New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2170171 =	NA (NA)	31 (0.920) +CAACACTTTAAAATGCCCTATATAGGGTTAACCAGTAATTATCTGTATGATAGCTTTGAGTTCGGGAGGA	22/346	0.5	NA	noncoding (1/1258 nt)	IS3	repeat region
	?	NC_000913	= 4519239	NA (NA)					noncoding (768/768 nt)	IS1	repeat region

GCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAAT  >  NC_000913/4518994‑4519478                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                gCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctc                                                                                                                                                                                                                                            >  1:59822‑M2/1‑246 (MQ=255)     ttGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctccc                                                                                                                                                                                                                                          >  1:256008‑M2/1‑242 (MQ=255)     ttGAGGTCGGGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctccc                                                                                                                                                                                                                                          >  2:162992‑M2/1‑242 (MQ=255)     gtgAGGTCGTGGTATAGATGACGGAGGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctccc                                                                                                                                                                                                                                          >  2:121035‑M2/2‑242 (MQ=255)      tGAGGTCGTGGAATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGAAGTCATTACCtcctaccaa                                                                                                                                                                                                                                        <  2:361134‑M2/250‑10 (MQ=255)               ggTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagc                                                                                                                                                                                                                               >  1:455265‑M2/1‑232 (MQ=255)                      aTGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatac                                                                                                                                                                                                                       <  1:137602‑M2/251‑27 (MQ=255)                        gACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacag                                                                                                                                                                                                                     >  2:139873‑M2/1‑223 (MQ=255)                             aTGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataat                                                                                                                                                                                                                >  1:357526‑M2/1‑218 (MQ=255)                                 ctggcCGCTGTCTGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGATACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGGCATCGGGCATTATCTGAACATAAAACACTATCAGTACGTTGGAGTCATTACCtcctcccgaactaaaagctatcatacagataattact                                                                                                                                                                                                            <  2:377231‑M2/251‑38 (MQ=255)                                          tgatgAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTTGGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTTGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaac                                                                                                                                                                                                     >  2:502883‑M2/3‑205 (MQ=255)                                              gAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagcgataaaacagataattactggttaaccctata                                                                                                                                                                                               >  1:182036‑M2/1‑201 (MQ=255)                                                aTCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAAt                                                                                                                                                                                             >  2:151690/1‑251 (MQ=255)                                                   aCGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatataggg                                                                                                                                                                                          >  1:434199‑M2/1‑196 (MQ=255)                                                    cGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggc                                                                                                                                                                                         >  1:203597‑M2/1‑195 (MQ=255)                                                                     gCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAAGCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgt                                                                                                                                                                          >  1:234282‑M2/1‑178 (MQ=255)                                                                                                 cgcATTGAGCGACATAATCTGAATCTGAGACAAGATCTGGCAAGGCTGGGACGGAAGTTACTGACGTTCTCAAAATCGGGGGAGTTGCATGACAAGGTCATCGGGCATGATCTGAACATAAAAAGCTATCAGTAAGATGGAGTCATTACAtcctcccgaactcaaagctatcatacagataattactggttaaccctatatcgggctttttaaagtgttgtgatcttaccccgcaatagtggacacgcggc                                                                                                                                            <  2:417245‑M2/251‑102 (MQ=255)                                                                                                 cgcATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCACGGCTGGGACGGAAGTTACTGTCGTTCTCAAACTCGGTGGAGTTCCATGACACGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTACGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggc                                                                                                                                            <  1:476813‑M2/251‑102 (MQ=255)                                                                                                      tGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATAGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagatacttactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctacgt                                                                                                                                       <  1:288042‑M2/251‑107 (MQ=255)                                                                                                         gCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtg                                                                                                                                      <  1:159568‑M2/249‑108 (MQ=255)                                                                                                            aCATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagta                                                                                                                                  <  1:44501‑M2/250‑112 (MQ=255)                                                                                                                 atctgaatctgaGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatcgtggacacgcggctaagtgagtaaactct                                                                                                                            <  1:147020‑M2/251‑118 (MQ=255)                                                                                                                        tctgaGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactg                                                                                                                                                                                                           >  1:225383‑M2/1‑127 (MQ=255)                                                                                                                        tctgaGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactg                                                                                                                                                                                                           <  2:225383‑M2/165‑39 (MQ=255)                                                                                                                        actgagacataggcgtgcgaggctgggacgtaagttactGGCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCAGTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataatgactggttaaccctatatagggcattttaaagtgttgtgaccttacccagcaatagtggaaacgcggctaagtgagtaaactctcagtcag                                                                                                                     >  2:376345‑M2/20‑127 (MQ=255)                                                                                                                                  caTCTGTCAAGGCTTGGTCGGCAGTTACTGTCGTTCTCAAAATCTGTGGAGTTGCATGACAAGGTCATCTGGTATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtcatcttacccagcaatagtggacacgcgtctaagtgtttaaactctcagtcagaggtgactca                                                                                                           >  1:143739‑M2/1‑117 (MQ=255)                                                                                                                                           aGGCTTGGACGGAAGTGACTGTCTTTCGCAAAAACGGTTGAGTTGCATTACAAGGTCATCGGGCATTATCTGAACAGAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatctttcccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacactacata                                                                                                  >  2:461965‑M2/1‑108 (MQ=255)                                                                                                                                           aGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGGTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaa                                                                                                  >  2:464282‑M2/1‑108 (MQ=255)                                                                                                                                                  gACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagttt                                                                                           >  1:390688‑M2/1‑101 (MQ=255)                                                                                                                                                            aCTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagta                                                                                  <  2:251700‑M2/250‑160 (MQ=255)                                                                                                                                                               gTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaataggggacacgcggctaagtgagtaaactctcaggcagaggtgactcacaagacaatacagtttcaaccagtaaaaa                                                                              >  2:472545‑M2/1‑88 (MQ=255)                                                                                                                                                                 cGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCATTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaattgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaa                                                                            >  1:430537‑M2/1‑86 (MQ=255)                                                                                                                                                                 aggtctcaaaAACGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactcacagtcagaggtgactcacaaaacaaaacagtttcaaccagtaaaaaa                                                                             >  2:44501‑M2/4‑86 (MQ=255)                                                                                                                                                                             cGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGATCATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattacttgttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacacca                                                                 >  2:217101‑M2/1‑74 (MQ=255)                                                                                                                                                                                 ggAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgc                                                            <  1:172021‑M2/251‑182 (MQ=255)                                                                                                                                                                                      tGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCgcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatga                                                        >  1:340989‑M2/1‑65 (MQ=255)                                                                                                                                                                                       gCATGACAAGGTCATCGGGCATTATCTGAACATAAAACGCTAACAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaccgtaaacaccattcgcatgaat                                                      >  2:45449‑M2/1‑64 (MQ=255)                                                                                                                                                                                        cATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaac                                                                                                >  2:475165‑M2/1‑63 (MQ=255)                                                                                                                                                                                        cATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaac                                                                                                <  1:475165‑M2/208‑146 (MQ=255)                                                                                                                                                                                         aTGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaattt                                                    <  1:32590‑M2/251‑190 (MQ=255)                                                                                                                                                                                           gACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcacagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcaaaagacaaaacagtttcaaccagtaaaaaaacgtaaccaccattcgcatgaatttcg                                                  <  1:486145‑M2/251‑192 (MQ=255)                                                                                                                                                                                           gACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttc                                                   >  2:137602‑M2/1‑60 (MQ=255)                                                                                                                                                                                                ggTCAGCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattctcatgaatttcgtagtt                                             >  1:106686‑M2/1‑55 (MQ=255)                                                                                                                                                                                                             tATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagct                                <  1:374088‑M2/251‑210 (MQ=255)                                                                                                                                                                                                                    aCATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTACCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTTTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCccacca                         <  1:151690/251‑1 (MQ=255)                                                                                                                                                                                                                      aTAAAACACTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagcttgcagaatg                       <  1:396073‑M2/251‑219 (MQ=255)                                                                                                                                                                                                                         aaaCACTAGCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagcttgcagaatgcat                    >  2:191702‑M2/1‑30 (MQ=255)                                                                                                                                                                                                                            cacTATCAGTAAGTTGGAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcagtttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagcttgcagaatgcatcgg                 >  1:416175‑M2/1‑27 (MQ=255)                                                                                                                                                                                                                                           ggAGTCATTACCtcctcccgaactcaaagctatcatacagataattactggttaaccctatatagggcattttaaagtgttgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaagacaaaacagtttcaaccagtaaaaaaacgtaaacaccattcgcatgaatttcgtagttaagatctgaagcttgcagaatgcatcggtgttactgccggagt  >  2:159568‑M2/1‑12 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                GCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAAT  >  NC_000913/4518994‑4519478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.