| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 300,126 | 0 | A | G | 36.4% | 49.2 / 10.9 | 46 | L270P (CTC→CCC) | paoC | aldehyde dehydrogenase: molybdenum cofactor‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base A (7/21); new base G (13/3); total (21/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.68e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGGCGCACGCATGGCGTTCCCTTCCGGCAAA‑TCAAGCGTGGCG‑AGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCC > NC_000913/299879‑300371 | gggccccagcaTGCCGTTCCTCTCCGGCAAA‑TCAGGGGTGGCG‑AGCCGCTGGCCGGTATGCCGATGCGCCCCGGCGTAGAGTATTTCGCTTTGTTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTGGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGTCTGGGGAGCa < 1:376400/243‑1 (MQ=255) cgcaTGGCGTTCCCTTCCGGCAAA‑TCAAGCGTGGCG‑AGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGGGCGTGGGGTTATTGGGTATAGAGGGGCGGGGGAGcgttaactt > 1:270317/1‑243 (MQ=255) gtttccTTCCGGCAAAATCAAGCGGGGGG‑ACCCGCGGCCCGTTATGACGATCCGCCCCGGGGTAGAGTAATTCGTTTTGTTGTCCCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTCCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGa < 1:176116/247‑1 (MQ=255) gcgtcccctgccgaaaaataagggTGGCGGAGCCGCAGGCCGTTTTGACGATTCCCCCGGGCGTAGAGTATTCCGCTTTGGTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑gg < 2:255333/228‑1 (MQ=255) gTTCCCTTCCGGCAAA‑TCAAGCGTGGCG‑AGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGGATAGAGGGGCGGGGGAGCCTCA‑C‑TTT‑AAcccg > 1:160609/1‑247 (MQ=255) tCCCTTCCGGCAAA‑TCAAGCGTGGCG‑AGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGCGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGGACCA‑C‑TTT‑AAAC‑GGACGt > 1:419510/1‑251 (MQ=255) aaa‑TCAAGCGTGGCG‑AGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGGGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGCAT‑A‑CATTT‑AACC‑GGGCGGTTCAACGcccc > 1:431045/1‑248 (MQ=255) a‑TCAGGCGGGGCG‑GGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCACCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATAGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCggg < 1:168714/251‑1 (MQ=255) aGCGTGGCG‑AGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCCCCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGCATCC‑C‑TTT‑TACC‑CGAccgttcccccctcggggggc > 2:364141/1‑232 (MQ=255) gCG‑AGCCGCGGGCGGGTATGACGATCCGCCCCGGCGTAGAGTAATTCGCTTTTCTTTCCCGCCGTTTCGGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGgc < 1:406089/251‑1 (MQ=255) cAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGGAATA‑C‑TTT‑TAAC‑GGACGGTTTACCGCCCGGGGGGCGGGGgccgcccgcg > 1:59183/1‑247 (MQ=255) gCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGCCTCC‑C‑TTT‑AAAC‑GGACGTTTCCCCGCCCGGGCGGGGGGGGGCGCCAGCAgcg > 1:83217/1‑251 (MQ=255) gATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGCATCA‑C‑TTT‑AACCCGGA‑GGTTCACCGCTCGGGGGGCGAGGGCCGGCAGCAGCGCCTCGCTtctc > 1:376766/1‑251 (MQ=255) ccgggCGTAGAGTAGTCCGTTTTGTTGTCCCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACa < 1:428620/248‑1 (MQ=255) cccGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGCATCA‑A‑TTT‑AAAC‑GGACGGTTCACCGCGCTGGCGGGGAGGGGCGCCCACAGAGCATAGCTTCCCAgggac > 1:112573/1‑247 (MQ=255) cccGGCGTAGAGTAATCCGCTTTGCTGTTCCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTGCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACa < 1:265485/251‑1 (MQ=255) gcggagagTAATTCTCTTGGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCtt < 2:59183/247‑1 (MQ=255) ggtgtgttatttctcttggCTGTCCCGCCGTTTCCGGTGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCTGTGATTTTCCCGCTCTGGTCGGCACCGTGACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTg < 2:296113/233‑1 (MQ=255) gttgagTAATTCTCTTGGCTGTCCCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGGGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTgc < 2:43487/248‑1 (MQ=255) agagTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGGATAGAGGGGCGGGGGGGGCTCA‑C‑ATT‑AAAC‑CGACGGTTCCCCCCTCGGGCGGGGGGGGGCGCCAGCAgcgccccgccttcccgggacaagctggcc > 2:98158/1‑226 (MQ=255) cGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGGGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑A‑TTT‑AAAC‑GGACGTTTTACCGCTCGGGGGGGGAGGGCCGCCAGCAGGGCATCGCTTCTCAGGAAAAGCTTGCC‑GCCaaaaccc > 1:400153/1‑247 (MQ=255) ttgggggtgccgcagTTGCCGGCGTGCGGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTCCCCGCTCTGGGCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCTAAACCCTcc < 2:204271/241‑1 (MQ=255) gtcccgccgTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGa < 1:8520/246‑1 (MQ=255) ccgccgTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTAGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGAGTAGTGTTCTTGGGCATAGCGGGGCGGGGGCGCCTTA‑C‑CTT‑AACC‑GGACCTTTCAACGCACGGGCGGCCAGTGCACCCCGCGGCGCCTAGCTTCTCAGGAACATCTTGCC‑ACCAAACCCTCCGCCGATATAc > 1:59776/1‑251 (MQ=255) ccgccgTTTCCGGCGGGCCGCCGGGCGGTTTTCCAGCCCAGTTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGGCGGCCCCGATACGCAAGGGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATAc < 1:314062/251‑1 (MQ=255) gTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGCATCC‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCCGCCGCGCATc > 1:351917/1‑194 (MQ=255) gtgccgGTCATGTTTCCAGCCCAGCTGTGATGTGAGAGAGTGGGGATTGCTCCGCTGGTGTCGGCCCCGATCCGCATGGGCTGAGGGGGGGCGGGGCGGTGCGTGGTGTGATGGGGAATGGGGGGGGGGGGGAGCATCC‑C‑TTT‑ACCC‑GGACGTTCCCCCGTGCGGGGGGCGAGGGCGGCCAGCAGCGCAGCGCTTCTCAGGAACGGCCTGCC‑GCCAAACCTACCGCCGATATACGGGGAGATAATACGcac < 2:119266/249‑1 (MQ=255) gtcTTTCATGTGAGATGGGGGGGATTTCCCCGCTCTGGTCGGCCCCTATACGCAAGTGCTGAAGGGGGGCGGGGCGGTGCGTGGTTTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGc < 1:250556/249‑1 (MQ=255) cATGTGAGATAGCGGTGATTTCCCCGCTCGGGCCGGCCCCGTTACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGtttt < 1:175155/250‑1 (MQ=255) aTAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATTC‑C‑TTT‑AACC‑GGACGGTTTACCGCTCGGGGGGCGAGGGCCGCCCACAGCGCATCGCTTCTCAGGGAAAGCTTGCC‑CCCAAACCCCCCGCCGGTATACGGGGAGATAAAACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGcc > 1:137860/1‑246 (MQ=255) ttttCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGCATAA‑C‑TTT‑AACCCGGA‑GTTTTACCGCTCGGGGGGCGAGGGACGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATTATACGCACATT‑CTCCCCGGGGACTTTCAGCGGTTTTGCCCGAA‑CGGTGGGGCAc > 1:238851/1‑251 (MQ=255) gTCGGCACCGATACGCAAGTGCTGAAGGGCGGCGGGGCGGTGCGTGGGGTTATTGGGAATAGAGGGGCGGGGGGGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGGGGCGAGGGCCGCCAGCAGCGCCTCGCTTCTCAGGAACAGCTTGCCCGCCAAACC‑TCCGCCGAAAAACGGGGAGGTAATAAGCACATT‑TCCCACGGGAACTTTCAACGTTTTTGCCAGATACGG‑GCGGCAACAGTCAATCATCt > 1:132018/1‑251 (MQ=255) gggctccggtacgccgttGCTGAGGGGTGGGGGGGCGGTGCGATGTGTTTTGGGGAATAGCGGGGGGGGGGGGCCTCC‑C‑TTT‑AACC‑GGCCTTTTCACCCCTCGGGCGCCGGGGGCCGCACGCCGCGCTTCGCTTCTCAGGAACTGCTTGCC‑TCCAAACCCGCCGCCGATATACGGTGAGATAATGCGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGTTGCGGCACCAGTCCATCTTCTGa < 2:441396/234‑1 (MQ=255) gCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGCATCC‑C‑TTTTAACC‑G‑ACGTTTCACCGCCCCGGGGGCGAGGGCCGCCCGCAGCGCATCGCTTCTCAAGAACAGCTTGCC‑GCCAAACCCCCCGCCGATTTACGGGGGGATAATACGCACCAT‑CTCCACAGGAACATTTAACGTTTTTGCCCGAT‑CGGTGCGGCACCCGGCAATCATATGAtt > 2:382004/1‑251 (MQ=255) gCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGATATTGGGACTAGAGGGGCGGGGGGGCAACAAC‑TTT‑A‑CC‑GGACGTTTCACCACCCCGGGGGCGAGGGGCCCCAACAGCGCATCGCTTCTCAGGAAAAGCTTTCC‑GCCCCACCCCCCGCCGCTAAGAGCGGGCATACTACGACCATT‑CTCCACGGGGACCTTTAGCGTGTTTGCCAGAA‑CGGGGCGGCACCCGTCAGACATCTGAtt > 1:226258/1‑251 (MQ=255) aCCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGGTATTGGGAATAGAGGGGCGGGGGGGCATCA‑C‑ATT‑AAAC‑GGGAGGTTCAACGCTCGGGCGGAGAAGACCGCCCGCAGCGCCTCGCTTTTCCGGAACAGATTGGC‑GCCACACCCTCCGCCGGTATAAGGGGAGATAAAAATCAAATTATTCCA‑GGGAACTTTCAGAGGTTTTGCCCTAT‑AGGGGCGGCACcaatcaattaactggtttt > 1:329493/1‑240 (MQ=255) ccGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGGCGTTTCACCCCTCGGGCGGCGAGGGCCGCCAGCAGCGCAACGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCCCCCCCGCTATACGGGGGGATAATACGCACCAT‑CTCCACGGGAACTTTTCGCGGTTTTGCCAAAT‑CGGGGCGGCCCCCGTCAATCATCTTATTTgg > 1:307789/1‑250 (MQ=255) cgcatgggtggaggggggggcggtgggTGCGGGGTGTTATAGGGAATGGGGGGGGGGTGGCTCATCA‑C‑TTT‑GACG‑GGCTGTTTACCCGCTGGGGCGGGGATGCCCGCCAGTAGAGCCTCGATGCTCAGGAACGGCTTGAC‑GCCAAACCCTCCGTCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGCCCa < 2:141329/226‑1 (MQ=255) ggtgcggaggggggggggggcggTGGGGGGGGTTATTGGGAAAGGGGGGGGGGGGGGGCATCA‑C‑TTT‑AACC‑GGGGGTTTCACCGCGCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTGCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAgg < 2:83217/235‑1 (MQ=255) ggagggggggcggggcggTGGGTGGTTTTATTGGAAAGAGAGGGGGGGGGGAGACTCC‑C‑TTT‑AACC‑GGGCGTTTCCCCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGTGTCTCAGGAACAGTTTGCC‑GCCAACCCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTGTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAg < 2:400153/243‑1 (MQ=255) ggaaggggggggggggggggggtggggTTATGGGTAATAGAGGGGGGGGGGGGC‑TAA‑CCTTT‑AACC‑GGCTGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATAGCTTCACAGAAACAGCTTGCA‑GCAAAACCATCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAg < 2:326180/230‑1 (MQ=255) gggggggcggTGCGTGGTGTTATTGGGAATAGGGGGGCGGGGGAGCATCA‑C‑TTA‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTc < 1:230275/248‑1 (MQ=255) gCGTGGTGTTATGGGGAATAGGGGGGCGGGGGAGCATCC‑C‑TTT‑AACC‑GGACGTTCCCCCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGAc < 1:403302/250‑1 (MQ=255) ggaaggggggggggggggAGCATCT‑C‑TTA‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGTCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAACCCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATg < 2:195188/243‑1 (MQ=255) aatgggggggCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCCCCGCCCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCg < 1:140162/245‑1 (MQ=255) gggggAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACAGCCATCGAGGCATGCGGCTCCATCGcc > 2:340615/1‑251 (MQ=255) | GGGCGCACGCATGGCGTTCCCTTCCGGCAAA‑TCAAGCGTGGCG‑AGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCA‑C‑TTT‑AACC‑GGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCC‑GCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATT‑CTCCACGGGAACTTTCAGCGTTTTTGCCAGAT‑CGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCC > NC_000913/299879‑300371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |