| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,587,112 | C→T | A461V (GCA→GTA) | narQ → | sensor histidine kinase NarQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,587,112 | 0 | C | T | 89.6% | 113.0 / 5.1 | 52 | A461V (GCA→GTA) | narQ | sensor histidine kinase NarQ |
| Reads supporting (aligned to +/- strand): ref base C (1/4); new base T (15/28); total (20/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.45e-01 | |||||||||||
TACTTACGTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATG‑CGCGAACGCGCGGAACGGCTAGGTGGGACGCTGACTTTTTCAC > NC_000913/2586865‑2587357 | tacttacGTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCTCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACt > 1:245554/1‑251 (MQ=255) gTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGGTACGCGGGCTGTTGAATACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGGGGGAAATGGTGGATAAGTT‑CAACAAACCAACACAG‑GCCAAACAGGCCCCCGGCTGCCGTCTGCCAAACCTGGGACTGGAATCGCAAATgg > 2:488877/1‑250 (MQ=255) aCGTTACTGAAGCGGTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGAGTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTGCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTTGTACTGGATGCGCAAATGCAGGt < 2:133344/251‑1 (MQ=255) ggAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCAGTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACTGGATGCGCAAATGCAGGTGCATttg < 2:234329/250‑1 (MQ=255) gAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCAttt < 2:379936/249‑1 (MQ=255) cGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAatt < 2:210176/251‑1 (MQ=255) aCCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTc < 1:488877/251‑1 (MQ=255) cGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTGCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTcgc < 2:82018/251‑1 (MQ=255) ggAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTcgcg < 1:306296/251‑1 (MQ=255) gAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCCTTGGGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACTGGCTGCCCAAACGCAGGTGCCTTTGTTGCAAATTATTcgcgg > 2:132723/1‑250 (MQ=255) gTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAg < 1:382543/251‑1 (MQ=255) aTCATGGCCGATTTTTCCCAGGCGTTGAATGATGCGTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGc < 2:374585/250‑1 (MQ=255) cATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCac < 1:453543/250‑1 (MQ=255) tttCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGATCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAg < 1:479948/250‑1 (MQ=255) ccAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTTTTTACCACTTTCCGCCTGGATCTGCAGCAGGCGGATCTCCCCTCCGAATTTGGGGAAATGCTGGATACGGTACAA‑AATCACAC‑CAGCGCCAAACTGCCCCTCGCATGCCGTCTTCCCACCCTGGAAATGGATGCACAAATGCAGGCGCATTTGTTGCACATTATTCGAGAAGCGGTGCTGAATGCGATGAAGCACGCCCAAGCCAGccaa > 2:164371/1‑247 (MQ=255) cGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGcc > 1:415264/1‑251 (MQ=255) cGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGGGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGcc > 1:27327/1‑251 (MQ=255) gCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGGACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAATTCGCCGCCAGTTGCGTCACcgcac > 2:212395/1‑249 (MQ=255) gTTGACTACTTCCCGCCTGACGCTGCAGCAGGCGGATCGCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATcac < 2:72986/250‑1 (MQ=255) actactTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGt > 1:476938/1‑251 (MQ=255) ttccgccgggagCTGCAGCAGGCGGAATTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCAGTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTtat < 2:367918/238‑1 (MQ=255) cgacggACGCTGCAGAAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCTAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCg < 2:125871/246‑1 (MQ=255) tGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCacgccaac > 1:257008/1‑185 (MQ=255) tGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCacgccaac < 2:257008/185‑1 (MQ=255) cGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCAAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAAGTATTCGCGAAGCGGTGCTGAATGCGAAGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTTATAAc < 1:347448/251‑1 (MQ=255) gcagcaGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACgg < 1:204712/249‑1 (MQ=255) gcagcaGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACgg < 2:177686/249‑1 (MQ=255) cGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATc > 1:175346/1‑251 (MQ=255) cGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATc < 2:175346/251‑1 (MQ=255) cGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGaacg > 1:262203/1‑249 (MQ=255) cATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGa > 1:314723/1‑250 (MQ=255) aTTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGCTTGGTATCGGTGAACCGAAAGAAc > 2:299308/1‑251 (MQ=255) ttaGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAAcc < 2:29668/248‑1 (MQ=255) tGAGGGAAATGCTGGATTCTTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCCCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGGATCGGTGAACCGAAAGAAcc < 2:86750/250‑1 (MQ=255) gAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCg < 1:107278/251‑1 (MQ=255) gAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGTTTGGTATCGGTGACCCGAAAGCACCCGAAgg > 1:229407/1‑251 (MQ=255) aTGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCATCCCTGGCACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGTTATCGGTGAACCGAAAGAACCCGAAGGTCa < 1:449224/251‑1 (MQ=255) tGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGACTGCCAACCCTGGAACTGGATGCGCCAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGACAACGACAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGACAGAACCCGAAGGACATTAt > 1:499663/1‑251 (MQ=255) ggATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGCAAGAACACGAAGGACATTATg > 1:455737/1‑251 (MQ=255) cacgctACAA‑AATCAAAC‑CAGCGCCAAAATGTCCCTCGACTGTCGTCTGCCATCCCTGGTACAGGATGCGCAAATGCAGGTGCATTTGGTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCTGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGATCCCGAAGGTCATTATGGTc < 2:187088/246‑1 (MQ=255) gTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGaa > 1:160132/1‑220 (MQ=255) gTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGaa < 2:160132/220‑1 (MQ=255) tACAA‑ACTCAAAC‑CAGCGCCAAACTGACCCGCGACTGCCGTCTGCAAACCCTTGTACTGGATGCGCAAATGCAGGTGCAGTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGACAACGCCAGCGAAATCGCCGGCAGTTGCGTCACCGCGCCGGACGGCTATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGaa < 2:146335/250‑1 (MQ=255) cAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGTTTCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTGGCGTCACCGCGCCGGACGGCAATCACGCGGTTTATATCCGTGATAACTGGATTGGTATCGGTGTACCCAAAGAACCCGAAGGTCATGATGGTCTGAATATCATg‑cg < 1:55947/251‑1 (MQ=255) cAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGGCTGAATATCATg‑c < 1:394103/250‑1 (MQ=255) c‑cAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGAtt > 2:199019/1‑194 (MQ=255) c‑cAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGAtt < 1:199019/194‑1 (MQ=255) cgcCAAACTGATCCTCGACTGCCTTCTGGCAACCCTGGTACTGGATGTGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCGCCGCGCCGGACTGCAATCACACGGGTTATATCCGTGATAACGGGATTGGTATCGGTGATCCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATG‑CGCGAAcgcg < 2:241487/251‑1 (MQ=255) ccAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGAGCATTTGTTGCAAATTATTCGCGAAGCAGTGCTGAATGCGCTGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCACTCACACGGTTTATATCCGTGCTACCGGGATTGGTATCGGTGAACCGAAGGCACCCTAAGGACATTCTGGGCTGAATATC‑TGTCGCGAAcgcgcg > 2:138373/1‑251 (MQ=255) acacTCGACTGCCGTCTGCCAACCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATG‑CGCGAACGCGCGGAACGGCt < 1:337119/248‑1 (MQ=255) aaCCCTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATG‑CGCGAACGCGCGGAACGGCTAGGTGGGACGCTGACttttt < 1:382773/251‑1 (MQ=255) ccTGGTACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATG‑CGCGAACGCGCGGAACGGCTAGGTGGGACGCTGACTTTTTcac > 1:354634/1‑251 (MQ=255) | TACTTACGTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAA‑AATCAAAC‑CAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATG‑CGCGAACGCGCGGAACGGCTAGGTGGGACGCTGACTTTTTCAC > NC_000913/2586865‑2587357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |