Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1411925	1434983	23059	29 [0]	[8] 9	[ttcA]–ynaM	[ttcA],intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,kilS,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH5,lomR,stfR,tfaR,pinR,ynaE,ynaM

TTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCG  >  NC_000913/1434959‑1435233                          |                                                                                                                                                                                                                                                          ttGTTTAGTTTGTATTGTTCGTTCTTACTAAGTTCGTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAAGCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTGGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCa                           <  2:52715/250‑1 (MQ=255)   gTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGAGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAACACCTTTGCGAAATGAATCAAAAAACCCGCAGCAATGTGCGGGCGATAGTGTCAGCGCACaaacaacacagcggaccc                        >  1:490641/1‑235 (MQ=255)      cAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGAATAGAGGGGAAAATGTCAGCCCATTTGCGCAATGAATCAAAAATACCGCAGCAATGAGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGc                     >  2:388501/1‑251 (MQ=255)            gTATTGTTTTTTCTTACTAAGTTCGTGATATTGCGACATTTAAAAGCGGCTCAACTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGTAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCTCATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGACAGCGCACAACCAGCACGGAGCACTCTGCGTGAc                <  2:76689/250‑1 (MQ=255)            gTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGAc                <  1:505964/250‑1 (MQ=255)              aTTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCATTTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGCTATAAAAAACTGTGGCGTGTATGGTTCGGATTAGAGGGGAAAATTTCAGCACATTTGCGAAATGGATCAAAAAGCCCGCAGCAATGTGCCGGCGTTAGTGTCAGCGCACAACCCGCACGGGGCACTCTTCGTGACgac             >  1:178918/1‑249 (MQ=255)              aTTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCa             <  1:17073/251‑1 (MQ=255)                         ttACTACTTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCCTCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTTCAGATTTGAGGGGGAAATGTCAGCACATTTGCGAAATGAATCAAAAAACCCGCAGCAATGTGCGGGCGTTCGTGTCAGCGCCCAACAAGCACGGAGCACTCTGCGTGACGCCCTACAGCAgcg  >  2:223864/1‑251 (MQ=255)                          tACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGGCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTg    <  1:456585/248‑1 (MQ=255)                          |                                                                                                                                                                                                                                                          TTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCG  >  NC_000913/1434959‑1435233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑