Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,593 A→G A419A (GCA→GCG thrA → fused aspartate kinase/homoserine dehydrogenase 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,5930AG98.1% 139.6 / ‑4.5 52A419A (GCA→GCGthrAfused aspartate kinase/homoserine dehydrogenase 1
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (22/29);  total (22/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.48e-01

GCAGCGATGTCACGCGCCCGTATTTCCGTGGTGCTGATTACGCAATCATCTTCCGAATACAGCATCAGTTTCTGCGTTCCACAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACATATCGACTTACGTGTCT  >  NC_000913/1345‑1837
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                    
gCAGCGATGTCACGCGCCCGTATTTCCGTGGTGCTGATTACGCAATCATCTTCCGAATACAGCATCAGTTTCTGCGTTCCACAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACt                                                                                                                                                                                                                                                    <  1:183381/251‑1 (MQ=255)
          cACGCGCCCGTATTTCCGTGGGGCTGGTTACGCATTCTTCTTCCGATGTCAGGATCAGTTTCTGCGGTCCGCAAATCGACTGTGTGCGAGCTGAACGGGGAATGCAGGAAGAGTTCTACCGGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGGCATTATCGCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCTCGCTGGCCCGCGcc                                                                                                                                                                                                                                          <  2:319268/251‑1 (MQ=255)
               gcCCGTATTTCCGTGGTGCTGATTACGCAATCATCTTCCGAATACAGTATCAGTTTCTGCGTTCCGCAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGGGATGGGATGGGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAatat                                                                                                                                                                                                                                     >  1:283040/1‑251 (MQ=255)
                  cGTAGTTCCGAGGTGCTGATTTCTCAATCATCTCCCGAATACAGTAACAGTTTCTGCGGTCCGCAAAGCTACCGTGTGCGAGCTGAGCGGGCAAGGCAGGGAGAGGTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCGCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCaa                                                                                                                                                                                                                                  <  2:5130/251‑1 (MQ=255)
                                gCTGATTACGCATTCATCTTCCGAATACAGTATCAGTTTCTGCGTTCCGCAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGTGATCTCGGCGAAATTTTTTGCCGCGCTGGGCCGCGTCAATATCAACATTGTCGCCAtt                                                                                                                                                                                                                     <  1:189230/250‑1 (MQ=255)
                                gCTGATTACGCAATCAACTTCCGAAGGCAGTATCAGTTTCTGCGTTCCGCAAGGCGACGTGGTGCGAGCGGAACGGGCAATGCAGGAAGAGTTCTCCCTGGATCTGAAAGAAGGCTCACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCGTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTg                                                                                                                                                                                                                    <  2:50197/251‑1 (MQ=255)
                                   gATTACGCAATCATCTTCCGAATACAGTATCAGTTTCTGCGTTCCGCAACGCGACTGTGTGCGAGCTGAACGGGCACTGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGAAGGAACGGCTGGCCATTATCTCGGGGGGAGGGGATGGTTAACGCACCATGCGGGGGAACACGGCGAAATTCTTTGCCGGGCTGGCCCGCGCCAATATCCACAATGTACCCATTGCTc                                                                                                                                                                                                                 >  2:224212/1‑251 (MQ=255)
                                    aTTACGCAATCATCTTCCGAATACAGTATCAGTTTCTGCGTTCCGCAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCACCCTTGTCGCCATTtctcc                                                                                                                                                                                                                >  1:216865/1‑250 (MQ=255)
                                               atcTTCCGCATACAGTATCAGTTTCTGCGTTCCGCAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGGAGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGGATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTTCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGAtcttatg                                                                                                                                                                                                     >  1:232817/1‑248 (MQ=255)
                                                                 caggttCTGCGTTCCGCAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCg                                                                                                                                                                                   <  1:129368/247‑1 (MQ=255)
                                                                   gTTTCTGCGTTCCGCAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCCGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCAATATCTCGGTGGTGGGGGGTGGTATGCGAAACTTGCGTGGGTTCTCGGCGAAATTCTTTGCACCGCATGCCCGCGCCACAATCAACATAGTTGCCCTTTCTACGGGGTCTTTTGCACGCCCAATCTCTGTtgtg                                                                                                                                                                                 >  2:145162/1‑251 (MQ=255)
                                                                             cccgcaAAGCGGCTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTAGCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCACTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACg                                                                                                                                                                       <  1:169415/247‑1 (MQ=255)
                                                                                        aCTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGAcc                                                                                                                                                            <  1:481842/251‑1 (MQ=255)
                                                                                               tgCGAGCTGAACGGGCAATGCAGGACGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGAtct                                                                                                                                                                                                         >  1:136147/1‑200 (MQ=255)
                                                                                               tgCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGAtct                                                                                                                                                                                                         <  2:136147/200‑1 (MQ=255)
                                                                                                  gAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTTAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCCACCACTGGCGTg                                                                                                                                                   >  1:303873/1‑251 (MQ=255)
                                                                                                    gCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTgcg                                                                                                                                                 <  1:170842/251‑1 (MQ=255)
                                                                                                       gAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTg                                                                                                                                                                                                     >  1:92941/1‑196 (MQ=255)
                                                                                                       gAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTg                                                                                                                                                                                                     <  2:92941/196‑1 (MQ=255)
                                                                                                        aaCGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGtt                                                                                                                                             <  1:70311/251‑1 (MQ=255)
                                                                                                        aaCGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACGGGGGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGtt                                                                                                                                             <  2:211457/251‑1 (MQ=255)
                                                                                                         aCGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTa                                                                                                                                            <  1:258914/251‑1 (MQ=255)
                                                                                                              cAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACCGAACGGCCGGCCCTTATCTCGGTGGTAGGGGATGGTATGCTACCCCTTCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCCCCAATATCAAAATTGTCCCCATTGCTCAGGGGCCTTCTGGACGCTCAATCTCCTTCGCGGGAAATAACGATGATGCACCCACTGGCGTGCGGGGTACtcac                                                                                                                                       >  2:104476/1‑250 (MQ=255)
                                                                                                                         gagTTCTACCTGGAACTGAAAGAAGTCTTACTGTAGCCGCTGGCTGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGTGATCTCGGCGAAATTCTTTGCCGCGCTGGTCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCGGGCGTGGTAAATAACGATGATGCGTCCACTGGCGTGCGCGTTACTCATCAGATGCTGtt                                                                                                                            <  1:163130/251‑1 (MQ=255)
                                                                                                                                   tGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACCGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCgtt                                                                                                                  >  1:429785/1‑249 (MQ=255)
                                                                                                                                    ggAACTGAAAGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGAt                                                                                                                  <  1:443914/250‑1 (MQ=255)
                                                                                                                                           aaaGAAGGCTTACTGGAGCGTCTGGTGGTTACGTGACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGTGAAAGTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGACGATGCGACCGCTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTAt                                                                                                          <  2:327912/251‑1 (MQ=255)
                                                                                                                                           aaaGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGtt                                                                                                                            <  2:404845/233‑1 (MQ=255)
                                                                                                                                           aaaGAAGGCTTACTGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGGGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGtt                                                                                                                            >  1:404845/1‑233 (MQ=255)
                                                                                                                                                       cgggaggttctgggggtgcgggAAGGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCTCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCGTCTGAACGCGCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGGGCGCGTTACTCATCAGATGCTGCTCAATTCCGATCAGGTGATCGAAGTGTTtgt                                                                                              <  2:66902/231‑1 (MQ=255)
                                                                                                                                                        tGGAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGGTGGTATGCGCACCTTGCGGGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATCACGATCAGGTTATCGCAGTGTTtgtg                                                                                             >  2:6229/1‑251 (MQ=255)
                                                                                                                                                         ggAGCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTTCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGGGGGCGCGGTTCTCCTCAGGTGCTTTTTAATACCGATTAGGTTATCGAAGGGTTtgtgg                                                                                            >  2:144133/1‑250 (MQ=255)
                                                                                                                                                          gggcctcTGGCGGTGCCGGACCGGCGGGCCAGTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTTGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGTCGTGCGAGTTACTCATCAGATGCTGTGCAATACCGAGCAGGTTATCGAAGTGTTTGTGAt                                                                                           <  2:176575/245‑1 (MQ=255)
                                                                                                                                                            gCCGCTGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGaa                                                                                                                                                                                                   >  1:258610/1‑145 (MQ=255)
                                                                                                                                                            gCCGCGGGCGGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCGGGCCCGCGCCAATATCAACATTGTCGCCAGTGCTCAGGGATCTGCTGaa                                                                                                                                                                                                   <  2:258610/145‑1 (MQ=255)
                                                                                                                                                               gcgggcggTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTTTGATTGGCg                                                                                      <  2:283040/244‑1 (MQ=255)
                                                                                                                                                                  ggacgTGACGGAACGGTGGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCg                                                                                   <  2:303970/247‑1 (MQ=255)
                                                                                                                                                                    cggTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTTATTGGCGTCggg                                                                                 >  2:172939/3‑250 (MQ=255)
                                                                                                                                                                       tGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCAACTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGACAGCGCCAATATCAACATTGTCGCCATTGCGCAGGGATCTTCTGAACGCTCAATCTATGTCGTGGTAACTAACGGTGATGCGTCAACTGGCGTGCGCGTAACTCATCAGATCCTATTCAATACCGATCAGGTTATCGACGTGTTTGTGTTTGACGTCAGTgac                                                                              >  2:438963/1‑249 (MQ=255)
                                                                                                                                                                          cGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGGGTTTGGGATTGGCGTCGGTGGCGtt                                                                           >  2:143221/1‑251 (MQ=255)
                                                                                                                                                                           ggAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTg                                                                          >  1:215225/1‑251 (MQ=255)
                                                                                                                                                                           ggAACGGCTGGCCATTATCTCGGTGGTAGGCGATGGTATGCTCACCTTGCGTGGGATCTCTGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCACCCTTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATTCGACCACTGGCGTGCGCGTTACTCATCCGATGCTGTTCAATACCGATCAGGTTATCGATGTGTTTATGATTGTCGTCGGTTGCGTTg                                                                          >  2:128437/1‑251 (MQ=255)
                                                                                                                                                                                  cTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGAGATTGGCGTCGGTGGCGTTGGCggagc                                                                   >  2:346263/1‑248 (MQ=255)
                                                                                                                                                                                                       ggTGATGGTATGCGCACCTTGCGTGTGATCTCGGCGCAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGCTCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATCCCGATCAGGTTATCGAAGTGTTTGTGATTTGCGTCGGTGGCGGTGGCGGTGCGCTGCTGGAGCacatggagcg                                              >  2:3115/1‑242 (MQ=255)
                                                                                                                                                                                                         tGATGGTATGCGCACCTTGCGTGGGATATCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGGGCGCTGCTGGAGCAACTGAAGCGTc                                            >  1:444020/1‑251 (MQ=255)
                                                                                                                                                                                                             ggTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCaaca                                        <  1:371728/251‑4 (MQ=255)
                                                                                                                                                                                                              gtctGCGCTCCTTGCGTGGGAGCTCGGCGAAATTCTTGGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCGCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGAGGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATGGGCGGCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTcaacaa                                       <  2:304401/248‑1 (MQ=255)
                                                                                                                                                                                                                            gCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAACAAAGCTGGCTgaag                           <  2:215225/250‑1 (MQ=255)
                                                                                                                                                                                                                            gCGTGGGATCTCGGCGAAATTCTTTGCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAACAAAGCTGGCTgaag                           <  1:40036/250‑1 (MQ=255)
                                                                                                                                                                                                                                            aaaTTCTTTGCCGCGCTGGCCCGCGCAAATTTCAACATTGGCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCACTGTCGTGGTAAATAACGAGGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGCGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTTGAGCAACTGAAGCGTCAACAAAGCTGGCTGAAGAATAAACATATCGACtt          <  2:209783/251‑1 (MQ=255)
                                                                                                                                                                                                                                              aTTCTTTGCCGCGCTGGCCCGCGCCAATAGCAACATTGTCGCCATTGCTCAGTGATCTTCTGAACGCTCAATCTCTTTCGTGGTAAAGAACGATGATGCGACCTCTGGCGTGCGCGTTACTCATCAGAGGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGTCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAACAAAGCTGGCTGAAGAATAAACATATCGACTTAc        <  1:330555/251‑1 (MQ=255)
                                                                                                                                                                                                                                                     gCCGCGCTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAACAAAGCTGGCTGAAGAATAAACATATCGACTTACGTGTCt  <  1:143221/250‑1 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                    
GCAGCGATGTCACGCGCCCGTATTTCCGTGGTGCTGATTACGCAATCATCTTCCGAATACAGCATCAGTTTCTGCGTTCCACAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACATATCGACTTACGTGTCT  >  NC_000913/1345‑1837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: