| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,364,664 | G→A | G620R (GGA→AGA) | yhcD → | putative fimbrial usher protein YhcD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,364,664 | 0 | G | A | 96.3% | 162.3 / ‑5.8 | 54 | G620R (GGA→AGA) | yhcD | putative fimbrial usher protein YhcD |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (23/29); total (24/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGT‑CTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGCC > NC_000913/3364423‑3364898 | gTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGT‑CTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGAcc < 2:340282/250‑1 (MQ=255) cGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGT‑CTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCAcc < 1:344074/251‑1 (MQ=255) aTGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGT‑CTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTgg > 2:240793/1‑251 (MQ=255) gACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGGTGT‑CTCAGATGAGATGTTCTACGATGTGAAGGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACTCCCAAGTCAGCCGTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTCCAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTgg < 1:282956/249‑1 (MQ=255) aTCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGT‑CTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCATGCCGCAGGAGCAAGCGGCAGCGATAGCCGTCCTTACAACGGTACGATGTCAGGTGGGATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTAt > 2:175879/1‑250 (MQ=255) tATGGTACTGGTGTCATGGGAGTCGT‑CTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACCTGATCAGAGAGTGACCTTTTCAcccgatcggacgagcgtcgtgtcggg > 2:128823/1‑227 (MQ=255) tATGGTACTGGTGTCATGGGAGTCGT‑CTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCAcc < 1:128823/227‑1 (MQ=255) tATGGTACTGGAGTCATGGGAGTCGT‑CTCAGATGAGCTGTCCTACTATGCGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTCTCAGTTCCAATCTCCATTACACCCAAGCCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACCATGTCAGGTGGGATTGCCGGACCTGATCAGAGAGTGACCTTTTCACCGTGGTCTATCAATgcaactctcgc > 2:180775/1‑241 (MQ=255) gTACGGGTGTCATGGGAGT‑GTGCTCAGATGAGATGTCATACTATTTGAATGTTGAACGAAATCACGACGAACGGGAAACGAGCTTGAACGGCAGTATCAGTCCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGATAGTGACCGGGTCACCGTGGACTATCAATGACACTTTCTCCATc < 2:452436/251‑1 (MQ=255) aTGGGAGTCGT‑CTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTAGTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGa < 1:80405/251‑1 (MQ=255) ggAGTCGT‑CTCAGATGAGATGACATACTAAGTGAATGCTGAACGAGATCACGCCGCACGTGAACCGAGCTTGAACGGCAGAATCAGTTCCAATCTCCATTACACCCAAGTCAACCTTGCCGCAGGAGCAAGCGGCAGTGATATCCGTACTTACAACGGGACGCTGTCATGAGGTATTGCCGAACATGGTCAAAGAGTGCCCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCatccatgtata > 2:400625/1‑240 (MQ=255) gt‑cTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAatat > 1:162071/1‑251 (MQ=255) gtcccAGAGGAGATGTCCTACTATTTGAATGCTGAACGAGAACACGACGAACGTGAAACGAGCTTGAACGGCAGAATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTTGTATTGCCGTACATGATCAGAGAGTTACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATTGATAACAatat < 2:327291/247‑1 (MQ=255) agatgagatgTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAg < 1:31083/251‑1 (MQ=255) gatgTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCATTGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGTTGTc > 2:258117/1‑250 (MQ=255) gTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGa > 2:91713/1‑250 (MQ=255) tCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAAt > 1:116848/1‑251 (MQ=255) actaTGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTa < 1:286229/249‑1 (MQ=255) actaTGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTAc < 1:224139/250‑1 (MQ=255) ctaTGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCCGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACAt > 1:385270/1‑251 (MQ=255) tgAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGCCTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGACTTACAtctc > 2:466869/1‑249 (MQ=255) aTGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTcaggc > 1:300373/1‑250 (MQ=255) cGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGGCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATAGTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGt < 2:380459/251‑1 (MQ=255) cGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGGATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGt < 2:383079/251‑1 (MQ=255) tCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGATCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGTTGTCAGGTGGTATTGCCGTACATGATCAGAGCGAGACCTTTTCACCGTGGACTATCATTGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAATATgg > 2:500849/1‑250 (MQ=255) acgacgAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGGTGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATCTTGCAGTTGTAAAAATTAAATCTCAGGCAGGCCCCGTATggca > 2:287558/1‑248 (MQ=255) gacgaACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGa < 1:139140/251‑1 (MQ=255) gAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCggg < 1:98050/250‑1 (MQ=255) aaaCGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCAACGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGCTTTCCggggg > 2:431795/1‑250 (MQ=255) tGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGt < 1:499615/250‑1 (MQ=255) aaCGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCAt < 2:116848/251‑1 (MQ=255) aaCGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCAt < 1:395047/251‑1 (MQ=255) aCGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTAAGCCTTGCCGCAGCAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGAGGTATTGCCGTACATGATCAGAGAGAGACCTTTTCACCGAGGACTATCAATGACACTTTCGCCATCGCAAAAATGGCTAACAATATTGCAGGCGTCAGAATTACATCTCAGGCAGGCCAAGTACGGACAGATTTTCGGGGTGATGACGTTAtt > 1:63074/1‑251 (MQ=255) ggCAGTATCAGTTCCAATTTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTcc < 2:207915/251‑1 (MQ=255) tCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGAAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATc > 2:460316/1‑251 (MQ=255) aaTCTCCATCACACCCAAGCCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACATACAACGGTACTATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTGTCACCGTGGACTATCAAGGACACGTTCGCCATCGCAAAAATGGATAACAATATGGCAGGTGTCAGAAGTACATCTCAGGCAGGCCCAGGATGGACAGATTTTCTGGGTAATGCCGTCATTCCATCAATCCAGCCGTg < 2:176757/251‑1 (MQ=255) ccATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTgg < 1:442731/247‑1 (MQ=255) cAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTgag < 1:211045/250‑1 (MQ=255) gCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATc < 1:287558/251‑1 (MQ=255) cAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTg < 1:129416/251‑1 (MQ=255) cAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCaaaaa < 1:213314/251‑1 (MQ=255) gTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCCGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAAt > 1:480318/1‑251 (MQ=255) gTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCaaaaaa > 2:107996/1‑250 (MQ=255) aTAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCACTCAAGCCGTGGCGAACATCAGGGGTTGAGATCGATACCGCAAGCTTGCCAAAAAATgcc > 2:202362/1‑249 (MQ=255) gCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGTCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGat < 1:240793/251‑1 (MQ=255) aCAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAAc < 1:258117/251‑1 (MQ=255) cAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGTGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACg > 1:10442/1‑251 (MQ=255) ggTACGATGTCAGGTGGGATTGCCGTACATGATCAGAGAGTGTCCTTTTCACCGTGGACTATCAATGTCACTTTCGCCACCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGcac < 2:499630/251‑1 (MQ=255) tGTCAGGCGGGATTGCCGTACATGATCAGAGAGCGACCTTTTCACCGTGGACTATCACTGCCACTTTGGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGACTTACATCTCAGGCAGGCCCAGTATGGACAGATTTACGGGGTAATGCCGTCTTTCCATCACTCCAGACGTGGCGAACATCAAGAGTTGAGATCGATACCGCCAACTTGCCAAAAAATGACGGTATCGGTAACGGCACaacattg > 2:112313/1‑246 (MQ=255) cAGGTGGTATTGCCGTACATGATCTGAGAGTAACCCTTTTACCGAGGACTATCAATGACCCTTCCGCCATCGCAAAAATGGATAAAAATATTGCAGGTGGCAGAATTACATCGCAGGCAGGCCCAGTATGGACACATTTTCGGGGTAAGTCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCAGTCACGGCACAAAAATGAt < 2:22498/250‑1 (MQ=255) gtggtATTGCCGTACATGATCAGAGAGTGACCTTTTTACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCaaa < 1:51494/251‑1 (MQ=255) gtATTGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTGCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACaa < 1:460316/251‑1 (MQ=255) tGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGCTATCGGTAACGGCACAACAATGATCAAACAAGGcc > 1:259464/1‑251 (MQ=255) tGCCGTACATGATCAGAGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCAAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGcc > 1:27476/1‑251 (MQ=255) | GTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGT‑CTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGCC > NC_000913/3364423‑3364898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |