Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,555,047 2 bp→TG coding (1963‑1964/2706 nt) malT → DNA‑binding transcriptional activator MalT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,555,0470GT97.8% 122.7 / ‑5.8 45V655C (GTC→TGC) malTDNA‑binding transcriptional activator MalT
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base T (23/21);  total (23/22)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.04e-01
*NC_0009133,555,0480TG97.8% 142.2 / NA 45V655C (GTC→TGC) malTDNA‑binding transcriptional activator MalT
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base G (23/21);  total (23/22)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

CGCAGCTGTTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTT  >  NC_000913/3554814‑3555279
                                                                                                                                                                                                                                         ||                                                                                                                                                                                                                                        
cgcAGCTGGTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTgg                                                                                                                                                                                                                          <  2:145917/251‑1 (MQ=255)
                cTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAGATGACCGGCGAt                                                                                                                                                                                                          >  2:384038/1‑250 (MQ=255)
                  gggCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCGTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTTGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCTAATGACCGGCGATaaa                                                                                                                                                                                                       <  1:53090/251‑1 (MQ=255)
                                gAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCAACGCCACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGGGATTTAGATAACGCCAGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGCCTGGATCTCTAACGCCAACACATGCCGGGTGATTTACTGGCAAATGACAGGGGACACATCCGCCGCTGCCa                                                                                                                                                                                          >  2:122088/1‑250 (MQ=255)
                                                    tAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAAACTGCTGGGGAAGGGCAAATATCCCAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGCTAAAGCCGCCGCTGCCAACGGATTGCGTCATAAGGCt                                                                                                                                                                      >  2:69902/1‑250 (MQ=255)
                                                        gggATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAAcc                                                                                                                                                                 <  1:152773/251‑1 (MQ=255)
                                                              gAAGTCTTGTCGTCTTATCAGCCCCAGAAGCAGCTTCAGTGCCTGGCAATGGTCATTCTATGCTCGCTGGCCCGGGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCCGGGGAATGGCAAATATCACAGCGACTGTATCTCTAACGACAACAAAGTCCGGGTGATTTACTTGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGtt                                                                                                                                                           <  1:198650/251‑1 (MQ=255)
                                                                   ctggtagtcttcgcAGCCAGAGGAACAGCTTCAGTGCCGGGCAATGTTGATTCAATGCTCGCTGGCCCGGGGTGATTTAGATAACGCCCGTAACCCTCTTAACCGCCTGGAAACCCTGCTGGGGAAGGGAAAATAACCCAACGGCGGGATCACAAACGCCAACAAATGCCGGGGAATATCCTGACAATGACCCGGCGCTAAATCAGCAGCTGCCAACTGGTTGGCACATACGGATAAACCagaaattgcg                                                                                                                                                       >  2:296168/14‑243 (MQ=255)
                                                                       tcgtcTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGaaca                                                                                                                                                   >  1:67463/1‑250 (MQ=255)
                                                                        cgtcTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGaacaac                                                                                                                                                 <  1:287021/251‑1 (MQ=255)
                                                                               tCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAAACAGAGTTTGCGAACAACCACTTcc                                                                                                                                          >  1:278622/1‑251 (MQ=255)
                                                                                cAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGCGTTTGCGAACAACCACTTCCt                                                                                                                                         >  1:219985/1‑251 (MQ=255)
                                                                                           aCAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGCACAACCACTTCCTGCAAGGTCAAt                                                                                                                              >  1:332845/1‑251 (MQ=255)
                                                                                                 tCAGTTCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGgcgc                                                                                                                         <  1:256902/250‑1 (MQ=255)
                                                                                                  cAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCa                                                                                                                        <  1:289233/250‑1 (MQ=255)
                                                                                                          ggCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGccc                                                                                                               <  1:5961/251‑1 (MQ=255)
                                                                                                          ggCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGccc                                                                                                               <  1:122088/251‑1 (MQ=255)
                                                                                                                   gATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACaa                                                                                                       >  1:267015/1‑250 (MQ=255)
                                                                                                                      tCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCGACATTGCCCGTGCACAAATc                                                                                                    <  1:197261/250‑1 (MQ=255)
                                                                                                                      tCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCt                                                                                                   >  1:66537/1‑251 (MQ=255)
                                                                                                                         acgCTCGCGGGCCCGTTGTGATTTAGATAACGCCCGTAGCCAGCTGACCCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCACCAAATGCCGGGTGATTTACGGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGc                                                                                                                                                        <  2:88864/193‑1 (MQ=255)
                                                                                                                         aTGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGc                                                                                                                                                        >  1:88864/1‑195 (MQ=255)
                                                                                                                           gCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTTCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCt                                                                                               <  1:183940/250‑1 (MQ=255)
                                                                                                                              cGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTggg                                                                                            <  1:61265/250‑1 (MQ=255)
                                                                                                                                   gctcgtgggaaTTTAGCTAACGCCCTTAGCCCGCGGAACCGTCTGGAAAACCGTCGGGGGAATGGCAAATATCACTGCGACGGGATCTCTATCGCCAACAAATGCCGGGTGATTTACTGTCAAAGGACCGGCGATAAATCCTCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGTTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGtt                                                                                      <  2:378260/241‑1 (MQ=255)
                                                                                                                                   gCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCCACTGGTTGCGTCATACGGCTAAACCAGAGATTGCGAACAAACACTTCCTGCCAGTACAATGGCCCAACATTGCCCGCGCACAAAACATGCTGGGCGCGtt                                                                                      >  2:183722/1‑251 (MQ=255)
                                                                                                                                        tggtgATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCGGCTGGGGAATGGCAAATATCACCGCGACTGGATCTCTAACGCCAACCAATGACGGGTGATTTACTGGCAACTGACCGGAGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCCGCGTTTGAGCACAACCACTTCCTGCAAGGTACATGGCGCAACATTGCCCGTGCGCACATCTGGATGGGCGAGTTTGAAc                                                                                 >  2:160055/1‑251 (MQ=255)
                                                                                                                                         ggtgATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAAcc                                                                                >  1:4910/1‑251 (MQ=255)
                                                                                                                                                tAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCGCTAACGCCAACAAATGCCGGGTGATTTACGGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGa                                                                          <  1:281972/250‑1 (MQ=255)
                                                                                                                                                 aGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGaa                                                                         <  1:206356/250‑1 (MQ=255)
                                                                                                                                                              aGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGtt                                                                                                                                                                                   <  1:285493/131‑1 (MQ=255)
                                                                                                                                                               gCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCgaagaa                                                          <  1:128044/251‑1 (MQ=255)
                                                                                                                                                                      aaaCCGTCTGGAAAACCTGCAGGGGAATGGCAAATATCACAGCGACTGGATCTCAAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCACCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCACTGGCGCAACATTGCCCGTGAACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGATCTCGAAGAACTCAATg                                                   >  2:270643/2‑251 (MQ=255)
                                                                                                                                                                       aaCCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGa                                                  <  1:384038/251‑1 (MQ=255)
                                                                                                                                                                            tcaggAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGGTCTCTAACCCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACATCCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGaa                                                 <  1:156794/244‑1 (MQ=255)
                                                                                                                                                                                  acaCCTGCTGGGGAATGGCAAATATCCCAGCGACTGGAGCTCTAACGCCAATAACTGCAGGGAGATTTACTGGCAAATGACCGGCGTTAAAGCCGCCGTTGCCAACTGGTTGCGGCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGGCAATGGAGCAACATGTCCCGTGCACAACTCTTGCTCAGCGCGTTTAACCCGGGAGCAATTGTTCTCgaagcacgtaaaggaagtacccggg                                       >  2:352480/3‑230 (MQ=255)
                                                                                                                                                                                      ctgctgGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCt                                   >  1:301748/1‑251 (MQ=255)
                                                                                                                                                                                        gttgGGGAATGGCAAATATCCCAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTGCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGc                                 <  2:359288/249‑1 (MQ=255)
                                                                                                                                                                                          tgGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAGCAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCTAAGAACTCAATGAAACAGCCCGGACTCTGCgg                               >  2:149740/1‑251 (MQ=255)
                                                                                                                                                                                          tgGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAACTTGTTCTCGACGAACTCAATGAAAATGCCCGGAGTCTGCgg                               >  1:252250/1‑251 (MQ=255)
                                                                                                                                                                                              gAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTtg                            >  1:157363/1‑250 (MQ=255)
                                                                                                                                                                                                  ggCAAATATCACAGCGACTGGATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTtgatg                         >  1:8551/1‑249 (MQ=255)
                                                                                                                                                                                                                  aCTGGATCGCTAACGCCAACAAATGCCGTGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAAc       <  1:114625/251‑1 (MQ=255)
                                                                                                                                                                                                                     ggATCTCTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTg    >  1:302260/1‑251 (MQ=255)
                                                                                                                                                                                                                       ctctcTAACGCCAACAAATGCCGGGTGATTTACTGGCAAATGACCGGCGATCAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGATTGAACCGGCAGCAATTGTTCTCGAAGAACACAATGAAAATGCCCGGCGCCTACGGTGGATGAGCGATCACAACAGTAACCTGtt  >  2:120820/2‑251 (MQ=255)
                                                                                                                                                                                                                                         ||                                                                                                                                                                                                                                        
CGCAGCTGTTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTT  >  NC_000913/3554814‑3555279

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: