| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,075,234 | C→T | V1217I (GTA→ATA) | putA ← | fused DNA‑binding transcriptional repressor/proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase PutA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,075,234 | 0 | C | T | 98.2% | 159.3 / ‑4.4 | 57 | V1217I (GTA→ATA) | putA | fused DNA‑binding transcriptional repressor/proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase PutA |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (36/19); total (37/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.30e-01 | |||||||||||
CGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCA > NC_000913/1074996‑1075479 | cGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCAc > 1:165711/1‑251 (MQ=255) ccAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGcc > 1:43106/1‑251 (MQ=255) gAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGACCACAGTATCTGGCTGCCCACCGCCAGc > 1:430952/1‑251 (MQ=255) ttCGCCACGGGCAAAACCCTGCACCGAAACAATTGTGCCATCCCGCGCGGCATCTGCTCCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCTCAGTACCTGGCTGCCCACCGCCAGCACGGCGGCGAGCt > 1:93910/1‑251 (MQ=255) cGCCACGGGCAAAACCCTGCACCGAAACAATTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGCAGCTGATCCGAATCACC‑GTGGAAGCTCACCGCATCACACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTAGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACCGTATCTGGCTGCCCACCGCCCGCACGGCGGCGAgatgg > 2:15223/1‑247 (MQ=255) gCCACGGGCAAAACCCTGCACCGAAACAATTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTg > 1:264539/1‑249 (MQ=255) aaaCCCTGCACCGAAACAATTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATc > 1:227755/1‑251 (MQ=255) aaCCCTGCACCGAAACAATTTGGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATcc < 1:181004/251‑1 (MQ=255) ccTGCACCGAAACAATTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGc > 1:79090/1‑251 (MQ=255) gccccGAAACAATTGTGCCATCCCGCGCGGCAACGGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCtc < 1:292267/247‑1 (MQ=255) acgccgctttccctacctccccGCGCGGCAACGGCTTCCCAAAATG‑CGCGAAGCGGATCCGATTCCCC‑GTGAAAGACCACCGCATCAAACGGTTGAGCGTTTATATTTTCCGCTTCCGCCAGTTGAATCCGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCAGCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCtcatc < 2:443497/232‑1 (MQ=255) cGAAACACTTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGCTCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCGGCCCCCCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTcatcat > 2:500959/1‑251 (MQ=255) aaaCAATTGTGCCACCCCGCGCGTGAATGGCTCCACCCAATG‑CTCGAATCT‑ATCCCAAACACCCGTTGAAGATCCCTGCATCAAACGGTTGAGGGTTTATATTTCCCGCTTTCGCCAGTGGAATACGTCCGCTGACGGCCGAGGGCAATGCCTTCACTACCTGCCGATGCAGCGCGTCATCCGGCCACAGTATCTGTCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCg < 2:43383/251‑1 (MQ=255) tCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCtcatc > 1:443497/1‑233 (MQ=255) ccGCGCGGAACCTCCTTCCCACTATG‑CGCAAAGCTGACCCGAATCCCC‑GGGGAACACCCCCGCATCAAACGGTTGAGCGTTTATATTTTCCGCTTTCGCCAGTTGAATCCGTTCGCTGACGGCCGATGGCAATGCCTTCACTAACGGACGATGCAGCGCGTCACCCGGCCACGGTATCTGGCGGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACAcgc < 2:382461/251‑1 (MQ=255) cgcgGCAACTGCTTCAC‑CAATGGCGCGAAGTTGACCCAAATCCCC‑GGGGAAGATCACCGCATCAAACGTTTGAGCGGTTATATTTCCCGCTTCCGCCAGTTGAATCCGTTCGCTTACGGCCGATGGCAATGCCTTCACTAACTGACGAGGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCt < 2:31156/251‑1 (MQ=255) ttCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGgcagc > 1:193509/1‑250 (MQ=255) acacaATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCg > 1:154158/1‑251 (MQ=255) acataaggctcgatgCTGATCCAAATCACC‑GTGGAAGATCTCCGCATAAAACGTTGGGGCTGGTATATTTGCCGTTTTCGCCGTTTAAATTCTGTGGCTGACTGCCGATGTCATTGCCTTCACTAACGGACGATGCAGCGCGTCTCCCGGCCACATTATCTGGACGTCCACCGCCAGCTCGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCAGCGGCAATACACAACACGCGCTCACGCGGCAGCAGCg < 2:306482/237‑1 (MQ=255) gCTGATCCGCATCACC‑GCGGAAGATCCCCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGCTGGCAATGCCTTCACTCACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCCCCGCCAGCACGGCGGCGAGCTGCGTCAGCCCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGCCCAGGTGTTGCGt > 2:473392/1‑251 (MQ=255) tGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTc > 1:122702/1‑251 (MQ=255) gATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATCCACAACCCGCGCCCACGCGGCAGCCGCCTCCAGGGGTTGCGTTc > 2:421597/1‑250 (MQ=255) gAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGt > 1:152716/1‑251 (MQ=255) gAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACCCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGt > 2:489127/1‑251 (MQ=255) aaGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGgc > 1:406666/1‑249 (MQ=255) aGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGGGTTGCGTTCACCCGTCGGCCCCgcccgc > 2:117378/1‑246 (MQ=255) ccACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGCCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAAt < 1:116986/250‑1 (MQ=255) cGCATCAACGGGTTGAGCGGTTATAGTTTCCGCTTCCGCCAGGTGAATGCGTTCGCTGACTGCCGAGGGCAAGGCCTCCACTAACGGACGATGCAGCGCGTCATCCGGCCACAGTATCGGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCGGTCGGCCCCGGCAGCAATCGtt < 1:473392/251‑1 (MQ=255) gCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTtg > 1:474730/1‑251 (MQ=255) aCGGGTGAGCGGTTATTTTTCCCGCTTTCGCCTGTGGAATACGTCCGCTGCCGGCCGATGGCAATGCCTTCCCTAACTGCCGAGGCAGCGCGTCATCCGGCCCCAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTcct < 2:154158/251‑1 (MQ=255) tGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTcctgcctg > 1:96638/1‑251 (MQ=255) ggAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTcctgcctg < 1:197452/250‑1 (MQ=255) ttCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAACAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGccct > 1:374837/1‑249 (MQ=255) cGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCAGAGTCAGCGCATCCTGCTCATCATCGACAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTACACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATAtt > 1:467184/1‑251 (MQ=255) ttCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACTCAACAAGCGCTCAAGCGGCAGCAGCGACCAGGTGTTGCGTTCACCCGTCGTCCCCGGCAACAATCGTTGGGTTCCTGCCTGCGCCCGCCCGCCATATTGCg > 2:438122/1‑250 (MQ=255) tCGCCAGTTGAATACTTCCGCTGCCTGCCGAGGGCAATGCCTTCACTAACTGACGATGAAGGCCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGt < 1:334442/250‑1 (MQ=255) gCCAGTTGAATACGTTCGATGACTGCCGCTGGCAATGCCATCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCCTCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCTCCAGCACGCCATATTGCTTAc > 1:178360/1‑250 (MQ=255) ccAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACAt < 1:224574/251‑1 (MQ=255) aGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATa > 1:274713/1‑250 (MQ=255) tGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGc > 2:55030/1‑251 (MQ=255) tGAATACGTTCGCTGAATGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGc > 1:415410/1‑251 (MQ=255) aaatccGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACTGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGcc < 1:192403/246‑1 (MQ=255) gcgcggACTGCCGATGGCAATTCCTTCCCAACCTGACGATGCAGCGCTTCGTCCGGCCACATTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGTTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCTTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAAtt < 1:295272/245‑1 (MQ=255) cTGACTGCCGAGGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCATGTGTTGCGTTCACCCGTCGCCCCCGGCAGCACTCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTCCATAACGCCTGCAATTccgg > 2:163265/1‑248 (MQ=255) aTGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCg < 1:197822/174‑1 (MQ=255) aTGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGGTGCGTTCACCCGTCGGCCCCg > 2:197822/1‑174 (MQ=255) gggCAATTCCTTCACAAACTGACGATGCAGCGGGTCAGCCGGCCACAGTATCTGGTGGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCTCCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCCCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTtgctg < 1:421597/250‑1 (MQ=255) gCAATGCCTTCACTACCTGACGAGGCAGCGCGTCACCCGGCCACAGGAGCCGGCTGCCCACCGCCAGCACGGCGTCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGcc < 1:15223/251‑1 (MQ=255) cAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGccc > 1:172719/1‑251 (MQ=255) gCAGCGCGTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGc < 1:117378/251‑1 (MQ=255) cgTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACg > 2:419716/1‑195 (MQ=255) cgTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACg < 1:419716/195‑1 (MQ=255) gTCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTc > 1:35905/1‑250 (MQ=255) tCATCCGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACCCGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCATCGGCCCCGGCAGCAATCGTTGTGATCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCCTTTAGCGGCTGAGTCa > 1:488936/1‑250 (MQ=255) ccGGCCACAGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGCGTCAATGCg > 2:482639/1‑251 (MQ=255) acaGTATCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTc > 1:323836/1‑251 (MQ=255) aGTATCTGGCTGCCCACCGACAGCACGGCGGCGAGATGAGTCAGCGCATACTGCTAATCATCGACAATACAAAACAAGCGCTCACGCGGCAGCAGCGTCCAGGTAGTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGACAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGTCGATTTGCTGCCCATTACCGCAGCGCATTTAGCGGCTGCGTCAATGCGGCTGTCa > 1:38535/1‑250 (MQ=255) | CGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATTGTGCCATCCCGCGCGGCAACTGCTTCACACAATG‑CGCGAAGCTGATCCGAATCACC‑GTGGAAGATCACCGCATCAAACGGTTGAGCGGTTATATTTTCCGCTTTCGCCAGTTGAATACGTTCGCTGACTGCCGATGGCAATGCCTTCACTAACTGACGATGCAGCGCGTCATCCGGCCACAGTACCTGGCTGCCCACCGCCAGCACGGCGGCGAGCTGAGTCAGCGCATCCTGCTCATCATCGGCAATACACAACACGCGCTCACGCGGCAGCAGCGTCCAGGTGTTGCGTTCACCCGTCGGCCCCGGCAGCAATCGTTGTGTTCCTGCCTGCGCCAGCTCGCCATATTGCGTACATAACGCCTGCAATTCTGGACGATTTGCTGCCCATTCCCGCAGTGCATTTAGCGGCTGAGTCAATGCGGCTTTCA > NC_000913/1074996‑1075479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |