| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 23,896 | 2 bp→TA | coding (1506‑1507/2817 nt) | ileS → | isoleucine‑‑tRNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 23,896 | 0 | C | T | 91.1% | 144.3 / 3.4 | 57 | V502V (GTC→GTT) | ileS | isoleucine‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base C (2/3); new base T (21/30); total (23/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
| * | NC_000913 | 23,897 | 0 | G | A | 91.1% | 142.0 / 3.4 | 57 | D503N (GAT→AAC) | ileS | isoleucine‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base G (2/3); new base A (20/31); total (23/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01 | |||||||||||
CAGCATGGATCAGAAAGGTCTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGTGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTTGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTCGATGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGATCA‑GTACGTGAA‑AGTGCCGGACACAT‑TGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAACACCGCGGCTGGTTCATGTCTTCCCTAATGATCTCCACCGCGATGAAGGGTA > NC_000913/23659‑24137 || cAGCATGGATCAGAAAGGTCTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAgg > 1:195622/1‑251 (MQ=255) cTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGTCATCCAGGCGTGGTGGGATCTCGATGc > 2:94342/1‑251 (MQ=255) cTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGc > 1:138596/1‑251 (MQ=255) gcgtgcgCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCTGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTATCCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGGACCGATGTCACTGTTCGGGCACAAAGACACGGAAGAGCTTCATCCGCGTTCCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGc < 1:227712/249‑1 (MQ=255) gcgtgcgCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATg < 1:161682/248‑1 (MQ=255) cAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAag > 1:201653/1‑247 (MQ=255) cAGTCACTGAAAGAGAGTAAAGGCGTGCAGTGGATCCCGGACTGGGTCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGTCTGGTGTATCTCCCGGCAGCTCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAATACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGAt < 1:266843/251‑1 (MQ=255) agaTGAAAGGCGTGCAGTGGTTCCCGGACTGGGGCCAGGCGCGTATCGAGGCGATGGTGGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGAGACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAGCGCTGTGAAGTTAACGGCAGCCAGGCGTGGTGGGATCTCTATGCGAAATAGATCCTTGGT‑GACGaa < 2:182200/251‑1 (MQ=255) aTCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGAGGCGAAAGAGATCCTCGGC‑GACGAAGc < 1:152069/251‑1 (MQ=255) gCGTGCAGTGTGTCCCGGACTGGGTCCAGGTGCGTAGTGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTTGCTCCCGTCAGCGCTCCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGTAAGAAGTGGCAAAACGCGTGGAAGTCAACGGCATCCAGGTGTGGTGGGATCTCGATTCGAAAGATATCCTCGGC‑GACGAAGCTGACCA‑g < 1:330121/251‑1 (MQ=255) cAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTatgt < 1:59856/251‑4 (MQ=255) aGTGGATCACGGACTGGGTCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTAAGCGCACCTGTCGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAACCGCGTTGAAGTTCACGCCATCCAGGCGCGGTGGGATCTCGATGCGAAACACATCCCCGCc‑gacgagactgaccggtagc > 2:114788/1‑235 (MQ=255) ccGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGcc < 1:221693/251‑1 (MQ=255) cGGACTGGGGCCAGGGGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGGACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCg < 1:278266/251‑1 (MQ=255) cGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTTCCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTAGATGCGAAAGAGATCCTCGGC‑GACGAAGTTGACCA‑GTATGTGAA‑AGTGCCg < 1:137642/251‑1 (MQ=255) gACTGGGGCCAGGCGCGTATCGAGTTGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGa < 1:13802/251‑1 (MQ=255) gACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGa < 1:209828/251‑1 (MQ=255) gcgcGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGatactctcgacgt < 1:288056/251‑13 (MQ=255) gTATCGTGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTTGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGatactctcgacgtatgg < 1:228158/251‑17 (MQ=255) tctCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACCAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGCTGGAAGAAGTGGCAAAACGCGTTGAAGTTACCGGCATCCAGGCGTGGGGGGATCGCGTTGCGATAGAGATCCTCGGCAGA‑GAAGCTGACCA‑GTATGTGAA‑AGGGCCGGatactctcgaggtagggt > 2:282445/3‑234 (MQ=255) aGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGAc > 1:343441/1‑251 (MQ=255) cggtGGTTTCTAACCGTCCTGACTGGTGTCACTCCCTGCAGCGCACCTGGGGCGTACCGATGTCACTGGTCGGTCACAAAGACGCGGAAGAGCTGCATCCGCGTCCCCTCGAACTGATGGAATAAGTTGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACTAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTcc < 2:142012/248‑1 (MQ=255) gctggtttatatccGTCCTGACTTGTGTATCTCCCGTCAGCGCACCTGGGGTGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTTGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTCGATGGCATCCAGGCGTGGTGGGATCTCGATGCGACAGAGATCCTCGGC‑GACGAAGCTGATCA‑GTACGTGAA‑AGTGCCGGACACAT‑TGGCAGTATGGTTTGAATCCg > 2:251117/13‑251 (MQ=255) aaCCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTAcc < 1:43918/249‑1 (MQ=255) gACTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTTCCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCtg < 1:97079/250‑1 (MQ=255) cTGGTGTATCTCCCGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCC‑GTATGTGAA‑AGTGCCGGATACTC‑TCGCAGTATGGGTTGACTCCGGATCTACCCACTCTTCtgttg > 2:66719/1‑251 (MQ=255) cGTCAGCGCACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTcc < 1:130454/251‑1 (MQ=255) cgcACCTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAAtt < 1:9669/251‑1 (MQ=255) ccTGGGGCGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGcc > 2:88762/1‑251 (MQ=255) tGGGGCGTACCGCTGTCACTGTTCGTGCCCAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGCACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCACGGC‑GACGAAGCTGA‑CACGTATGTGTA‑AGAGCCGGATA‑ATCTCGACGTATGGGTTGACTACGGATCTACCCACTCTTCTGTTGTTGCCTTTCGTCCGGAATTTGCCgg > 2:200705/1‑251 (MQ=255) gtggcgtACCGATGTCACTGTTCGGGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGGGTGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGGATGGTTTGACTCCGGATCTACCCACTCTGCTGTTGTTGACGTGCGTCCGGAATTTGCCg < 1:151906/244‑1 (MQ=255) ggcgttccattttctcTGTACGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCATCGAACTGATGGAAGAATTGGCAAAACGAGTTGAAGTTAACGGCTTCCAGGTGTGGTGGGTTCTCGTTGCGAAATAGATCCGCGGA‑GACGAAGCTGACAA‑TTATGTGAA‑AGTGCCGGATGCTC‑TCGGCGTATGGTTTGACTTCGGATGTACTCACTCTTCTGTTTTTGTCGTGCGTCCGGAATTTGTCGGtta < 2:287993/236‑3 (MQ=255) gtACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGAGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAACAGT‑CCGGATACAC‑ACCAAGTATGGTTTGACTCCGGATCTACCACCTCTTATGTTGTTGACGGGCGTACGGCATTTGCCGGTCACGc > 2:338675/1‑251 (MQ=255) gtACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAAATGATGGCAGAAGTGGCAAAACGCGTTGCAGTTAACGGCATACAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑CGTGCCGGAGACTC‑TCGGCGAATGGTTTGACTCCGGATCTACCCACTCTTCTTTTGTTGACGTGCATCCGGAATTTGCCGGTctctc > 2:322366/1‑247 (MQ=255) tACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGc > 1:369161/1‑250 (MQ=255) cGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCg > 1:60791/1‑251 (MQ=255) cACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATg > 1:189274/1‑251 (MQ=255) gTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATc < 1:25955/251‑1 (MQ=255) cGTGCACAAAGACACGGAAGAGCTGCATCCGCGTAACCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCC‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTgg > 1:344671/1‑251 (MQ=255) ttcacaAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGACGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTTGTGGGATATCGATGCGAAAGAGATCCTCGGC‑GACGATGCTGACCA‑TAATGTGAA‑AGTGACGGATACTC‑TCGCCGTATGGTTTGACTCCGGATATACCCACTCTGCTGCTGTTGACGTGCGTCCGGAGTTTGCAGGTAACGCAGCGGAccagtatccggt > 2:265887/3‑239 (MQ=255) caAAGACACGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGGTGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGTCCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTGGACTCCGGATCTACCCACTCTTCTGTTGTTGACGGGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTACCTGGAAGGtt < 1:208257/251‑1 (MQ=255) cacGGAAGAGCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGAcc < 1:94342/251‑1 (MQ=255) agctgcatccgtgggacctcggagtGATGGAAGAATTGGCAAAATGCGCTGAAGGTAACGGCATCCAGGCTGGGTGTGAGCTCGCTGCGAAAGAGTTCCTCGTC‑GACGAAGCAGACCA‑GTATGTGAA‑AGTGCCGGAGACTC‑TCGACGTATTGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGAAGTGCGTCCGGAATTTGCCGTTCACGCAGCGGACATGTATCTGGAAGGTCCTGACCAGCACcgt < 2:305355/227‑2 (MQ=255) agCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTAACGCAGCGGACATGTATCTGGAAGGTTCTGAcccgcaccgt > 1:221614/1‑243 (MQ=255) gCTGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACcgtg < 1:312788/251‑3 (MQ=255) tGCATCCGCGTACCCTCGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACcgtggt > 1:170413/1‑247 (MQ=255) gcgTACCATTGAAATGATGGAAGAAGTGGAAAAAAGAGTTGAAGTAGATGGTATCAAGGAGTGGTGGGATATAGATGAGAAAGAGATAATAGGA‑GAAGAAGATGATCA‑GTAAGTGAA‑AGTGCAGGAAAAAT‑TGGATGTATGGTTTGAATACGGATATAAAAAATATTATGTTGTTGACGTGCGTACGGAATTTGCAGGTAACGCAGCGGACATGTATCTGGAAGGTTCTGACCAACACCGAGGCTGGTTCa < 1:251117/251‑1 (MQ=255) cgaaacctcgAACAGATGGAAGAAGTGGGAAAACGCTGTGAAGTTAACGGCATCCAGGCGTGGCGGGATCTCGATGCGAAATAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGGATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGGCCGGAATTTGCTGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACcgtggtttgttcga < 2:13978/242‑13 (MQ=255) gAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTCTTCCCt < 1:99796/251‑1 (MQ=255) tGATGGAAGAAGTGGCAAAACGCGTTGAAGTCGATGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GAAGAAGCTGATCA‑GTACGTGAA‑AGTGCCGGACACAT‑TGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAACACCGCGGCTGGTTCATGTCTTCCCTAATg > 1:229218/1‑251 (MQ=255) gATGGAAGAAGTGGCAAAACGCGTTGAAGTCGATGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGATCA‑GTACGTGAA‑AGTGCCGGACACAT‑TGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGTCATGTATCTGGAAGGTTCTGACCAACACCGCGGCTGGTTCATGTCTTCCCTAATGa < 1:16331/251‑1 (MQ=255) ggAAGAAGTGGCAAAACGCGTTGAATTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGATGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTCTTCCCTAATGAtct < 1:242797/251‑1 (MQ=255) gaagTGGCAAAACGCGTTGAAGTCGATGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTTATCA‑GTACGTGAA‑AGTGCCGGACACAT‑TGGATGTATGGTTTGACTACGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGGAGGTTCTGACCAACAACGCGGCTGGTTCATGTCTTCCCTAATGATCTCCAc < 1:156967/251‑1 (MQ=255) aCGCGTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTCTTCCCTAATGATCTCCACCGCGATGaa > 1:187875/1‑249 (MQ=255) cgcgTTGAAGTTAACGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGACCA‑GTATGTGAA‑AGTGCCGGATACTC‑TCGACGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAGCACCGTGGTTGGTTCATGTCTTCCCTAATGATCTCCACCGCGATGaaagg < 1:111146/251‑4 (MQ=255) gcgTTGAAGTTAACGGAATCCAGGCGTGGTGGGCTCTCGATGCGAAAGAGATCCTCGGC‑CACGAAGCTGACCA‑GTATGTAAA‑AGTGCCGGATACTC‑TAGAAGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGCAGGTTCTGACCAGCACCGTGGTTGGTTCATGTCTTCCCTAATGTTCTCCACCGCGCTGaaaggc > 1:377387/1‑247 (MQ=255) cgTTGAAGTTAACGGCATCCAGGTGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACTAAGCTGACTA‑GTATGTGAA‑AGTGCCTGATACTC‑TCGACGTATGGTTTGGCTTCGGATCTACCCTCTCTTCTGGTGTTGACGTGCGTCCGGAATTTGCTGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGAGCAGCACCGTGGTTGGTTCATGTCTTCCCTAATGATCTGCACCGCGATGaaaggca < 1:18002/251‑6 (MQ=255) || CAGCATGGATCAGAAAGGTCTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGTGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTTGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTCGATGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGC‑GACGAAGCTGATCA‑GTACGTGAA‑AGTGCCGGACACAT‑TGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAACACCGCGGCTGGTTCATGTCTTCCCTAATGATCTCCACCGCGATGAAGGGTA > NC_000913/23659‑24137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |