| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,121,547 | G→A | intergenic (‑60/+14) | dinI ← / ← pyrC | DNA damage‑inducible protein I/dihydroorotase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,121,547 | 0 | G | A | 96.5% | 83.1 / ‑6.3 | 29 | intergenic (‑60/+14) | dinI/pyrC | DNA damage‑inducible protein I/dihydroorotase |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (14/14); total (14/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
ATGCGCTGTTTATCTTCTTTTGTCGCGCCAATAACCGATAAATTATTCGCTGCGGCATAACGTACCGATACGTGGCCTTCATTATCAGGAAACGCATACTGAATACGGCGGGAAAGTTCGCCAGCCAGGGCGTCAATAGCCCCAGCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAGGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCAAAGACGGTAGCGTAACTGCCCAGCGCGGTT > NC_000913/1121300‑1121789 | aTGCGCTGTTTAACTTCTTGTGTCGCGCCAAGAACCGATAAATTATTCGCTGCGGCATAACGGACCGATACGGGGCCTTCATTGTCAGGAAACGCATACTGAATTCGGCGGGAAAGTTCGCCAGCCAGGGCGTCAATAGCCCCAGCTGGCATTGGAGAAGTTTTCGCTATGGTGACTTCATTTCGAATAATAGTCCTCTGTTGAATATAC‑TTTTTATTTATACAGTTAATATAACTGAATGACAACAAGaa < 2:460730/251‑1 (MQ=255) ttcttTTGACGCGCCAATAACCGATAAATTATTCGCTGCGGCATAACGTACCGATACGTGGCCTTCATTATCAGGAAACGCATACTGAATACGGCGGGAAAGTTCGCCAGCCAGGGCGTCAATAGCCCCAGCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTa < 2:379221/250‑1 (MQ=255) aaaTTAGTCGCTGCGGCATAACGTCCCGATACGTTGCCTTCATTATCAGGAAACGCATCCTGAATACGGCGGGAAAGTTCGCCAGCCAGGGCGTCAATAGCCCCAGCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGttt < 2:87769/251‑1 (MQ=255) cGGCATAACGTACCGATACGTGGCCTTCATTATCAGGAAACGCATACTGAATACGGCGGGAAAGTTCGCCAGCCAGGGCGTCAATAGCCCCAGCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGaa < 2:106762/251‑1 (MQ=255) cGATACGTGGCCTTCATTATCAGGAAACGCATACTGAATACGGCGGGAAAATTTGCCAGCCAGGGCGTCAAAAGCCCCACCCGGCAATGGGAAAGTTTTCGCTTTTGTGGCTTCAATTCGCCTAATAGCCCCCCGTTGGATATAC‑TGGGTATTTTTACAGGGAAAATAAACTAATGTCAAAAAAAAACTACGA‑TTTTTTTTTTTTTACAGACCAGCGAACCGTTTTCCCGGCGGGGGATGGCAcccacgtg > 1:419421/1‑245 (MQ=255) gTGGCCTTCAATATCAGGAAACGCATACTGAATACGGCGGGAAATGTCGCCAACCCAGGCGTCAAAAGCCCAAGCTGGCAATTGGGAAGATTTCGCGATGGGGAGTTTAATTCGCATCATATCGCCCCGTTGAATATAAATAGT‑ATTTTTAAAGGGAAAATAACCTACTGACAACAAAAAGCTACGAATTTTTTTTTTTTACATAACCAACG‑ACCCGTTCCCCGGCGAGGAAAGGGACCAGCGCGtcttc > 1:307771/1‑247 (MQ=255) tCATTATCAGGAAACGCATACTGAATACGGCGGGAAAGTGCGCCAGCCAGGGCGTCAATAGCCCCAGCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCAtcagtcag < 1:62185/249‑1 (MQ=255) gTTCGCCAGCCAGGGCGTCAATAGCCCCAGCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTAcc > 1:485049/1‑249 (MQ=255) cagccagGGCGTCAATAGCCCCAGCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGAt > 1:77513/1‑251 (MQ=255) ccccAGCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGGTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCGTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCgg < 2:194976/251‑1 (MQ=255) gCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGTTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTTCCGTTTCCCCGGCGAGTAATGGCTCCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAAcc < 1:450289/251‑1 (MQ=255) cAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCAt > 1:192264/1‑249 (MQ=255) tGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAAc > 1:267017/1‑251 (MQ=255) aCTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTacagaacaga < 2:188325/251‑1 (MQ=255) tcaatgctcATAATAGCCCCCTTTTGAATATAC‑TGTATATTTATACAGGTAAAATAACCTAATGACAGCTAGAAGCTACGA‑GTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTGTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTGGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAAt < 2:403136/242‑1 (MQ=255) aTTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGTTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCtt < 2:299628/251‑1 (MQ=255) ataC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATttct < 2:216307/251‑1 (MQ=255) taC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAATAGAATGCTTCAAAGTGCTGCAAAGCATTCATttctt > 1:326885/1‑251 (MQ=255) aC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCAGACCGGTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAAACTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCTGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATttctt < 1:385974/250‑1 (MQ=255) atttatACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGACTGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCAAAAACg > 1:374716/1‑251 (MQ=255) ttatACAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCAAAAACGGt > 2:465205/1‑251 (MQ=255) cAGGTAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCAAAAACGGTAGCGt < 1:222619/251‑1 (MQ=255) tAAAATAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCCGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGACCAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCAAAAACGGTAGCGTAACt > 2:34535/1‑251 (MQ=255) aaaaTAACCTAATGACTACAGGAAGCTACGA‑TGTTTATGGTTTAACGGACCAGCGTACCGTGTACCCGGCGAGGAATGGCACCAGCGTGGCAACAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTGCCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCGGCAAAGCATGCATTTCTTCAAAGACGGTAGCGTacct < 2:81354/250‑4 (MQ=255) aaaTAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCAAACAAGGTAGCGTAACTGc > 2:356984/1‑251 (MQ=255) aTAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCAAAAACGGTAGCGTAACTGccc > 1:17596/1‑251 (MQ=255) tAACCTAATGACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCaaaaa > 1:338769/1‑231 (MQ=255) tAACCTAAGTACAACAAGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCaaaaa < 2:338769/233‑3 (MQ=255) tGACAACAAGACGCTACGA‑TTTTTATTGTTTACCGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCAAAAACGGTAGCGTAACTGCCCAGCGCGGtt > 2:80669/1‑251 (MQ=255) caacaaGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAg < 2:474154/194‑1 (MQ=255) caacaaGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAg > 1:474154/1‑194 (MQ=255) | ATGCGCTGTTTATCTTCTTTTGTCGCGCCAATAACCGATAAATTATTCGCTGCGGCATAACGTACCGATACGTGGCCTTCATTATCAGGAAACGCATACTGAATACGGCGGGAAAGTTCGCCAGCCAGGGCGTCAATAGCCCCAGCTGGCAATGGAGAAGTTTTCGCTATGGTGACTTCAATTCGCATAATAGCCCCCTGTTGAATATAC‑TGGTTATTTATACAGGTAAAATAACCTAATGACAACAGGAAGCTACGA‑TTTTTATTGTTTAACGGACCAGCGTACCGTTTCCCCGGCGAGGAATGGCACCAGCGTGTCATCAGTCAGTGCGATGCTTTCAGCAACCTGTTGCTCTTCACGTACCAGTTCGATGAATGTGTCGTTGACCGGCAACCCATAGAACTGCGGGCCGTTTACAGAACAGAATGCTTCAAAGTGCTGCAAAGCATTCATTTCTTCAAAGACGGTAGCGTAACTGCCCAGCGCGGTT > NC_000913/1121300‑1121789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |