| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 811,721 | 0 | T | G | 44.3% | 46.5 / 15.3 | 62 | V67G (GTG→GGG) | bioC | malonyl‑acyl carrier protein methyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (8/26); new base G (24/3); total (33/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.64e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TAACCGCTGCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGC > NC_000913/811471‑811969 | aaacccgcgggcgtGAAAGGCAGGTTGTCGCCCGTCTCGTGGGGGTGCTGCAGGGCAACGGTTAATAAA‑CAAGCCATTGCGGCGGCATG‑TGGTCGGGCAGCCGCACACAATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGTCTTACTGGCAATGCTTCCACAGCTTAAATACACCCACGTACGGGACGCGGGGTGGGGACCTGGGTGGATGAGCCTCCACTGGCGGGAAC‑GGC‑ACGCGCAGGt < 2:453818/238‑1 (MQ=255) ccgtggccaataaaaggCAGGATACCGCCGGTCGGCTGGGGGTGCTGCATGGCAACGTTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTGCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGAc < 2:430337/235‑1 (MQ=255) gcATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTa < 1:308558/251‑1 (MQ=255) atCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCaa < 1:421051/251‑1 (MQ=255) ccgcccGTCTGCTGGGGGTGCTGCAGGGCAACGGTTAATAAA‑AAAGCAATTGCAGCGGCATT‑GGGTCGGGCAGCCGCACACTATGAGCAACATGCAAATCTACAGCGCCAGAGTGCGGACGCCTTACTGGAAATGCTTCCACAGCGTAAATACCCCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAAt < 1:137218/247‑1 (MQ=255) cGACCGTCTGCGGGAGGTGTTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATg < 1:463803/251‑1 (MQ=255) aCCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAA‑GCC‑GCGCGCAGGTGGAGGCC‑TTTGAACTCCc‑gcccccccaact > 2:340806/1‑242 (MQ=255) cggctgGAGGTGTTGCATGGAAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATGCACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTc < 1:407600/249‑1 (MQ=255) gctgGAGGTGCTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGAGGCCTT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGAAATGCTTCAACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGGGCAGAGGACGGGC‑CTAGAACTCTc‑cccgcacaagctttttca > 1:23301/1‑237 (MQ=255) tgGAGGTGCTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAG‑GTC‑ACGCGCGGGGGGCGGGC‑TTCGAACTCTC‑GCCGCCAACGCTTGtttcggc > 2:344297/1‑246 (MQ=255) ggAGGTGCTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGGCGGCCCTTA‑ATCTTTC‑GCCGCCAATGCTTTTTCAGGcc > 1:476228/1‑250 (MQ=255) gAGGTGCTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GGC‑ACGCGCAGGGGACGGGC‑GTAGATCTCTC‑CCCCCCAATGCTTGTTCAGGCAc > 1:448555/1‑251 (MQ=255) tgctgcATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCCCTGGCGGGAAC‑GTC‑CCCCGGCGGGGGCGGCC‑TTCTCTCTCCC‑GCCGCCAATGCTTGTTCAGGCTCGccc > 2:15732/1‑250 (MQ=255) tgctgcATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGGAC‑GTC‑ACCCGGAAGGGACGGCC‑TGAGAACTTTC‑ACCGCCCATGCTTTTTCCGGGACGcc > 1:108745/1‑250 (MQ=255) tgctgcATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGGAC‑GTA‑AGGCGCAGGGGACGGCC‑CTAGATCTCTT‑GCCGCCAATTCTTGGTTAAGCACGccc > 1:19407/1‑250 (MQ=255) gctgcATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATCCACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAg < 1:44331/251‑1 (MQ=255) aTGGCAACGGTTAATAAA‑CAGGCCATTGCAGCGGCATT‑TGGCCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTTCGGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGa < 1:206448/251‑1 (MQ=255) aaCGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCCATGCTTGTTCAGGCACCCCCGAAGGATGccc > 1:207251/1‑250 (MQ=255) ggaaataaAGCAAGCCATGCCAGCGG‑ATTATGGCCGGGCGGCGGCGCACTATGAGCAACATCAAGATCTCCAGCGCCAGAGTGCTGCCGCCGTACTGGCAAGGCTCCCAACGCGTAAATCCCCCCACGTCCGGGACGCGGGTTGGGGCCCAGGCGGGAGGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAg < 2:101633/248‑1 (MQ=255) gTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACCTGCAGCTCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTCAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGCAAC‑GCC‑ACGCCTCGGTGGGGGCC‑TTAGCTCT‑TCAGCCGCCCACGCTTGTTCAAGCAcacccgcagggtgccgact > 2:55801/1‑232 (MQ=255) aaa‑CAAGCCATTGCAGCGGCTTT‑TGGTCGGGCAGCCGCACACTAGGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTa < 1:314400/251‑1 (MQ=255) aaa‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTCCACG‑GCAGGGGACGACC‑TTATATCTCTT‑GCCGTCAAAGCTTGTTCAGGCACGCCAGAAGGAGGCCGAAGAcccatt > 1:9652/1‑247 (MQ=255) tGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCTTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GGC‑CCGCGCAGGGGACGGCC‑TTAGAACTCTC‑GCCGCCACTGCTTGTTTCGGCACGCCCGAAGGATGCCCCAGACCACTATCTgggggg > 1:66527/1‑249 (MQ=255) gCGGCATG‑TGGGCGGGAAGCCGCACACTATGAGCAACATGCAGATATACAGCGTCAGAGTGCTGACGCTTTACTGGCAATGCTGCCACAGCGTAAAGACACCCACGTCCTGGACGCGGGTGGTGGACCGGGCGGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGatac < 2:154202/251‑2 (MQ=255) cGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAA‑GGC‑ACGCGCCGGGGACGGCC‑CTAGATCTCTC‑GCCGCCCATGCTTGTTCCGGCACGCCCGAAGGAAGCCGCCGACCCATATCTGGCGGGGGataa > 1:344622/1‑249 (MQ=255) gTCGGGCAGCCGCACACTATGAGCAACATGCAAGTCTACTGCGCAGGAGTGCTGACGCCTGACTGGAAATGTTCCCACAGCGTAAAGCCCCCCACGTACTGGACGCGGGTGGTGGACCTGGCGGGAGGGGCCGCCCCTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATACCGAATCCCTg < 2:251846/251‑1 (MQ=255) cAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCCATGCTTGTTCAGGCACCCCAGAAGGATGCCGCAAACCCTTATCTGGCGGGAGATATCGAATCCCTGCC‑Gtt > 1:261282/1‑250 (MQ=255) ccGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTCCTGGCATTGCTTCCACAGCGTAAATACACCCACGTCCTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCCC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCg < 1:349716/251‑1 (MQ=255) acacTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAAGATGCCGCAGACCATTATCTGGCGGGGGGTATCGAATCCCTGCC‑GTTAGCGAccg > 1:15395/1‑249 (MQ=255) acTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGGGATATCGAAAACCTGCC‑GGTAGCGACTGCg > 1:502107/1‑251 (MQ=255) tATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCCCCAATGCTTGTTCAGGCACCCCAGAAGGAAGCCGCAGACCATTATCTGGCGGGGGGAATCGAAACCCCGCC‑CGTAGCGACTGCggc > 1:467164/1‑249 (MQ=255) aaccTACGGCGCCAGGGTGCTGACGCCTTACTGGCAATGCTTCCCCAGCGTAAATCCCCCCACGTACTGGACGCGGGTTGTGGACCGGGCTGGAGGGGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATg < 1:498692/248‑1 (MQ=255) tACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTCCTGGCCGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTA‑ACGCGCCGGGGACGCCC‑CATGTTCTTTT‑GCCCCCCATGCTTGTTCAGGCAACCCCGAGGGATGCCGCAGACCATTTTCTGGCGGGGGAGATCGAATCCCCGCC‑GGTAGCGAcggccgcgctcgctgttcctgggggc > 1:344791/1‑226 (MQ=255) aCAGCGCCAGATTGCGGACGCCTTACTGGCAATGTTTCCACAGCGTAAATACCCCCACGTACTGGACGCGGGTTGTGGCCCGGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCa < 1:151917/251‑1 (MQ=255) ccgttACTGGAAATGCTTCCACAGCTTAAATCCACCCAGGTCCTGGACGCGGGTTGTGGCCCTGGCTGGATGAGCCGCCACGGGCGGTAAC‑GTC‑ACGCGCAGTTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCAAGAAGGATGCCGCAGACCATTATCTGGCGGGATATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAgtggtg < 1:401112/248‑1 (MQ=255) cTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCCATGCTTTTTCAGGCACGCCCGAAGGATGCCGCAGACCATTTTCTGGCGGGAGGTATCGGATCCCTTCC‑GTTAGCGACTTCG‑ACGTTCGATCTTGCAAGGGGCAATCTCccagtgcaggggggcg > 1:445948/1‑244 (MQ=255) cggccAATGCTTCCACAGCGTAAATCCCCCCACGTACTGGACGCGGGTTGTGGACCGGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCT‑TTAGATCTCTC‑GCCGCCAATGCTTTTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTaa < 1:371225/247‑1 (MQ=255) gCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGCGGTGCGGTAATTTATccc > 1:375235/1‑250 (MQ=255) cTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCCTTATCTTGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTTCG‑GCGGTCGGTCTTTCATGGAGCAATCTCCCAGTGCCGTGGTGCGGGAATTTATTCAc > 1:360139/1‑251 (MQ=255) acCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGCAC‑GGC‑ACGCGCAGGGGACGGCC‑CTTGATCTCTC‑GCCGCCCATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCCGAACATTATCTGGCGGGGGATATAGAAACCCCGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCCGGGGTGCGGGAATTTATCCACGGCCCTCCGCGAGCTGt > 1:283092/1‑250 (MQ=255) tACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACAGCC‑A‑GCGCAGGGGACGGCC‑CTTTATCTCTC‑GCCGCCAAAGATTTTTTCGGCACGCCCGAGGGATGCCGCAGACCCTTTTCTGGCGGGGGATATCGAAACCCCGCCCGTT‑TCGCCCGCG‑CCGTTCGCTCTTTCTTTGCGCAATATCGCAGCGCCGTGGTGCGGGAAGTTCTTCACGGCACTCcgccgcctgctgccgggg > 2:3891/1‑236 (MQ=255) aCTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GGC‑AAGCCCAGGAGACGGCC‑TTAGAACTTTC‑CCCGCCAATGCTTGATCCGGGCCGCCAGAAGGAAGGCGCAGACCATTATCTGGCGGGAGATATCGGATCCCTGCC‑GCTAGAAACCGCGGAGGTT‑GATCTTGAATGGTGCAATCTCGCCGTGCAGCGGGGCGGGAATTTATCCACGGGACTCCGCGAGGTGTATTgggggg > 1:215558/1‑248 (MQ=255) cgggccgcgGGTGGTGGCCCGGGCTGGAGGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCT‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGggtggt < 1:175092/246‑1 (MQ=255) ggcctcgGGTTGGGGCCTTGGCGGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGggtggt < 1:429560/244‑1 (MQ=255) gggTTGTGGACCTGGTGGGATGAGCCGCCCCTGGCGGGACC‑GTC‑CCGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCa < 1:371492/251‑1 (MQ=255) gTTGTGGACCTGGCTGGTGGAGCCGCCACGGGCGGGAAC‑GTC‑ACGCGAAGGTGACGGCA‑TTAGATCTCCC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCaaa < 1:213902/251‑1 (MQ=255) gTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTCCC‑GTTAGCGACTGCG‑ACGTTCGGTCTTGCATGGAGCAATCTCGCAGTGCAGTGGGGGGGGAATTTTTCCACGGCACTCCGCGGGCTGTATTGGGGGGGGCGCCCCaa > 1:491961/1‑250 (MQ=255) gggcgtggctgggaggggccgccACGGGGGGGACC‑GTC‑ACGCGCAGGGGCCGGCC‑TTGGACCCCTC‑GCCGCCAATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCg < 2:467164/234‑1 (MQ=255) accaggctggATGAGCGGCCCCTGGCGGGACC‑TTC‑TCGCGCAGGTGCCGGCT‑TTAGATCTCTC‑GCCGCAAATGCTTGTTCAGGACCGCCAGAATGATGCCGCAGACCATTATCGGGCGGGAGATATCTAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACGCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTgg < 1:195069/247‑1 (MQ=255) ctggATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCCATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGGTATCGAATCCCTGCC‑GTTAGCGACTGCG‑GCGTTCGATCTTTCATGGGGCAATCTCGCCGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGGGCTGTATCGGGTGGTGCGCCCCCAAGGCGTGGTcgcgg > 1:23046/1‑250 (MQ=255) ctggATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCCGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTTGCGACTGCG‑GCGTTCGATCTTGCCTGGAGCAATCTCGCCGTGCAGTGGTGCGGGAATTTATCCACCGCCCTCCCCGAGCTGTATCGGGGGGTGCGCCCCAAAGGCGTGGTcgccg > 1:68169/1‑249 (MQ=255) gAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGGGACGGCC‑TTTGATCTCTC‑GCCGCCCATGCTTGTTCAGGGACGCCAGGAGGATGCCGCCGACCCTTATCTGGCGGGAGATATCGGAACCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCCTGGAGCAATCTCGCAGTGCAGTGGTGCGGGAATTTTTCCACGGCACTCCCCGGGCTGTATCGGGGGGTGGGCCCCCCAAGCGTGGGCGCGGTTAccc > 1:501177/1‑250 (MQ=255) cccccccACGGGCGGGAGC‑GGC‑GCGCGTAGGTGACGGCC‑TTAGATCCCTC‑GCCTCCATTGCTTGTTCAGGCCCGCCAGAAGGATCCCGCAGACCATTATCTGGCGGGATATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCAc < 2:344791/246‑1 (MQ=255) caggggCGGGACC‑GTC‑ACGCGCGGGTGCCGGCT‑TGAGACCCCCG‑GCCGCAAATGCTTGTTAGGGCACGCCAGAAGGATGCCGCAGACAATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGTAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGt < 2:157492/247‑1 (MQ=255) ccggggtggaaagggcccgcgCAGTGGACGGCC‑TTAGATCTCTC‑GCCCCCAATGCGTGTTCAGGCACGCCAGAAAGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGt < 2:412303/234‑1 (MQ=255) cGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCACTCTCGCAGTGCAGTGGTGCGGTAATTTATCCACTGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCACAGGCATGGTAGCGTTTCCCCCGCTGGTgacggg > 2:146647/1‑246 (MQ=255) gggAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑GCGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAATGCGTAGTCGCGTTTACCACGCTGGTGCAggg > 2:338541/1‑250 (MQ=255) aaC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCCCGCTGGTGCAGTGATCg > 1:471674/1‑251 (MQ=255) cc‑GTC‑GCGCGCTGGTGAGGGCC‑TTAGACCCCCC‑GCCGCAAATGCTTTTTCAGGCACGCAAGAAGGATCCCGCAGCCCATTATCTGGCGGGAGATATCGAACCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGt < 2:395420/250‑1 (MQ=255) c‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGtt < 1:344297/251‑1 (MQ=255) cgcgCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCg < 1:43298/251‑1 (MQ=255) aGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCATGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGGGCAGGGATCGTTACCCGACCTg > 2:295667/1‑251 (MQ=255) gTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGc > 1:356445/1‑250 (MQ=255) | TAACCGCTGCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAA‑CAAGCCATTGCAGCGGCATT‑TGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAC‑GTC‑ACGCGCAGGTGACGGCC‑TTAGATCTCTC‑GCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCG‑ACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGC > NC_000913/811471‑811969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |