| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,320,344 | G→A | A107V (GCC→GTC) | phnI ← | carbon‑phosphorus lyase core complex subunit PhnI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,320,344 | 0 | G | A | 95.6% | 183.7 / NA | 70 | A107V (GCC→GTC) | phnI | carbon‑phosphorus lyase core complex subunit PhnI |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base A (41/24); minor base C (1/2); total (43/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGGGGTAAACCGGCGGCGTGCGGGTGATGTCATCCGGCTGTGCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGGCGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGGTGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAGCTGCTGTTCAATCTGGGCGACGCTCAGTTCGGGCAAATCGGTATCGCCTCG > NC_000913/4320104‑4320594 | cAGGGGTAAACCGGCGGCGTGCGGGTGATGTCATCCGGCTGTGCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGg‑agctc > 1:333733/1‑246 (MQ=255) ggTAAACCGGCGGCGTGCGGGTGATGTCATCCGGCTGTGCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGGAAAATCGAGCAGGCGATGGGGGTCGTCGTAGGTTGGGCCAAGCAGCTGGGCGCCGGGGATGTCTTGATAAACGACGg‑agaactcgggg > 2:392656/1‑243 (MQ=255) ggcggcGTGCGGGTGATGTCATCCGGCTGTGCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCCGGGGAAAATCGAGCAGGCGGTGGGGGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTTTAAACGACGG‑AGATACGGCGttggggacg > 1:29904/1‑244 (MQ=255) gggggtggcggtggaggTCATCCGGCTGGGGGCCGTTATCCTCTTCAAACGTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGGTGGCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGTAATGGCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGc < 2:256585/235‑1 (MQ=255) cgTGCGGGTGATGTCATCCGGCTGTGCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGGAAAATCGGGCAGGCGATGGGTGTAGTCGTAGGGTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATcc > 1:205002/1‑251 (MQ=255) gggctggggATGGCATCCGGCTGGGCGCTGCTACCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATccc < 2:57881/243‑1 (MQ=255) ggcgggttaggccATCCGGCTGTGCGCCGCTATCCTCGTCAATCTTCGCCAGCCCCGGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCg < 2:142519/239‑1 (MQ=255) gATGTCATCCGGCTGTGCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGGGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGgtg‑t > 1:323333/1‑251 (MQ=255) gATGTCACCCGGCTGGGCGCCCCTATCATCTTAAACCTTCCCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGgtg‑t < 2:346676/251‑1 (MQ=255) aTCCGGCTGTGCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGGAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCg > 1:429627/1‑251 (MQ=255) cGGCTGTGGGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACTTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCt < 1:157139/251‑1 (MQ=255) ggCTGTGCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGGAAAATCGAGCAGGCGATGGGGGGAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGGAAGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGGCGCATCCCGGTGGTG‑Tcaggcggccc > 1:18133/1‑242 (MQ=255) tgtgCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGCCGGCTGCTGTTCGCTGTCGGCGGGGGTCAGCGGCGGCGCTTCGCCGTTTGCCCGCCGGGGAAAATCGAGCAGGCGGTGGGGGTAGTCGGTGGTTGGGCCCAGCAGCTGGCCGCCGGGGATGTCTTTATAAACGACGG‑GGATACCGCGGTC‑GAGACGCATCCCGGTGGTG‑GCGGGCGGCCCGCt > 2:325778/1‑251 (MQ=255) tATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGGTGGGGGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGc > 1:56985/1‑251 (MQ=255) ccTCTTCAAACTCCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGCCGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTc < 2:346290/251‑1 (MQ=255) ctctTCACACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCCTTTGCCAGCAAGGTAAAATCGAGCAGGCGATGGGTGTAGTCGGAGGGTGGGGCAAGCCGCTGGCCGCCGGGACTGTCTTTTTACACGACGG‑AGATACGGCGTTC‑GAGCCGAATCCCCGTGGTG‑GCGAGCGGccccccttcctccgcgttgt > 2:496911/1‑232 (MQ=255) ctTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGGTGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGGCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGcc > 1:211134/1‑251 (MQ=255) aaaCTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACg > 1:313394/1‑251 (MQ=255) aaCTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGC‑AGCAGGGGAAAATCGAGCAGGCGGTGGGGGTAGTCGTCGGTTGGGCCAAGCCGCTTGACGCCGGGAAAGTCTTTATAAACGACGG‑AGATACGGCGGTC‑GAGACGCAGCCCGG‑GGTGGTCGAGGGGGTCGCTTGCCGCCACC‑GTCGcccagcgg > 2:413574/1‑245 (MQ=255) ccccAGCCCCTGACGCGCCAGCAGGCTGAAAGCGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGAGGCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACCACGG‑AGATACGGCTTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGc < 1:334559/249‑1 (MQ=255) ccccTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACTGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGTTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCTTGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAgg < 1:104918/251‑1 (MQ=255) cagcagGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAACAgg > 1:335974/1‑250 (MQ=255) agGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCCGCAGGGTAAAATCAAGCAGGCGATGGGGGTAGTCGTAGGTTGGGGCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGGTACGGCGTTC‑GAGTCGCATCCCGGTGGTG‑TCGGGCGGCCCGCTTACCGCCCGC‑TTCGCCAACGTGATGCGGTAGGGGCGCAGCAGGaaaa > 1:254792/1‑250 (MQ=255) gAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTGGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGc < 1:478602/249‑1 (MQ=255) aCGTGCGGCGACGGCTGCGGTTCGGTGGCGGCGGGGGTCAGGGGCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAAGCGAGCAGGCGATGGGTGTAGGCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAAc < 2:250112/251‑1 (MQ=255) tGCGGCGCCGGCTGCGGTTCGCTGCCGGCGGGGGTCGGGGTCGGCGCTTCGCCGTTTGCCAGCAGGGAAAAATCGGGCAGGCGATGGGGGTAGTCGTAGGTGGGGCCAGGCAGCGGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGt < 2:445778/250‑1 (MQ=255) cgACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGGCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑CGGTACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCCCGCTTCCCCCCACCCTCCCCCAAC‑TAGTGCGGTAGGCGCCCAGCAGGAAAAACGCTTCACCGTTATccc > 2:277779/1‑249 (MQ=255) tgctgTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGc > 1:301844/1‑251 (MQ=255) ctgTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCt > 1:374277/1‑251 (MQ=255) gTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGGAAATCGCTTCAACGTTATCGCCGCTGGCCTGt > 1:483489/1‑251 (MQ=255) gTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGt > 1:209385/1‑251 (MQ=255) cGCTGTCGGGGGTGGGCGGCGGCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAAACGAGCGGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTAGAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTc < 2:320673/251‑1 (MQ=255) gcggGGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGGGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTcagcgccag < 2:446268/251‑1 (MQ=255) gtCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCTCCGCTGGCCTGTTTCAACGCCAGcgccgc > 2:137614/1‑251 (MQ=255) gtCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCCCCAACGTGATGCTGTAGGCGCCCAGCAGGAAAATCGCTTCAACAGTATCGCCGCTGGCCGGTTTTCGCGCCAGcgccgc > 2:191077/1‑251 (MQ=255) gcGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAACCGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCgg < 1:132534/249‑1 (MQ=255) ccGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑CGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGGGATGCGGTAGGCGCGCCGCAGGACAATCGCTTCACAGTTATCACCGCTGGCCTGTTTCAGACCCCGCGCCGCCAGTTCGCGGTCGGCact > 2:132589/1‑249 (MQ=255) cGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCCACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCCATg > 2:119279/1‑251 (MQ=255) gtgtgccggcggggTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCAAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGAGACGGCGTTC‑GAGCCGCATCCCGGTGGTG‑CCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATgc < 2:313394/240‑1 (MQ=255) gTTTGCCGGCAGGGTAAACTCGAGCAGGCGCTGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATACACGACGG‑AGCTGCGGCGTTC‑GAGCCGCATCCCGGCGGCG‑TCGAACGGCTCGCTTACCGCACGC‑CTCGCCAACTCGATGCGGTAGGCGCGCGGCAAGACACTCGCTTCAACGTTCTCGGCGCTGGCCTGGTTCAGCGCCCGCGCCGCCAGTTCCCTGTAGGCAATgc > 2:45508/1‑251 (MQ=255) ccAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCt > 1:464886/1‑251 (MQ=255) cagcagGGTAAAACCGAGCAGGCGAGGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGCCGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTCCCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCtt < 1:170550/251‑1 (MQ=255) gcagGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTCC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCg < 1:55902/251‑1 (MQ=255) agGGTAAAATCGAGAAGGAGGTGGGAGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGAATCCCGGTGGTG‑TAGAGAGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGTGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCCGAGCCAGCGCCGCCAGTTCGCGGTCGGGCATGCCGCCTTCggg > 1:111540/1‑250 (MQ=255) agGGGAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGATGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCggg > 2:452897/1‑250 (MQ=255) aaaaGCGAGCGGGGGAGGGGTGGAGTCGTGGGTGGGGCGAAGCGGCGGGCCGCCGGGACGGTCTTTATAAACTACGG‑AGATACGG‑GTTCCGGGACGCATCCCGGGGGGG‑TCGCGCGGCTCGCTGACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTCCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGtcatca < 2:85012/251‑1 (MQ=255) ccggggaggggatggggtaagtggTAGGTGGGGCCAAGCAGCGGGCGGTCGGGAAGTTCTTTAAAAACGACGG‑AGATCCGGCGTCC‑GAGCCGCACCCGGGGGGTG‑TCGGGCGGCCCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCAcgcg < 2:162606/228‑1 (MQ=255) gAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTCCGGTCATCACGCGAt > 1:442742/1‑251 (MQ=255) gAGCAGGCGAGGGGTGTAGTCGTAGGTGGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGAt < 1:285431/251‑1 (MQ=255) ggggggggatggggtgggTCGGAGGGTGGGCCAAGGGGCGGGCCGCCGGGAATGTCTTTATAACCGCGGG‑AGTTACGGGGCTC‑GAGACGCATCCCGGTGGTT‑TCGAGCGGTTCGCTTACCGCCAGC‑TTCGCCAACGTGAGGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTAGCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATc < 2:254792/234‑1 (MQ=255) cAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCt > 1:373128/1‑250 (MQ=255) aGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAAC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAACTAGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCCGTTCGCGGTTGGCAAGTCCGCCCTCGGTCATCCCGCGATCTAc > 2:363935/1‑251 (MQ=255) cGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACcgc > 1:237470/1‑251 (MQ=255) gATGGGTGTAGTCGTAGGTTGGGCCAAGCAGATGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCACCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCCACCTACcgcg > 2:498710/1‑251 (MQ=255) tGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACcgcg > 1:357914/1‑249 (MQ=255) gggTGTAGTCGTAGGTTGGGCCAAGCAGCGGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGACGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGTTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAg < 1:52396/250‑1 (MQ=255) aGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAActgctg < 1:113479/250‑1 (MQ=255) tGGGCCAAGCATCGGGCCGCCGGGAAGTTATTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑GCGAGCGGCTCGCTTACCGCTAGC‑TTCTCCAACGTGATGCGGTAGGCGTGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCTTCACGCGCGCTACCGCGAGGTTAAACTTCTGTTCa < 1:366598/250‑1 (MQ=255) gggCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAACTGCTGTTCAAt > 1:35867/1‑251 (MQ=255) aaGCAGCTGGCCGCCGGGAATGTCTTTATAAACGCCGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAACTGCTGTTCAATCTggg > 1:392160/1‑251 (MQ=255) agcagcTGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGGCATCTACCGCGGGGTTAAACAGCTGTTCAATCTgggg > 2:386036/1‑250 (MQ=255) tGGCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAACTGCTGTTCAATCTGGGCGACGCt > 1:343039/1‑251 (MQ=255) ggCCGCCGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAACTGCTGTTCAATCTGGGCGACGCTc > 1:302226/1‑251 (MQ=255) gccgccGGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCCGGCCTGTTTCAGCGACAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCCAGGTTAATCTGCTGTTCAACCTGGGCGACGccc > 2:42310/1‑248 (MQ=255) cgccgGGAATGTCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCCGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCCCGCGATCTACCGCGAGGTTAAACTGCTGTTCAATCTGGGCGACGCTCAGt > 2:194211/1‑251 (MQ=255) ccgGGAATGTCTTTATAAACG‑CGGTGGGTACGGCGTCC‑GTGCCGCATCCCGGTGGTT‑GCGAGCGGCTCGCTTCCCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGAAGCAGGAAAATCGCTTCAACGTTATCGCCGCGGGCCTGTTTCAGCGCAAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAACTGCTGTTCAATCTGGGCGACGCTCAGTTc < 2:501682/251‑1 (MQ=255) ggAATGCCTTTATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCACGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAACTGCTGTTCAATCTGGGCGACGCTCAGTTCggg < 1:194920/251‑1 (MQ=255) tcttttATAACCGACGG‑ACATACGGCTTCC‑GAGACGCATCCCGGTGGTG‑CCGAGCGGCGCGCCTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAACTGCTGTTCAATCTGGGCGACGCTCAGTTCGGGCaaa < 2:50629/247‑1 (MQ=255) tttATAAACGACGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAACTGCTGTTCAATCTGGGCGACGCTCAGTTCGGGCaaa > 1:50629/1‑247 (MQ=255) ttATAAACGGCGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGGTGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCGCGCGATCTACCGCGAGGTTAAGCTGCTGTTCAATCTGGGCGACGCTCAGTTCGGGCAAATCGGt > 1:190061/1‑251 (MQ=255) gcgg‑GGATACGGCGTGC‑GGGACGCACCCCGGGGGTG‑TCGAGCGCCCCGCTACCCGCCAGC‑TTCGCCAACGTGATGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCGGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAACTGCTGTTCAATCTGGGCGACGCTCAGTTCGGGCAAATCGGTATCGCCTCg < 2:429627/251‑1 (MQ=255) | CAGGGGTAAACCGGCGGCGTGCGGGTGATGTCATCCGGCTGTGCGCCGCTATCCTCTTCAAACTTCGCCAGCCCCTGACGCGCCAGCAGGCTGAAAACGTGCGGCGACGGCTGCTGTTCGCTGTCGGCGGTGGTCAGCGTCGGCGCTTCGCCGTTTGCCAGCAGGGTAAAATCGAGCAGGCGATGGGTGTAGTCGTAGGTTGGGCCAAGCAGCTGGCCGCCGGGAATGTCTTTATAAACGGCGG‑AGATACGGCGTTC‑GAGACGCATCCCGGTGGTG‑TCGAGCGGCTCGCTTACCGCCAGC‑TTCGCCAACGTGGTGCGGTAGGCGCGCAGCAGGAAAATCGCTTCAACGTTATCGCCGCTGGCCTGTTTCAGCGCCAGCGCCGCCAGTTCGCGGTCGGCAATGCCGCCTTCGGTCATCACGCGATCTACCGCGAGGTTAAGCTGCTGTTCAATCTGGGCGACGCTCAGTTCGGGCAAATCGGTATCGCCTCG > NC_000913/4320104‑4320594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |