255) cGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCCCTAACGAGAAAGAGAGCATa > 2:214489/1‑207 (MQ=255) cGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATa < 1:214489/207‑1 (MQ=255) ccATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGgaga > 2:262271/1‑246 (MQ=255) ccATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGgaga < 1:262271/246‑1 (MQ=255) ccATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAgg < 1:448809/251‑1 (MQ=255) gCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTa < 1:3441/180‑1 (MQ=255) gCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTa > 2:3441/1‑180 (MQ=255) gCAGTTTGAAAATACGGAAGATGATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAGGCTGTGa < 1:136216/251‑1 (MQ=255) gTTTGAAAATACGGAAGATTATGTTCGCAAGGCCGTTGAAGAACCAAAACAACGAGATGCC‑AACGAACAGGAAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGGGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAGGCTGTGaaa > 1:299559/1‑250 (MQ=255) tttGAAAAAACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGCGCA‑AACTTACAGGCAGCAGCGCATCGGGTTGATGAAACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGACCGTCACTAACGAGAAAGAGAGACTAAAGCTCAGTTGCTCAGAGAGCTCTGCCGCCATGTAGAGGGAGAACAGGCTGTGaaa > 2:259319/1‑249 (MQ=255) aaaaTACTGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCGGGCGCAATCAGACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGAGAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCGCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAGGCTGTGAAAAGCTgg < 2:305965/251‑1 (MQ=255) aactccGGAAGATTAGGTTCGCCAGGCCGTGGAAGAACCACCCCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAACCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATATCCATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCGCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGTGAACAGGCTGTGAAAAGCTGga < 2:93762/246‑1 (MQ=255) gAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAAAATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGTACGGGCTGTGAAAAGCTGGAGAAAAtt > 2:337198/1‑250 (MQ=255) aaGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAAAACAGGATGTGAAAAGCTGGAGAAAATGc > 2:172418/1‑251 (MQ=255) aaGATGATGTTCGCCAGGCCGTAGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAGGCTGTGAAAAGCTGGAGAAAATGc < 2:104469/251‑1 (MQ=255) aGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCa > 2:105921/1‑155 (MQ=255) aGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCa < 1:105921/155‑1 (MQ=255) aTGTTCGCCAGGCCGTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAGGCTGTGAAAAGCTGGAGAAAATGCCGCAt < 1:301567/250‑1 (MQ=255) gTTGAAGAACCACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAGGCTGTGAAAAGCTGGAGAAAATGCCGCATCACCGACGATAccgc > 1:121516/1‑251 (MQ=255) ccACACCAACGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAGGCTGTGAAAAGCTGGAGAAAATGCCGCATCACCGACGATACCGCCGCGAATCg > 1:502389/1‑251 (MQ=255) | CATCTTCGTGGAGATCAAACCAAATCACGTTTTCACGCGGTGTCATTGAAGACGGAACGGTACGGGATTCCAGCTCAAAGACGTTTTCAATC‑AGCTCGTGTTCCTGTTTACGTAACACGCCCGCCAGCGCACCGGCTTCCACTACCGCGTAGATGTCATCAGAAGTGATGTCATCTTTACGTACCATTGGCAGTTTGAAAATACGGAAGATTATGTTCGCCAGGCCGTTGAAGAACCACACCAGCGGGGTGCA‑AACGTACAGGCAGAAGCGCATCGGGTTGATGATACGCAAAGCCACAGCTTCTGGCGCAATCATACCGATGCGTTTCGGGGTTAAATCCGCAAACAGGATAAACATGCCAGTCACTAACGAGAAAGAGAGAATAAAGCTCAGTTGCTCAGAGAGCTCTGCCGACATATAGCGGGAGAACAGGCTGTGAAAAGCTGGAGAAAATGCCGCATCACCGACGATACCGCCGAGAATCG > NC_000913/4440525‑4441010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |