Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,626,838 2 bp→GT coding (927‑928/1383 nt) radA → DNA recombination protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,626,8380AG93.0% 110.1 / ‑1.6 43P309P (CCA→CCGradADNA recombination protein
Reads supporting (aligned to +/- strand):  ref base A (1/2);  new base G (19/21);  total (20/23)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01
*NC_0009134,626,8390CT92.9% 104.9 / 1.0 43L310L (CTG→TTG) radADNA recombination protein
Reads supporting (aligned to +/- strand):  ref base C (1/2);  new base T (18/21);  total (20/23)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.05e-01

CCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTGTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGTGCCGACTTAGCGTTACTGCTGGCGATGGTTTCCAGCCTGCGCGACAGACCGCTG  >  NC_000913/4626598‑4627081
                                                                                                                                                                                                                                                  ||                                                                                                                                                                                                                                                   
cccgaagggccTGGACCACTGTAGCGCCTGTTCGGTGCTTTGGGATGGCGTTGCCGGCTCCCTTTTTTGGACGTGGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCtggtgg                                                                                                                                                                                                                                            <  2:115983/241‑1 (MQ=255)
            ggAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGgcgc                                                                                                                                                                                                                                >  1:227917/1‑251 (MQ=255)
                 acTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCGGCCATAAAAACCGATTCGGCTCGGTGAATGCGATGGGCGTCTTCGCGATGACCGCACAGAGGCTGCGTGACGTCATCAACCCTTCGGCCATTTTCTTCCGTCTCGGCGATGAAGTGACATCCGGCAGCTCCATAATGGTGGTGTGGGAAGGAACGCACACGTTGCTGGTGGAGATTCAGGCGCAGGTc                                                                                                                                                                                                                           >  2:301528/1‑251 (MQ=255)
                       tCGACTGTTCGGTGCTTTTGGCTGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGTGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCTATTTTCTTAAGTCGCGGCGATGCATTGACCTCCGGCAGCTACGTGATGGTGGAGTGGGAAGGAACGCAGCCGGTGCTGGGGGAGATTCAGgcgggggccgagcat                                                                                                                                                                                                                     >  2:17380/1‑239 (MQ=255)
                        cGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCAc                                                                                                                                                                                                                     <  1:212567/250‑1 (MQ=255)
                           cTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAACAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGGTGAAGTGACCTCCGGCAGACACGTGATGGTGGTGTGGGAAGGGACGCGACCGTTGCTGGGGGAGATGCAGGAGCTGGTAGATAACTCgg                                                                                                                                                                                                                 >  2:314535/1‑250 (MQ=255)
                                cGGTGCTTTTGGATGGCGGTGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCGTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCgatgat                                                                                                                                                                                                             <  2:198132/250‑1 (MQ=255)
                                 ggTGCTTTTGGATGTGGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCTCTTCTGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAGCAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGGCCTCTGGCAGTTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGTTGGTCGATCACTCGatgatgt                                                                                                                                                                                                           <  1:33599/251‑2 (MQ=255)
                                 ggTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATgg                                                                                                                                                                                                           >  1:3608/1‑251 (MQ=255)
                                              ggCGGTGCCGACTCCCGTTTGCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTGTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGcgccg                                                                                                                                                                                              <  2:179219/251‑1 (MQ=255)
                                              ggCGATGCCGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGcgccg                                                                                                                                                                                              >  1:300843/1‑251 (MQ=255)
                                                      cGACTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGc                                                                                                                                                                                        >  1:218609/1‑249 (MQ=255)
                                                         cTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGACTGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGCAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGCATCCGCGCCGCGTGGCAGTgg                                                                                                                                                                                   >  1:169965/1‑251 (MQ=255)
                                                         cTCCCGTTTTCGCACTTTACGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGATGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTACGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGAGCCGCGTGGCAgggg                                                                                                                                                                                   >  1:37820/1‑248 (MQ=255)
                                                                    ggacgttacgcgtccatgaatgacGCTTCGGCGCGGTGAATTAGCCGGGCGTCCGCGCGATGTCCGTGCAGGGGCTGCGGGAAGTCATCAACTCATCGGCATTTTTCTTCTGTCGCGGAGATGAAGTGACCTCCGGCTGGTCGTGGATGTTGGTGTTGGAAGGGGCGCGTCCGTTGCTGGGTGAGATTCAGGCGCTGGTCGATCACTCGATTATTGCGAATCCGCTCCGCGTGGCAGTGGGGCTGGAACaa                                                                                                                                                                        <  1:22350/228‑1 (MQ=255)
                                                                          taccctgccagaaaacgcGCTTCGGCGCGGTGAATGAGCTGTGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTGCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACGCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCg                                                                                                                                                                   <  2:218609/233‑1 (MQ=255)
                                                                               aGCCATAAAAACCGCTTCGGCGCGGTGAATGCGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGGGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGAAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGc                                                                                                                                                             <  2:47472/251‑1 (MQ=255)
                                                                                   aTAAAAACCGCTTCGGCGAGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCTTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGCCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATc                                                                                                                                                         <  1:224787/251‑1 (MQ=255)
                                                                                    tAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGGCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGAGGGCGACTCCGCGCCGCGTGGCGGTGGGGCTGGAACAAAACCGTCTGGCAATcc                                                                                                                                                        >  2:326363/1‑251 (MQ=255)
                                                                                               tCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCAGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCtgt                                                                                                                                              <  1:202647/250‑1 (MQ=255)
                                                                                                   cgcgGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTTGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGAGTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGAAATCCTGCTGGCTGTCTTGc                                                                                                                                         <  2:263840/251‑1 (MQ=255)
                                                                                                      ggTGAATGAGCTGGGCGTCTTCTCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTGCTGAAGTCGCGGAGATGAAGTGACCTCCGGCTGTTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGTTGGCTGTCTTGCAcc                                                                                                                                      <  2:275427/251‑1 (MQ=255)
                                                                                                          aaTGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCa                                                                                                                                  <  1:287635/251‑1 (MQ=255)
                                                                                                           aTGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCAc                                                                                                                                 >  1:168623/1‑251 (MQ=255)
                                                                                                                 tGGGCGTCTTCGCGATAACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGACGCGGAGATGAAGAGACCTCCGGCAGCTCCGTGATGGAGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGGGATTAAGGCGCTGGGCGATCACTCGATGATGGCGAATCCGAGCCGCGTGGCAGTGGGGCTGGACCAAAACCGTCTGGACATCCTGATGGCTGTCTTGACCCGTCACggtgt                                                                                                                            >  2:334276/1‑249 (MQ=255)
                                                                                                                      gTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGGCGCGGAGATGAAGTGACCTCCGGCAGTTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCa                                                                                                                      <  1:260807/251‑1 (MQ=255)
                                                                                                                                  aCCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCGCTGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGTCAATCCTGCTGGCTGTCTTGCTCCGTCACGGTGGTCTGCAAATGGCCGTTCa                                                                                                          <  1:136213/251‑1 (MQ=255)
                                                                                                                                       aCAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGAtg                                                                                                     >  1:77316/1‑251 (MQ=255)
                                                                                                                                            ggCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGttt                                                                                                <  1:201249/251‑1 (MQ=255)
                                                                                                                                                gCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTtgtg                                                                                             <  1:326363/250‑1 (MQ=255)
                                                                                                                                                                      gCAATTTTCTTAAGTCGCGGAGATGAAGTGCCCTCCGGCATCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTTCTGGTGGAGATTCAGGCTCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGTGGCTGGACCAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGt                                                                      <  1:14319/251‑1 (MQ=255)
                                                                                                                                                                          ttttCTTAAGTCGCGGAGATGAAGTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGGATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGAAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAAcc                                                                  >  1:163267/1‑251 (MQ=255)
                                                                                                                                                                                  aGTCGCGGAGATGAAGTGACCGCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCgat                                                                                                                                                                                                                <  1:5687/101‑1 (MQ=255)
                                                                                                                                                                                  aGTCGCAGAGATGAGGAGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCgat                                                                                                                                                                                                                >  2:5687/1‑101 (MQ=255)
                                                                                                                                                                                        ggcgATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTgggg                                                                                                                                                                                 <  2:16246/126‑1 (MQ=255)
                                                                                                                                                                                        ggcgATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTgggg                                                                                                                                                                                 >  1:16246/1‑126 (MQ=255)
                                                                                                                                                                                              gAAGTGACCTACGGCAGCTCCGTGATGGTTGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAAGCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCGGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGc                                             <  2:168623/251‑1 (MQ=255)
                                                                                                                                                                                                 gTGACCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGCGtt                                          >  1:129337/1‑251 (MQ=255)
                                                                                                                                                                                                    aCCTCCGGCAGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGCGTTAct                                       >  1:24155/1‑251 (MQ=255)
                                                                                                                                                                                                         cggcaGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGGCTTGCAACGTCCCGGAGGGCTGCAAATGGCCGATCAGGAGGTGTTTGGTAAAGTGGTCGGCGGCGTGTAGGTAACCACAACACAAGCCGGCTTAGCGATACTGCTgg                                  >  2:10125/5‑251 (MQ=255)
                                                                                                                                                                                                            caGCTCCGTGATGGTGGTGTGGGAAGGAACGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGACGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGCGTTACTGCTGGCgg                               >  1:232332/2‑250 (MQ=255)
                                                                                                                                                                                                                                       ggaaCGCGTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGCGTTACTGCTGGCGATGGTTTCCAGCCTGCGTGACAGAcc      <  1:128710/251‑1 (MQ=255)
                                                                                                                                                                                                                                           cgcgTCCGTTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAATCCGCGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTCTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGCGCCGACTTAGCGTTACTGCTGGCGATGGTTTCCAGCCTGCGTGACAGACCGCTg  <  1:258667/251‑1 (MQ=255)
                                                                                                                                                                                                                                                  ||                                                                                                                                                                                                                                                   
CCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTGTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGTGCCGACTTAGCGTTACTGCTGGCGATGGTTTCCAGCCTGCGCGACAGACCGCTG  >  NC_000913/4626598‑4627081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: