| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 39 [0] | [1] 40 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 39 (0.850) | 35/470 | 0.3 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | ethanolamine ammonia‑lyase reactivase EutA | |||||
CGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTGAC > NC_000913/2558466‑2558940 | cGCAGTCATCTTCATAGGCAATCACCTGCTTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTACGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGCTATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgacatgcggatgatttcc > 2:16254‑M1/1‑233 (MQ=255) cccgGATTAGTGCGTCTGCCCCCTACGGTCATTCCCAACCACTCCTGCTTTGCCGCCCCGCGCCCCTGTGAGCTTGCCGCTGCGCCCTCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccg < 1:429705‑M1/250‑42 (MQ=255) tgccccctctggccattcccgacacccCCTGCTTTGCCGCCAGGCGCGCCTGTGGGCTGCCCGCGGGTACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgta < 1:84891‑M1/237‑57 (MQ=255) cATTTCCGCCAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTCCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATACGTCGCTCCCTCAGGAAGgaaatgcgggtgatttcaccgtcaccggcacaaccactccgccaaaaagaggcgcaccaatgtcgacat > 2:423042‑M1/1‑181 (MQ=255) cacaccccttgctttgccgCCAGGCTCTCTTTGGAGTTTCCCGTTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtccccc < 1:269915‑M1/242‑78 (MQ=255) gccgccACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGCAGgaaatgcgagtgatttcaccgtcaccggcacaaccgctccgccaaaaagaggcgtaccaaggtcgatatagtcccccccgcggccaatcact > 2:280794‑M1/1‑159 (MQ=255) aCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtc > 1:191740‑M1/1‑153 (MQ=255) tctgttcgtgcgccgcggcgaccCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTGTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTCTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcttaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgcct < 2:485743‑M1/239‑105 (MQ=255) ggtgacgtggccgcggcacgccccgccagctcaaccccctaacgcagtTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATTCATTGCCGAACAAGGGGGTCTTTAGTGTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgagccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgcc < 2:196348‑M1/230‑108 (MQ=255) gAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaac > 1:285358‑M1/1‑141 (MQ=255) gcccgccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctg > 1:344564‑M1/1‑124 (MQ=255) ccgccAGCACATCCCCCGAACTCAGGTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTTGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttccccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacggtagttgttgtagctgtg < 2:363221‑M1/251‑130 (MQ=255) cccccGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgg < 1:150335‑M1/222‑113 (MQ=255) cccccGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgg > 2:150335‑M1/1‑110 (MQ=255) ccccGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacat < 1:99745‑M1/251‑143 (MQ=255) cccGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgctatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggatgtgttgtagctgtgggcgcaccaccatg > 2:335834‑M1/1‑108 (MQ=255) ccgcacttctttctctttagccaccacccCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGtaaatgcaattgatttcaccgtcacctgcacaaccgatccgccaaaaacaggcgtaccaatgtcgatatagtcccccgcgctgccaatcacctgtcaatgactgccaacgcgagttgttgtatctgtgggcccaacaacatgcccaca < 2:221318‑M1/237‑149 (MQ=255) aCGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaacaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgaaaacgggagctgttgtagctgtgggcgcaaaaacatgcca > 1:312077‑M1/1‑103 (MQ=255) gCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccag > 1:85631‑M1/1‑101 (MQ=255) ttCGTTGGCTTTAGCCAGCACCTATTTTACATCCTTCAACTGATATACATTGCCGAACAATGAGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacactcacttcgtcaatacatgccaacgggagttgatttagctgtgggcgcaccaacatgcccagagcttt > 2:297022‑M1/1‑97 (MQ=255) gTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttacc > 1:391069‑M1/1‑94 (MQ=255) aGCCAGCTCCGCCTTTACATCCTTAAGCAGATATACATTGCCGAACAATGGTGTCTTGAGTTTCATAAGTCGTCCCCTCAGGAAGgaaatgcgagtgatttctccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgttgatatagtcccccgcgcggataagcacttcgtcaacgactgccatcgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcct < 2:229285‑M1/250‑166 (MQ=255) gCACCTCTTTTACATCCTTAAAATGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtacccatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctatgggcgaaacaacatgccccgcgctttaccaaagtcctgcccgg > 2:133218‑M1/1‑80 (MQ=255) ctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgctcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccgaccaccc > 1:195176‑M1/1‑74 (MQ=255) tttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccccc > 2:462398‑M1/1‑72 (MQ=255) tAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggat > 1:249348‑M1/1‑62 (MQ=255) aaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgaccggccaccaccagcaggggatgc > 2:150758‑M1/1‑60 (MQ=255) cccctcgtccgatctaatggggtctttagtttCATAAGTCGTTCCCCCAGGAAGgaaatgcgagtgattgcaccgtcaccggcccaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattc < 2:184274‑M1/236‑198 (MQ=255) ataCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacacccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttac > 1:480011‑M1/1‑53 (MQ=255) ataCATTGCCGAAAAATGTGGTATTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacacccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttac < 2:480011‑M1/209‑157 (MQ=255) aaTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattc > 1:184274‑M1/1‑39 (MQ=255) ggTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtca < 2:408395‑M1/132‑99 (MQ=255) ggTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtca > 1:408395‑M1/1‑34 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgctttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgacca > 2:285691‑M1/1‑28 (MQ=255) aGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaac < 2:285358‑M1/251‑225 (MQ=255) aGTTTCATAAGTCGTTCCCGCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaa < 2:5794‑M1/250‑224 (MQ=255) gTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgacatcgaccaacg > 2:91250‑M1/1‑26 (MQ=255) cTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttgatgaccgtcagt > 1:73937‑M1/1‑9 (MQ=255) cTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttgatgaccgtcagt > 1:500591‑M1/1‑9 (MQ=255) | CGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTGAC > NC_000913/2558466‑2558940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |