Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,511,466 C→T V293V (GTG→GTA)  yhfZ ← putative DNA‑binding transcriptional regulator YhfZ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,511,4660CT98.2% 174.5 / ‑6.7 57V293V (GTG→GTA) yhfZputative DNA‑binding transcriptional regulator YhfZ
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (23/33);  total (24/33)
Fisher's exact test for biased strand distribution p-value = 4.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

TTCACCACGGCGACTGCGCATCAGTGCACTCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑CACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAA  >  NC_000913/3511243‑3511706
                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                
ccccccccGGCGAGTGCGCATCAGGGCCCTCGCCATATGTGGCATCGCCTTCGTTCCTTGCTCACGTCGCATCGGCAGATGGCACTCTGTTTCCAGTACGGTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCATGTTGAGTCTGGTTTCCATATCAGATGCCTTGCGTTTAATAACTCGGTTCCTGTTCCCCACG‑TACTACCCGTTTTTGATGTGCGAGCAgg                                                                                                                                                                                                                       <  2:486117/244‑1 (MQ=255)
 tcACCACGGCGACTGCGCATCAGTGCACGCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAg                                                                                                                                                                                                                        <  1:260155/249‑1 (MQ=255)
           gACTGCGCATCAGTGCACTCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTCCGCACCGGCAGATGGAACTCTGTTTCCAGTACGATGACGACCTGCGTCATGCCTTTGCAGATGTCATTATCAATAACGCCTGCCTCGCACAGCAGATTGAACCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGCTTCCTGTTCCCCACT‑TACTACCCGTTGTAGATGGGCCAGCAGGGCGTGTTTATc                                                                                                                                                                                                            >  1:24210/1‑251 (MQ=255)
               gcgcATCAGTGCACTCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCTCT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACa                                                                                                                                                                                                        <  1:423640/251‑1 (MQ=255)
                   aTCAGTGCACTCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGATTCCTGTTCACCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACgg                                                                                                                                                                                                    >  1:228774/1‑251 (MQ=255)
                         gCACTCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGACTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACgc                                                                                                                                                                                               >  1:428185/1‑250 (MQ=255)
                           ccTCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCTCTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGGTGAGTCTGGTTTCCATAGCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACATCGGCACgcagc                                                                                                                                                                                            <  2:304690/250‑1 (MQ=255)
                             tCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCgt                                                                                                                                                                                                                   >  1:231477/1‑226 (MQ=255)
                             tCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCgt                                                                                                                                                                                                                   <  2:231477/226‑1 (MQ=255)
                               gCCATATGGGTCTTCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATTGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGGCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAgtt                                                                                                                                                                                        <  2:290755/251‑1 (MQ=255)
                                    atGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGc                                                                                                                                                                                   >  1:272894/1‑251 (MQ=255)
                                         tCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACACCGGCACGCAGCAGTTGTTGCATTgg                                                                                                                                                                              >  1:319517/1‑251 (MQ=255)
                                               ccctCGTTCCTAGCTCAATGCGAACCAGCAGATGGCCCTCTGTTTCCAGTACGTTGACGACCTGCCTCATGCCTTTGCAGATGTCCTTATCAATAACGACTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTAGTTTAATCACTCGGTTCCTGTTACCCACT‑TACTACACGTTGTTGATGCGCGAGAAGGGCGTGTTTATCTACAACGGACCGCAGCGGTTGTTTCATTGGGTAatc                                                                                                                                                                        >  2:152992/4‑251 (MQ=255)
                                                 aTCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTCCGTTGACGCCCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAatcat                                                                                                                                                                      >  2:479052/1‑251 (MQ=255)
                                                   cGTTCCTTGCTCACTGCGCTCCGGCAGATGGCATTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAatcaccg                                                                                                                                                                    <  2:104152/251‑4 (MQ=255)
                                                   cGTTCCTTGCTCACTGCGCACCGGCAGCTGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCTTGCCTCGCCAAGCAGGTTGCGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCCTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGAAATCATCg                                                                                                                                                                    >  2:101930/1‑251 (MQ=255)
                                                      tCCTTGCTCACGGCGCACCGGCAGATGGCACTCTGTTTCCAGTTCGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTGCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGAc                                                                                                                                                                  <  2:375053/250‑1 (MQ=255)
                                                           gCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGCGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGt                                                                                                                                                            >  1:204808/1‑251 (MQ=255)
                                                           gCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTcgcg                                                                                                                                                             <  2:316991/250‑1 (MQ=255)
                                                                   cgcACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCgtgt                                                                                                                                                                                                                 <  1:135980/190‑1 (MQ=255)
                                                                   cgcACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCgtgt                                                                                                                                                                                                                 >  2:135980/1‑190 (MQ=255)
                                                                   cgcACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCa                                                                                                                                                    <  1:197832/251‑1 (MQ=255)
                                                                     cACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACg                                                                                                                                                  >  1:391085/1‑251 (MQ=255)
                                                                         ggCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCtt                                                                                                                                              <  1:440125/251‑1 (MQ=255)
                                                                           cAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGc                                                                                                                                                                                                                              >  1:258427/1‑169 (MQ=255)
                                                                           cAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGGTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGc                                                                                                                                                                                                                              <  2:258427/169‑1 (MQ=255)
                                                                                   aCTCTTTTTCCAGTACGTTGACGACCTGCATCATTCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGGTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGAAGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTg                                                                                                                                    <  2:80880/251‑1 (MQ=255)
                                                                                     tctGTTTCCAGTACGTTGACGACCTGCATCATGCCTGTGCATATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATAGCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTGCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGt                                                                                                                                   <  1:104817/250‑1 (MQ=255)
                                                                                      ctGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGt                                                                                                                                   <  1:7345/249‑1 (MQ=255)
                                                                                           tCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAAt                                                                                                                             <  1:39716/250‑1 (MQ=255)
                                                                                                   gTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGCCAGGACCACGGCTTCGGGGGCCTGTAAAAATCGCGGTTCg                                                                                                                    >  2:29172/1‑251 (MQ=255)
                                                                                                     tGACGACCGTCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGATTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGAGGGGCGAGCAGGCCGTGTTTATCTACAACGGCAACCAGCCGTTGTTACATTGGGTCATCATCGCCTCGCGACAGCACAACGTCTTCAGTgacttgttacacacgcggcgcgcc                                                                                                                  >  2:153396/1‑228 (MQ=255)
                                                                                                         gacCTGCATCATGCCTTGGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCAATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGGTGATGGGCGAGCAGGTCGTGTTTATCTACATCGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGATTCGCGGCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCtgtg                                                                                                              <  1:215556/251‑1 (MQ=255)
                                                                                                          acCTTCATCATGCCTTTGCAGATGGCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTGCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGa                                                                                                             <  1:222054/251‑1 (MQ=255)
                                                                                                           ccTGCATCATGCCTTTGCAGATTTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTTCATAGCAGAGGTCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TTCTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTAGCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCGTCGGGGGCCTGTAAAAATCGCGGATCGTCGGTGAg                                                                                                            <  2:321742/251‑1 (MQ=255)
                                                                                                             tGCATCATGGCTTTGCAGATATCCTTATCAATACCGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACTTCA‑TACCCGTTGTTGATGAGCGCACAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTAGAGGCCGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCCGTGAgcg                                                                                                          >  2:284213/1‑251 (MQ=255)
                                                                                                                       cTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACg                                                                                                                                                                                                >  1:254314/1‑155 (MQ=255)
                                                                                                                       cTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACg                                                                                                                                                                                                <  2:254314/155‑1 (MQ=255)
                                                                                                                       cTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGCGCGGCGTCGCctc                                                                                                >  1:201590/1‑251 (MQ=255)
                                                                                                                              gATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATccc                                                                                         >  1:195777/1‑251 (MQ=255)
                                                                                                                                        tCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTATCGTTTCCATATCAGATGCCTTTCGTTTAATCACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGAAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGCCTGTGAGCGGCGTCCCCCCTCATCCCAGCATggcc                                                                                >  2:206891/1‑248 (MQ=255)
                                                                                                                                           aTAACTCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGtt                                                                            <  2:31300/251‑1 (MQ=255)
                                                                                                                                             aaCGCCTGCCTCGCAAAGCAGGTTGAGTCTGGGTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCTCT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGGTGCAGTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTc                                                                           <  1:479261/250‑1 (MQ=255)
                                                                                                                                                gcctgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCCGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGttt                                                                       >  1:43250/1‑251 (MQ=255)
                                                                                                                                                        cGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGcc                                                                 <  1:306907/249‑1 (MQ=255)
                                                                                                                                                               cAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTc                                                        <  2:169359/251‑1 (MQ=255)
                                                                                                                                                                     gAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGGCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGAt                                                   <  1:75006/250‑1 (MQ=255)
                                                                                                                                                                      aGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATc                                                  >  1:246047/1‑250 (MQ=255)
                                                                                                                                                                          ttgTTTCCATATCAGTTGCCTTTCGTTTAATCACTCGGTCCCTGTTCCCCACT‑TTCTACCCGTTGTTGATGGGCGTGCAGGGCGTGGTTATCTTCAACGGCACGCAGCAGTTGTTGCATTGGGTTATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTTAGCTGCGGCGCCTCTAACCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCg                                              <  2:410807/248‑1 (MQ=255)
                                                                                                                                                                               tCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCg                                         <  2:387965/250‑1 (MQ=255)
                                                                                                                                                                                ccaaatCAGATGCTTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑TACTGCCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTGCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCTCGTTCCAGATCACCGCATCGa                                        <  2:473903/246‑1 (MQ=255)
                                                                                                                                                                                                     taataaCTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTg                  >  1:206810/1‑251 (MQ=255)
                                                                                                                                                                                                      aataaCTCGGTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTg                  <  1:91136/250‑1 (MQ=255)
                                                                                                                                                                                                              ggTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACtctc         >  1:225988/1‑251 (MQ=255)
                                                                                                                                                                                                              ggTTCCTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACtctc         <  1:39217/251‑1 (MQ=255)
                                                                                                                                                                                                                  ccTGTTCCCCACT‑TACTACCCGTTGTTGATGGGCTAGCAGGGCGTGTTTATCTACAACTGCACGCAGCAGTTGTTGCAGTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGTCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTGCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTg      <  2:201590/250‑1 (MQ=255)
                                                                                                                                                                                                                      ttCCCCACT‑TACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATaa  <  2:505253/250‑1 (MQ=255)
                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                
TTCACCACGGCGACTGCGCATCAGTGCACTCGCCATATGTGTCATCGCCATCGTTCCTTGCTCACTGCGCACCGGCAGATGGCACTCTGTTTCCAGTACGTTGACGACCTGCATCATGCCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACT‑CACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATCATCGACTCGCGTCAGGACCACGGCTTCGGTGGCCTGTAAAAATCGCGGATCGTCTGTGAGCGGCGTCGCCTCTAATCCCAGCATGGTCAGTTCGTTTTCCGCCACCACGTTCCAGATCACCGCATCGACATCGCCTTTAACAATGCGTTGTAAACTCTCGTGATAA  >  NC_000913/3511243‑3511706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑