| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1919025 | 58 (1.220) | 3 (0.060) | 3/472 | 4.7 | 6.1% | coding (1516/2634 nt) | letB | lipophilic envelope spanning tunnel |
| ? | NC_000913 | = 2619886 | 36 (0.780) | coding (275/1290 nt) | uraA | uracil:H(+) symporter UraA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTGACCGCCAGGGTGGTAATAGAGATGATGATGGTTTTGGAGTCTGGCGTTTGCCCTTCAGCCGGGAGTAAACCC‑GCCATACCGGCAGCTACGCCCGCCAGCTCCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTC > NC_000913/2619655‑2620129 | gTGACCGCCAGGGTGGAAATAGAGATGATGATGGTTTTGGCGTCTGGCGTTTGCCCTTCAGCCGGGAGTAAACCC‑GCCATACCGGCAGCTACGCCAGCCAGCTCCCGACCGATGCCGGCAACGATTGCGCCCATTTCCGACGGAGGAAACAGCACATC‑ACGCCAACCGGTCCCCGCTTTCTTCACGATAAAAGAACCCAGGCCGAACAGCACGCCGCCCATAATAAATCACACCC‑GCGCGACTTAATAccc > 2:243874/1‑251 (MQ=255) gACCGCCAGGGTGGTAATAGAGATGATGATGGTTTTGGAGTCTGGCGTTTGCCCTTCAGCCGGGAGTAAACCC‑GCCATACCGGCAGCTACGCCCGCCAGCTCCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACCGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGAACGCCGCACATAATAAAGC‑CGCCAAGCGCGACTTCATCCCCt > 2:187858/1‑250 (MQ=255) ggtAATAGAGATGATGATGGTTTTGGAGTCTGGCGTTTGCCCTTCAGCCGGGAGTAAACCC‑GCCATACCGGCAGCTACGCCCGCCAGCTCCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGt > 2:89440/1‑250 (MQ=255) gatgatgatGGTTTTGGAGTCTGGCGTTTGCCCTTCAGCCGGGAGTAAACCC‑GCCATACCGGCAGCTACGCCCGCCAGCTCCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCg > 1:196426/1‑251 (MQ=255) gttttggtgttttggggtgggccGTTTCCCCCTCAGGCGGGAGAAAACCCCGCCATCCCGGCAGCTCCGCCCGCCAGCTCCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCgg < 1:89440/229‑1 (MQ=255) gatgatgGTTTTGGAGTCTGGCGTTTGCCCTTCAGCCGGGAGTAAACCC‑GCCATACCGGCAGCTACGCCCGCCAGCTCCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCgg > 1:85205/1‑249 (MQ=255) ggAGTCTGGCGTTTGCCCTTCAGCCGGGAGTAAACCC‑GCCATACCGGCAGCTACGCCCGCCAGCTCCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCa > 1:286392/1‑250 (MQ=255) ttGCCCTTCAGCCGGGAGTAAACCC‑GCCATACCGGCAGATACGCCCTCCCGCTCCTGACCGTTGACGGCCACGATTGCGCCCCTTGCCGCCGGTGGCAACAGCACGTC‑CCCCCAGACGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCACACATAATAAAGC‑CGCCCAGCGCGAAGTCATACCCCAACGGCAACAGAAACAATACCCGAGAAATaacgcacaagatggaacc > 2:11306/1‑233 (MQ=255) gggAGTAAACCC‑GCCATACCGGCAGCTACGCCCGCCAGCTCCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAAt > 1:221368/1‑251 (MQ=255) aaCCC‑GCCATACCGGCAGCTACGCCCGCCAGCTCCCGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCACAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCCAGATAAGCCGGGCTTTTCCCt > 2:452822/1‑251 (MQ=255) cgacaacacccgcacccacgtccgccAGTACCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGAC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGACGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGTAACCAAGATAAGCCGGAATGTTCCCTTTa < 2:109305/230‑1 (MQ=255) ccATACCGGCAGCTACGCCCGCCAGCTCCAGACCGCTGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAACAGAAACCAGGCAGAACAGCACGCCGCACATACTAAAAC‑CACCCAGCGCGACTTCATACCCTAACGGCAACAGAAAAAAAACCGGAGAACTAAAGGCACAACTGGAACCAAGATAAGCCGGAATTTTCCATTTACa > 2:399698/1‑250 (MQ=255) gcggctccgcccgccAGCACCAGACCGATTACGGCAACGATTGCGCCCATTGCGGCAGGTGGAAACAGCACCTC‑AAGCCAGCCGGGCCCCGCTTTCTTCACGAAAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCTGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTGCCCTTTACTGATGAagag < 2:325894/244‑1 (MQ=255) ccaccaccccgacagatacAGACCTATGTCTGCAACGATTGCGCCCATTGCCGCAGGGGGAAACTGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCCTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGAt < 2:274270/233‑1 (MQ=255) cccgccAGCTCCAGACCGATGACGGCACCGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATAcagcag < 2:292040/251‑1 (MQ=255) cAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATAc < 1:194429/251‑1 (MQ=255) cGATGACGGCAACGTTTGCGCCCATTGCCGCAGGTGGAAACAGCACGCT‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTa < 2:395212/251‑1 (MQ=255) cGATGACGGCAAAGAGTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCCGCCGGTCCCCGCTTTATTCACGATAAAAGAAACCAGGCAGAACAGAACGCCGCACATAATAAAGC‑CGCCCAGCGCGAATGCATACCCTAACGACAACAGTAACAATAACGGTGAAATAAAGGAAAAGCTGGCACCAAGATAAGACGGCGTTTTCCATTTACAGATGAGGAACTACAGCAGAGTCCCAATAccatt > 2:230203/1‑247 (MQ=255) gcagggaacgagtgcccacagtGCCGCAGGTGGAAACGACACGTC‑CAGCCCGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACAGAAAAAAGC‑CGCCCAACGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATGTTCCATTGACATAGGAAGAGATACTGCAGCGTTCCAATCCCGTTAAATa < 2:31940/230‑1 (MQ=255) ccATTGCCGCAGGTGGAAACAGCACGCC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCggg < 2:286392/251‑1 (MQ=255) ccATGGCCGCAGGGGGAAACAGCACGTC‑CAGCCAGTCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAGCAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGAAAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGCCGCCggg < 2:432564/251‑1 (MQ=255) gtcagCAGGTGGAAACACCAC‑TCTCCGCCAGCCGGGCCCCTCTTTCTACACGACAAAAGAAACCAGGCAGTACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTGCATATCCGAACTGCAACAGCAACAATACCGGTGAAATAAAGGCAAAGCTGGACCCAAGATAAGCCGGAATTTTTACTTTACAGAGGATGAGATACAGCAGCGTTTCAATTCCGTTAAAGAACAGTACAGTCGCCGGGTTaa < 2:298074/247‑1 (MQ=255) gAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATa > 1:263752/1‑249 (MQ=255) gCACGTC‑CAGCCATCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGc < 2:196426/251‑1 (MQ=255) cACGGC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGAGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTGAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCa < 2:103052/251‑1 (MQ=255) agccGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCAAATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGtt > 1:24164/1‑251 (MQ=255) ccGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAAc < 1:269696/251‑1 (MQ=255) gATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAACATGGCGAACAAAt > 1:301384/1‑251 (MQ=255) gCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTc > 1:175311/1‑251 (MQ=255) cACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCt < 1:114470/251‑1 (MQ=255) cgccgcACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGt < 2:273157/251‑1 (MQ=255) gccgcACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCtt > 1:107198/1‑110 (MQ=255) gccgcACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTGTCCCtt < 2:107198/110‑1 (MQ=255) ccgcACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTaa < 1:498335/251‑1 (MQ=255) ataaAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGATGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCgg > 2:330035/1‑251 (MQ=255) aaaGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGGGGCgggt > 2:73731/1‑249 (MQ=255) | GTGACCGCCAGGGTGGTAATAGAGATGATGATGGTTTTGGAGTCTGGCGTTTGCCCTTCAGCCGGGAGTAAACCC‑GCCATACCGGCAGCTACGCCCGCCAGCTCCAGACCGATGACGGCAACGATTGCGCCCATTGCCGCAGGTGGAAACAGCACGTC‑CAGCCAGCCGGTCCCCGCTTTCTTCACGATAAAAGAAACCAGGCAGAACAGCACGCCGCACATAATAAAGC‑CGCCCAGCGCGACTTCATACCCTAACGGCAACAGTAACAATACCGGTGAAATAAAGGCAAAGCTGGAACCAAGATAAGCCGGAATTTTCCCTTTACAGATGAAGAGATACAGCAGCGTTCCAATACCGTTAAATAACAGTACAGTCGCCGGGTTAATATGAAATAAGACGGGCACCAGGACGGTTGCACCAAACATGGCGAACAAATGTTGCAAACTAAGCGGGATTGTCTGTAAAAGTGGCGGTC > NC_000913/2619655‑2620129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |