New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1979270NA (NA)57 (1.200) 52/486 0.1 91.9% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 4569764 5 (0.110)intergenic (‑1037/+398) ytiE/yjiR protein YtiE/fused putative DNA‑binding transcriptional regulator/putative aminotransferase YjiR

GCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCATGGCTCAAGAGCTAATCAGAGACGGATGACAAACGCAAAGCAGCCTGATGCGCTATGCTTATCAGGTCTACATAACCCATTAAATATATTGAACTTTAAAGATTTT  >  NC_000913/4569520‑4570009
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     
gCCCTGTTGGAGTTTATCCAAAAGCATATTCGCCAGCGCGATCTGATGGTGCTTAGCGATAAACTGTTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTTGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATTCCACAACACAGGTAGCTAATAAAGACGATTGCAGAGCGAATTCATAATGAGTGATAggtgat                                                                                                                                                                                                                                                 >  2:292939‑M2/1‑245 (MQ=255)
 cccTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGGTCCAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGGGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGCCGATTGCAGAGCGAATTCCTAATGTTGGATAggggatg                                                                                                                                                                                                                                                <  2:377893‑M2/251‑8 (MQ=255)
  ccTGTTGGAGGTGATACAAAAGCATATTCGCCAGCGAGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTTAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgc                                                                                                                                                                                                                                               >  2:207637‑M2/1‑243 (MQ=255)
           gTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgcccactt                                                                                                                                                                                                                                      <  1:240711‑M2/251‑18 (MQ=255)
             tGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGTCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCGGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGTGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaactta                                                                                                                                                                                                                                     >  2:312680‑M2/1‑232 (MQ=255)
              gATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttact                                                                                                                                                                                                                                   >  2:319336‑M2/1‑231 (MQ=255)
              gATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttac                                                                                                                                                                                                                                    >  1:150882‑M2/1‑231 (MQ=255)
                    aaaGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgattt                                                                                                                                                                                                                              <  2:228975‑M2/250‑26 (MQ=255)
                           atTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtat                                                                                                                                                                                                                       >  1:270202‑M2/1‑218 (MQ=255)
                           atTCGCCAGCGCGATCTGATGGGGCTTAGCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtat                                                                                                                                                                                                                       >  1:200760‑M2/1‑218 (MQ=255)
                              cGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGCAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGAttgttgtt                                                                                                                                                                                                                   <  2:68374/251‑1 (MQ=255)
                               gCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAGTGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGACTGCCCCAACACAGGGAGCGAATACTGACGATTGCAGAGCGACTTCATAATGCTGGCTAgatgttgctgccaacttactgatttagtgtatgatgg                                                                                                                                                                                                                  <  2:259384‑M2/251‑38 (MQ=255)
                                     gcgATCTGATGGGGGTTATAGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAACGTACATGTTACTTAGTGGTGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCTGTCGAATGCAACAACACAGGGAGAGAAGAATTACGATTGCAGAGAGAATTAATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                                                                                                                                            >  1:317‑M2/1‑208 (MQ=255)
                                       gATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTACTGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGCTTGCAGAGCGAATTCAGAATGATGGATAggggtagatgcacacttacggatttagagtatgatggtgtttttg                                                                                                                                                                                                          <  2:408083‑M2/251‑46 (MQ=255)
                                              tGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctg                                                                                                                                                                                                                                             >  2:483779‑M2/1‑199 (MQ=255)
                                              tGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctg                                                                                                                                                                                                                                             <  1:483779‑M2/209‑11 (MQ=255)
                                                gggCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCGAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc                                                                                                                                                                                                 >  2:171050‑M2/1‑197 (MQ=255)
                                                     tATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgg                                                                                                                                                                                            <  1:406861‑M2/251‑60 (MQ=255)
                                                                    agtaTTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGGCGAATGCCACAACACAGGGAGCGAATAATGACGACTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaactgactgatttagtgtatgatggtgttgttgaggtgctccagtggcttctgtttctagca                                                                                                                                                                             >  2:38375‑M2/1‑177 (MQ=255)
                                                                                    gagTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                                                                                                                             >  1:223174‑M2/1‑161 (MQ=255)
                                                                                     agTGTGCTAATGACAGCCAGATAACTGCGCTGTTACATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                                                                                                                             <  2:35997‑M2/250‑91 (MQ=255)
                                                                                          gcgaatgaCAGCTAGATAACTGCGCAGTTAAATTACATTTTACTGCCTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGGGAACTTTCCCGTCGAATGCCACAACACAGGGAGCGAATTATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatgttgtttttgaggtgctccagtggcatctgtttctatcagctgtccctcctgttcagcta                                                                                                                                                        >  2:146513‑M2/4‑155 (MQ=255)
                                                                                          gCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac                                                                                                                                                       <  1:406437‑M2/251‑97 (MQ=255)
                                                                                           cTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctttcagctgtccctcctgttcagctact                                                                                                                                                      <  2:118145‑M2/251‑98 (MQ=255)
                                                                                                          tAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgt                                                                                                                                       <  1:196284‑M2/251‑113 (MQ=255)
                                                                                                          tAACTGCGCTGTTAAATTACATTTTACTGAATGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACCGGGAGCGAATAATGACTATTGCAGAGCGAATTCATATTGATGGATAggtgctgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcacctactgacggggtggtgcgt                                                                                                                                       <  1:200735‑M2/251‑113 (MQ=255)
                                                                                                                cgcTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc                                                                                                                                 >  1:118145‑M2/1‑133 (MQ=255)
                                                                                                                       aaaTTACATTTTACTGGCTGGCGATGAAGCGCGTTTAAATGCGTTTATCAGTGGACTTACACGTCGAATGCCACAACACTGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGCTGGTTAggtgatgctgccaacttactgatttagtgtttgatggggtttttgagg                                                                                                                                                                                                       <  2:182530‑M2/174‑49 (MQ=255)
                                                                                                                       aaaTTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTCCCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttcctgatgtagtgtatgatggtgtttttgagg                                                                                                                                                                                                       >  1:182530‑M2/1‑126 (MQ=255)
                                                                                                                        aaTTACATTTTACTGACTGGCAATGAAGCACGTGTTAATTAGTTTATCAGTGAACGTACCCTGCTAATGCCACAACACATGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttacggatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggttggtgcgtaacggcaaaagcac                                                                                                                         >  2:209594‑M2/1‑125 (MQ=255)
                                                                                                                                 ttACTGAATGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtgcagctactgacggggtggtgcgtaacggcaaaagcaccgccggac                                                                                                                 >  2:156932‑M2/1‑116 (MQ=255)
                                                                                                                                        ctgGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaa                                                                                                                               <  1:369137‑M2/229‑121 (MQ=255)
                                                                                                                                        ctgGCGATGAAGCGCGTTTGAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAAGGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccaggggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaa                                                                                                                               >  2:369137‑M2/1‑109 (MQ=255)
                                                                                                                                                gAAGCGCGTTTTAACGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCATGGCTccaggg                                                                                                 >  2:32341/1‑246 (MQ=255)
                                                                                                                                                 aaGCGCGTTTTAATAAGTTTATCAGTGAACTTAACCGTCGAATGCCACAAAACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgc                                                                                                <  1:413902‑M2/251‑152 (MQ=255)
                                                                                                                                                    cgctgtttaatgaGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGTAGCGAATAATGACGATTGCAGAGCGAATTCAGAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggggcgccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctc                                                                                              >  1:96432‑M2/6‑97 (MQ=255)
                                                                                                                                                           tAATGAGTGTATAAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggagatgctgcccacttactgatttagggtatgttggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatacgcgctatctctgctctccctgcc                                                                                      <  2:262540‑M2/251‑162 (MQ=255)
                                                                                                                                                                aGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGAGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactggtttagtgtatgatggtgtttttgaggtgctccagtggcttctgtgtctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaacgcaccgccggacatcagcgctatctctgctctcactgccgtaa                                                                                  <  1:348829‑M2/250‑166 (MQ=255)
                                                                                                                                                                              cTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgc                                                                    <  1:239196‑M2/250‑180 (MQ=255)
                                                                                                                                                                                    cGTCGAATGCCCCAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgaggctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctaccagctgtccctcctgttcagctactgacggggtggggcgtaacggcaaaagcaccgccggccatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcac                                                             >  2:487103‑M2/1‑65 (MQ=255)
                                                                                                                                                                                       cGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcactt                                                           <  2:270613‑M2/250‑189 (MQ=255)
                                                                                                                                                                                       cGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgaagctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcactta                                                          >  1:439901‑M2/1‑62 (MQ=255)
                                                                                                                                                                                            gCCAAAACACCGGGAGCGAAAAATGACGATTGCAGAGCGAATTCAAAATGATGGATAggggatgctgccaatttactgttttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacacc                                                      >  2:461447‑M2/1‑57 (MQ=255)
                                                                                                                                                                                                  acacAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggttctccaggggcttctgttgctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctc                                               >  2:242648‑M2/1‑51 (MQ=255)
                                                                                                                                                                                                     caGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaac                                            <  1:506550‑M2/251‑204 (MQ=255)
                                                                                                                                                                                                        ggAGCGAATAAGGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctagcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccg                                         >  2:190936‑M2/1‑45 (MQ=255)
                                                                                                                                                                                                                    gACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccaga                             >  1:228975‑M2/1‑33 (MQ=255)
                                                                                                                                                                                                                        atggaagagcgaatTCATAATGATGGATAggtgatgcggccaacttactgatttagtgtatgatggtgtttttgaggggctccagaggcttctgtttctataagcagtccctcctgttcagctactgacggggtggtgcgtaacggccaaagcaccgccggacatcagcgctatctctgctctcaccgacgtaacacatggcaactgccgttcacttacaccgcttcttaacccgatacgcaccagaaaa                          <  2:230399‑M2/245‑222 (MQ=255)
                                                                                                                                                                                                                          tGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCATGGCTCAAGAGCTAATCAGAGACGGATGACAAACGCAAAGCAGCCTGATGCGCTATGCTTATCAGGTCTACCTAACCCATTAAat                       >  2:112363/1‑251 (MQ=255)
                                                                                                                                                                                                                           gCAGAGTGAATTCATAAGTAGGGATAggtgatgctgccaacttactgatttattgtatgatggtgtttttgatgtgctccagtggcttctgtttctatcagctgtccctccggttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctctctctgctctccctgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaacca                       >  2:358000‑M2/1‑26 (MQ=255)
                                                                                                                                                                                                                            cAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcatt                     >  1:239304‑M2/1‑25 (MQ=255)
                                                                                                                                                                                                                               agCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggaacgcaccagaaaatcattgat                  <  2:61676‑M2/251‑230 (MQ=255)
                                                                                                                                                                                                                                gagaaTTCATAATGATGGATAggtgatgctgccaacttactaatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctccttttcagctcctgccggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgata                 >  2:136734‑M2/3‑21 (MQ=255)
                                                                                                                                                                                                                                     ttCATAATGATGGAGAggggatgctgccaacttactgctttaatgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgccctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccgatacgcacccgaaattccttgatatggac            <  2:275959‑M2/251‑236 (MQ=255)
                                                                                                                                                                                                                                         tAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatg         <  1:487755‑M2/250‑239 (MQ=255)
                                                                                                                                                                                                                                         tAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCAt                                                                                                           >  1:193934/1‑152 (MQ=255)
                                                                                                                                                                                                                                         tAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCAt                                                                                                           <  2:193934/152‑1 (MQ=255)
                                                                                                                                                                                                                                               tgGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgccggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttccaccgcttctcaacccggtacgcaccagaaaataattgatatggccatgaatggcg  <  2:487944‑M2/251‑246 (MQ=255)
                                                                                                                                                                                                                                                 gATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttaca                                                        <  1:457014‑M2/195‑192 (MQ=255)
                                                                                                                                                                                                                                                 gATAggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttaca                                                        >  2:457014‑M2/1‑4 (MQ=255)
                                                                                                                                                                                                                                                  aTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg                                                                                                                                                                >  1:371709‑M2/1‑3 (MQ=255)
                                                                                                                                                                                                                                                  aTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg                                                                                                                                                                <  2:371709‑M2/90‑88 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     
GCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCATGGCTCAAGAGCTAATCAGAGACGGATGACAAACGCAAAGCAGCCTGATGCGCTATGCTTATCAGGTCTACATAACCCATTAAATATATTGAACTTTAAAGATTTT  >  NC_000913/4569520‑4570009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.