| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,322,786 | G→A | intergenic (‑364/+550) | phnF ← / ← phnD | putative transcriptional regulator PhnF/phosphonate/phosphate ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,322,786 | 0 | G | A | 96.7% | 175.2 / NA | 61 | intergenic (‑364/+550) | phnF/phnD | putative transcriptional regulator PhnF/phosphonate/phosphate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (30/28); minor base C (1/1); total (31/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCA‑TCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCGATTTGCAGCGTGAC > NC_000913/4322541‑4323020 | aaCCGCGAACTGCTCCCCACAGGGAGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGatggtg < 1:63148/251‑1 (MQ=255) cgatccggctccctctggtgggcGCCGTTCCCGTCTGCGCCGACTAGGCCGACGACGGTCGCCGAGCGGCCGTTGGATTCGAAGCGATAGAGGGAGTAGGAGAGCTGCAGTGGCATCACCTGTGGCGGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCCCCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGAt < 2:397085/229‑1 (MQ=255) aTCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATaa > 1:197077/1‑250 (MQ=255) aTCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACATGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCCCCGGGCCGGGCTCAATCGCTTCCCCCGCTTCGGAAAGCAGCATGGGGAGCACGCCGATGGGGTGGaaaa > 2:496667/1‑247 (MQ=255) ccGCTTCCCTCAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAAc < 1:277163/250‑1 (MQ=255) cGCTACCCACAGGGTAACGCCGGTCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGGTGGATTCGAAGCGATAGAGGGAGTAGGAGAGCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGATCACGCCGATGGTGTGGATAAAc < 1:47347/250‑1 (MQ=255) cTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGCTTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGCTGGTGTGGATCAACAgc > 2:339843/1‑251 (MQ=255) cccACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGcgcc > 1:228119/1‑251 (MQ=255) ccaccgggggagcgcgtaccacGCCTGCGCCGACCAGGCCGACGACGGGCGCCGCGGGGACGGTGGATACGAAGCGATAGAGGGAGTAGGAGATCGGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGAGCGCTTCGAGCTTGTGGGCCCCGGTGGCGCGAATGCCTCCCACCGGGCCGGGCTCAATCGCTTCCACCGCTACGGAAAGCCGCTTGGAGAGCACGCCGATGGTTTGGATAACCAGcgcc < 2:39964/230‑1 (MQ=255) ccaaaggggtgcggcggtgcccGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGCCGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGcgcc < 2:176424/232‑1 (MQ=255) aGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGCGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGCGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGCGTGGATAAACAGcgccagcac > 2:111768/1‑251 (MQ=255) ggccgccaactccGCCTGCGCCGACCCTGCCGACGACTGTCGCCGAGCGTACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGAGCAGGAGTGGCATCACCGGTGGCAGCACGCCGTAGAGGAGCTCGTCGATCTTGGTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGAGCTCAATCGCTGCCCCCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGcgccagcacgcca < 2:104412/240‑1 (MQ=255) gATCCCGCCTGCGCCGAACATGCCGACGACGGTCGCAGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGAAGCACGCAGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGACTGCCTTACACCGGGCAGGGCTCAATCGCTTAAACCGCTTCGGCAAGCAGCTTGGCGAGCACGCCGATGGTGTGGATAAACAGCGCCagaccgcccgcacgcc > 1:496988/1‑251 (MQ=255) tCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCagcacgccagcacgcc > 1:428575/1‑249 (MQ=255) tGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACgg > 1:369592/1‑251 (MQ=255) aCCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGggccgagg > 1:485389/1‑251 (MQ=255) gCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCAGAGGCCGAc > 1:232182/1‑251 (MQ=255) ggTCGCCGAGCGGGCGTTGGATTCGAAGCGATAGAGGGAGTAGGAGAGCAGCAGGGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCAc < 2:68200/251‑1 (MQ=255) cccGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCTCCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGAGAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGTCGACGGCGACCACGAAc < 1:173350/250‑1 (MQ=255) cGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAAc > 2:373607/1‑222 (MQ=255) cGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAAc < 1:373607/222‑1 (MQ=255) gAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGc < 1:371015/251‑1 (MQ=255) gggACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGAGCAGCAGTGGCATCACCTGTGGCAGCACGCCGGAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATg < 2:239528/250‑1 (MQ=255) ggACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCCCGAACAGCATgg > 2:93113/1‑251 (MQ=255) ggACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGGGGATAAACAGCGCCAGAAAGCCAGCAACCCAGCGACCGGGCCGGGGCCGACGGGCACAACGAACAACAttg > 2:346945/1‑249 (MQ=255) cGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCCCGCCAGCGAACGGGCCGCGGCCGACGGCGACCACGCACAGCATCGCGAAGACCAttt > 2:157090/1‑251 (MQ=255) cGAAGCGAGAGAGGGAGTAGGAGATCAGCAGTGGCATCCCCTGGGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCAttt < 2:441288/251‑1 (MQ=255) cGAACCGATAGAGGGAGTGGGAGCTCAGTAGGGGCAACACTTGTGGCAGCCTGCCTTAGATGATTGCTCCGAGGTTGTTGGCACCGGTGGCGAGAATGCTTTCCGCCGGGCAGGGCTCAATCGCTTCACCCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTTAGGATAAACAGCGCAAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCAtt < 2:114136/250‑1 (MQ=255) gtaGTAGGAGATCAGCAGTGGCATCCCCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCCCCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAACCGCTTCCACCGTTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGcgcg < 2:289027/249‑1 (MQ=255) gagaTCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCg < 1:198616/251‑1 (MQ=255) gatcagacgtgtcatgtccgggggCAGCACGCCGGAGAGGATCTCGTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCGCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGGGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGTCCGAGGCCGACGGGGACCTCGAACAGCATGGCGATGACCATTACGTTAATGGCGCGGGAGGCGTc < 2:59654/229‑1 (MQ=255) tGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACCGCGACCCCGCACAGCATGCCGACGACCATTTCGTTAAGGGggcggccgcgcggcctacggcc > 2:177115/1‑235 (MQ=255) ggCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAggcgg > 1:152393/1‑251 (MQ=255) gcagcccttgtgGCAGCCCGGCGTATAGGCTCGCTCCGAGCTTGTTGGCCCCGGTGGCGCGAATGCCTTCTTCCGGGCCGGGTGCAATCGCTTCCCCCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGAATGTGTGGATAAACAGCGCCAGCACGGCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCAGGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCTTCCATCAggcggc < 2:314895/243‑1 (MQ=255) cATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGgcggcg < 1:97079/251‑1 (MQ=255) gtcagtaagacGTATAGGATCTTGTCGAGCTCGTTGGCTACGGGGGCGCGAATGCCGTCCACCGGGCCGGGTTCAATCGCTCCCCCCGATTCGGAAACCAGCGTGGAGAGCACGTCGTGGGGGTGGATAAACAGCGCCAGCAAGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTgg < 2:333868/241‑1 (MQ=255) ggCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAAAAGCGCCAGCACGCCCGCACGCCAGCGAACGGGCCGGGGCCGAAGGAGACCACGAACAGCATGGCGAAGACCAATTCGTTAAAGGCGCGGCCGGCGTCCCTCAggcggagggcgggccgg > 2:321753/1‑239 (MQ=255) caCGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTGCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAAc < 1:338909/251‑1 (MQ=255) gCCGTAGAGGATCTCGTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACcca < 1:463395/251‑1 (MQ=255) aTCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCCGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCCCA‑AC‑GGCAcc > 2:89072/1‑251 (MQ=255) ctTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCa < 1:97740/248‑1 (MQ=255) gAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCCGGCGTCCATCAGGCGGCGAACCGGCTGGGAAACCCACC‑AC‑GGCACCCGGGTTTc > 2:106436/1‑251 (MQ=255) aGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGGTTTCg > 1:137639/1‑251 (MQ=255) gttgGCTCCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCGCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCt < 2:446455/251‑1 (MQ=255) gttgGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGgcgcc > 1:359466/1‑250 (MQ=255) ggcgccGGTGGCGCGAATGCCTTCCACCGGGCCGGGCGCAATCGCTTCCACCGCTTCGGAAAGCGGTTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCtca‑t < 2:135733/247‑1 (MQ=255) cACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCtca‑tca < 1:96674/251‑1 (MQ=255) gTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCA‑TCATGcc > 1:193225/1‑250 (MQ=255) gAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCCCGCCCGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCCTCCGGCGGCGAACGGGCTGGTAAACCCACCCAT‑GG‑ACCAGGTTTTCGGGGCTCA‑TCCGGCCAAAggggg > 2:283003/1‑250 (MQ=255) gAATGCCTTCCACCGGGCCGGACTCAATCGCTTCCACCGCTTCGGAACGCAGCTTGGAGCGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACAATTTCGGTCATGGCGCGGCAGGCGCACATCAGGCGGCCACCGGGCTGGTAAGCCCCCC‑ACACGC‑CCAGGTTTTCCGCGCtcctccagctcaaggggg > 2:259295/1‑235 (MQ=255) tGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGGACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCC‑TCAGGCCAAAGGGGATgg > 1:89692/1‑251 (MQ=255) gCCTTCCACCGGGCCGGGGTCAAACGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCA‑TCAGGCCAAAGGGGATgg < 1:34864/250‑1 (MQ=255) ccTTCCCCCGGGCCGGGCTCACACTCTTCCTCCGCTTCGGAAAGCGGCTTGGATAGCACGCCTCGGGTGGGGAGAAACAGCGCCAGCCCGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGGTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑CC‑GGCACCAGGTTTTCGGCGCTCA‑TCAGGCCAAAGGGGATGgag < 2:238023/251‑1 (MQ=255) cTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGACGACCATTTCGTTAATGGCGCGGCCGGCGTCCATCCGGCGGCGAACGGGCTGGTAAACCCACC‑CC‑CGCACCCGGGTTTTGGCGCCCA‑CCCGGCCAAAGGGGATGgagg > 2:62010/1‑250 (MQ=255) ccgggccgggCGCAATCGCTGCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCA‑TCAGGCCAAAGGGGATGGAGAGAacca < 2:443152/251‑1 (MQ=255) gggccgggcTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCA‑TCAGGCCAAAGGGGATGGAGAGAaccacc > 1:413436/1‑251 (MQ=255) cgggcTCACTCGCTGCCCCCCGTTCGGAAAGCGGCTGGGAGAGCACGCCGAGGGGGGGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCAGGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCCCCAGGTTTTCGGCGCTCA‑TCAGGCCAAAGGGGATGGAGAGAACCACCGCCa < 2:152393/251‑1 (MQ=255) gggcTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCAAGCCAGCACGCAAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCAACAGGCGGGGGAAGGGCTGGAAAACCCACC‑CC‑TGCACCAGGTTTTCGGCG‑TCAATCCGGCCCAAGGGGCAGGTGAGAACCACCGcccg > 2:116002/1‑249 (MQ=255) aaTCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGGAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCA‑TCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCggg > 1:168564/1‑250 (MQ=255) cACCGCTGCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCA‑TCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGAc < 1:157090/251‑1 (MQ=255) cTTCGGAAAGCAGCTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCC‑TCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCg > 1:451674/1‑250 (MQ=255) cTTGGAGAGCACGCCGATGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGAAGGAGTCCATCAAGCGGCGAACGGGCTGGGAAACCCAAC‑AC‑GGCACCAGGTTATCGGAGATCA‑TAAGGCCAAAGGGGATGGAGAGAACCACCGCCAACGCGGAGACCCAGACGGCGATTTGCAGCGTGAc > 1:365594/1‑251 (MQ=255) | AACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGCGACCACGAACAGCATGGCGAAGACCATTTCGTTAATGGCGCGGCAGGCGTCCATCAGGCGGCGAACGGGCTGGTAAACCCACC‑AC‑GGCACCAGGTTTTCGGCGCTCA‑TCAGGCCAAAGGGGATGGAGAGAACCACCGCCAGCGCGGTGCCCCAGACGGCGATTTGCAGCGTGAC > NC_000913/4322541‑4323020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |