| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,631,323 | A→T | T197T (ACA→ACT) | slt → | soluble lytic murein transglycosylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,631,323 | 0 | A | T | 92.3% | 128.7 / 2.3 | 54 | T197T (ACA→ACT) | slt | soluble lytic murein transglycosylase |
| Reads supporting (aligned to +/- strand): ref base A (2/2); new base T (22/26); total (24/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01 | |||||||||||
AGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCGAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGA > NC_000913/4631089‑4631564 | aGCCTTTGGCCCGGAAAAGCCCGGAACTACAGAATCGCAATGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCTTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTg < 2:291028/250‑1 (MQ=255) ccGGAAAATACCGGAACTACCGAAGCGCAAGGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTTAAGAAGCATGGCAAGGGGCGAAAGAGCTGTGGCTACCCGGCAAGAGCCAGCCTAACTCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCTGATAACACTGGCCTGGTAACAGTGCTggcagggca < 2:82991/251‑1 (MQ=255) ccGAAGCGCAATGTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGCCAGGGCAGA‑TGCCTGCCGATTAcc > 1:164915/1‑249 (MQ=255) aTGTAATTACTTCTATGCTAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTTGCGTGCGTCAGGTACACAAGATCCGCTGGCGTATTTATAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGTCCTGGTCACAGTGCTGGCAGGTCAGA‑TGCCTGCCGATTACCAGACTATCGCCt < 1:11027/251‑1 (MQ=255) gTAATTACTACTATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCg > 1:26648/1‑251 (MQ=255) aTTACTACTATGCAAAATGGAACACCGGGCAGAGTGCAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGACAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGGAGAAAGCGGGTAACACTGGCCTGGTAAAAGTGCTGGCAGGGCAGG‑TGCCGGCCGCTTAcccgcaacgcgcctcggc > 2:206198/1‑234 (MQ=255) actactATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGCGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATc > 1:349986/1‑251 (MQ=255) actactATGCAAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATc < 1:206198/251‑1 (MQ=255) tGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCCGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGa > 1:376924/1‑250 (MQ=255) ggAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGaac < 1:255712/251‑1 (MQ=255) cgtgCAGAGTGACGAAGCCTGGCAAGGGTCGAAAGAGCTGGGGCCAACCGGCAAGAGCCAGCCTAACGCCTGTGACCAGTTATCTAGTGCCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCTTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTa < 1:142750/248‑1 (MQ=255) cGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCCGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTa < 1:64663/251‑1 (MQ=255) gaagaaGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTTACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGAGTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACt < 1:261298/251‑1 (MQ=255) gacTGGAAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATACGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCTCCTCGGCAATCCTTTCCC‑GGGCGCACAAACCTCATACGGTACTGACCtt > 2:94354/3‑251 (MQ=255) tGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTcgc > 1:169138/1‑251 (MQ=255) cAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTcgcgcg > 1:120966/1‑251 (MQ=255) aGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGtc > 1:75683/1‑250 (MQ=255) cGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGCAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACt < 1:122833/251‑1 (MQ=255) agCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGcgcg < 1:349924/251‑1 (MQ=255) tggggCTAACCGGCAAGGGCCAGCCTAACGCCTGTGACAAGTTATTTATTGTCGGGCGTGCGTCAGGTAAACAAGACCCGCTGGCGTATTTAGAACGTAGCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGGCCTGACCTTCGCGCGTACAACTGGCGCGAc < 2:159138/247‑1 (MQ=255) gtgGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGTCCTTCGCGCGTACAACTGGCGCGACCg < 1:129666/251‑1 (MQ=255) tAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGAtttt > 1:194175/1‑251 (MQ=255) aaCCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAAAAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGAtttt > 1:343820/1‑250 (MQ=255) aaCCGGCAAAAGCCAGCCCAACGCCTTGGACAAGTTATTTAGTGTCGGGCGGGCGTCAGGTAAACAAGATCCGCGGGCTGATTTATAGCTTATCCGTCTGGCGATGAAAGCGGGGAACACTGGCCTGGTAACAGTGCTTGCAGTGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGCCCTTCGCGCGTACAACGGGCGCGACCGAttt < 2:349986/249‑1 (MQ=255) aaGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTc > 1:17810/1‑250 (MQ=255) ccagccTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATgg < 1:207198/251‑1 (MQ=255) cagccTAACGCCTGTGACAAGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTAATGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCAGTAAAATggg > 1:183241/1‑250 (MQ=255) gtgtccaGTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCAGATGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCATGCCGATTACCAGACCATCGCCTCGGCAATGATTT‑ACATGGCGACAAACCCTAATACGAGACTGAACTTCGAGCGGACAAAAGGGCCGACCGACTTTACCCATAACAAGGCGGCGGGGG‑Cggtt > 2:269706/7‑248 (MQ=255) gagACAAGTTAGTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGGATTTAGAGCGTATCCGTCTTGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGtt < 1:267385/248‑1 (MQ=255) gTTATTTAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAggg > 1:221872/1‑249 (MQ=255) tttAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGCGCGTATCCTGCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGAAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCCATCATTTCAC‑TGGCGACCAACCCTAATACGGGACTGACCTTCGCGCTTACAACTTACGCGACCGATTTTACCCGACAAATGGCGGGGGTgtggttttgcagcggtgg > 2:88202/1‑234 (MQ=255) tttAGTGTCTGGCGTGCGTCAGGAAAACAAGATCCGCTGGCGGATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAAAACTGGCCTGGAAACAGTGCTGGCAGGGAAGA‑TGCATGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACCACCCCAATCCGGTACTGACATTTGCGCATACAACTGGCGCCACCGATTTTAACCGTCAAATGGgggcggggggggtgggccatggggg > 2:247290/1‑232 (MQ=255) ttAGTGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGgc < 1:247290/250‑1 (MQ=255) agtgTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGcgcg < 1:354791/248‑1 (MQ=255) cgtCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGAAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTTGCGCGACCGATTTTACCCGTCAAAATGCGGCGGGGG‑CGGTTGCCCGAGAGGCGCggacgggaggctgg > 2:373046/1‑239 (MQ=255) gtCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGGGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTgagg > 1:60318/1‑250 (MQ=255) ggTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTAAAACTGGCGCGACCGATTTTACCCGGCAAATGGCGGCGGTGGGCGTT‑GCCAGTGGGGGGCGGGAgggagcgtggggtgg > 2:112680/1‑238 (MQ=255) aaaaaaagttCCGCCGGCGTATTTATAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACATTGCTTGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAAGACGGTACTGACCTGCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGGTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCAc < 2:376924/242‑1 (MQ=255) ggCGTTTTTAGTGCGTATCCGTCGGGCGATGAATGCGGGTAACACTTGCCTGGTATCAGTGCTGGCAGGGCAGA‑TGCCTTCCGATTACCAGACTATCGCCTCGTCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGTTGA‑TGATCCCAt < 2:324893/251‑1 (MQ=255) aTTTTGAGCGTTGCCGTCTGGCGATGCAAGCTGGTAACTCTGGTCTGGTAACATAGCTAGCAGGG‑TGACTGCCTGTAGCTTACCCGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACACGCATTCTGTACTGTCCATCGCGAGTTCAACTTGCGCGACCGATTTTACCCGTCAAATGGCGGCTGTGG‑CGTTTGCCAGTGTGGCGCGGCCGGATGCTGAGAATGCTCGTATGA‑TGATACCATCGcga < 2:93071/251‑3 (MQ=255) aTTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCGGAGGATGCAAGGGCGA‑TGATCCCATCGCtt > 1:237926/1‑251 (MQ=255) agagCTTATCCGGCTGGCGATTAAAGCGAGTAACTCTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATTCGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGTCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGcc < 1:205617/250‑1 (MQ=255) agagCGTATCCGTCTGGGGATGAAAGCGGGTAACCCTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACATCCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATTCACGGCTGA‑TGATCCCACCGCTTGccc < 2:75683/251‑1 (MQ=255) gCGTAGCCGTCTGTCGATGAAAGCGGGTAACCCTTGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCTGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACATCCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCTATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGCCCAgg < 2:130326/251‑1 (MQ=255) gaaTCCGTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAAAAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGAGG‑GGTGTTCACGTGTGGGGCGGAAGGGGGGTGAGCATGGACGGCTGAGTGA‑CCCACCGCTTGCCCaaggg > 2:82721/3‑247 (MQ=255) gTATCCGTCTGGCGATGAAAGCGGGAAACACTGGCCTGGTAACCGTGCTGGCAGGGCAGC‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGGGG‑CGCTTGCCAGGGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCACCGCTTGCCCAGgcg > 1:88144/1‑251 (MQ=255) gTATCCATCTGGCGAGGAAATCGGGTAACACTGTCCTGTGAACAGTGCTGGCAGGGCAGA‑TGCCTTCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACGGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGCCCAggag < 2:238817/251‑3 (MQ=255) acgactggctattataGCGGGTAACACTGGCCCGGTAACAGTGCTGGCAGGGCTAA‑TGCCTGCCGATTTCCAGACTCTCGCCTCCTCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAAGTGCTGCGGTGG‑CGTTTGCCAGTGTGGCGCTGCAGGATGCTGAGAAGGAACGGCTGA‑TGATCCCATAGCTTGCCTAGGCgcag < 2:298310/235‑1 (MQ=255) gTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGGATGCCCGGCTGA‑TGATCCCATCGCTTGCCCAGGCgcagc > 1:202499/1‑249 (MQ=255) gTCTGGCGATGAAAGCGGGTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGCCCAGGCGcagcag < 1:376041/251‑1 (MQ=255) tgtcgagtaaaGCGGGTAACACGGGCCTGGTAACAGGGCTGCCAGGGCAGA‑TGCTTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGGACAGCTGGCGCGACCGATTTTACCCGTCAAAGGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGCACAGTCGCAGCAGCt < 2:343820/242‑1 (MQ=255) aaGCGTGTAACACCGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTTCCATACTATCGCCACGGCAATCACTTCAC‑TGGCGAACAACCCTAAGACGGTACTTGCCTTCGCGCGTACAACTGGCGCGACCGATTTTGCCCGGCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCTGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGAt < 2:326113/251‑1 (MQ=255) gCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCAGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCa < 1:52998/251‑1 (MQ=255) gggTAACACTGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATGACCAGGCTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCGTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGCACAGGCGCAGCAGCTGAATGAAGATCAGa < 1:280385/251‑1 (MQ=255) | AGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCGAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGA‑TGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCAC‑TGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGG‑CGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGA‑TGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGA > NC_000913/4631089‑4631564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |